| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715519
Identifier: 119715519
GI number: 119715519
Start: 1358690
End: 1358971
Strand: Direct
Name: 119715519
Synonym: Noca_1283
Alternate gene names: NA
Gene position: 1358690-1358971 (Clockwise)
Preceding gene: 119715518
Following gene: 119715520
Centisome position: 27.25
GC content: 74.11
Gene sequence:
>282_bases ATGCCCGGCCCGCACTATCGTGCCCGCATGGTCGCCTTCCCCGTCGCCGGCGTGATCCTGGGCGTGCTCGCCCGGGTGCT CCACCACGACCCCGACGACCCCGGAGTGCCGATCACGCTCGTCCTCGGCGTCGTGGGTGCCGTGGTCGGCGGCGCGGCGA TGAACGCCGTGCTCGGGGATCCGCTGGGCGGCCTCGGGGCCTGGAGCTTCACCGCGGTCTGCTTGGTGTCGTTCGTGCTC CTCGGCCTGCTCGAGGGCGGCGTGGGACGCCGGCGCCCATGA
Upstream 100 bases:
>100_bases GACACCCAGCACTTCGACTACGTCGGCAGCCGGGCCCGGGCGGCCGTGGCGCCGCGGGCCTGCGACCGGTACTGCGACTG ACCTCGCACCATCGGCCACG
Downstream 100 bases:
>100_bases CCGACGGCTGCGTGTTCTGCGGGATCGTCGCGGGGGAGGTCCCGGCCGACCTGGTGCTCGAGGAGACCGAGGTCCTCGGG TTCCTCGACCGCCGCCCGCT
Product: transglycosylase-associated protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 92
Protein sequence:
>93_residues MPGPHYRARMVAFPVAGVILGVLARVLHHDPDDPGVPITLVLGVVGAVVGGAAMNAVLGDPLGGLGAWSFTAVCLVSFVL LGLLEGGVGRRRP
Sequences:
>Translated_93_residues MPGPHYRARMVAFPVAGVILGVLARVLHHDPDDPGVPITLVLGVVGAVVGGAAMNAVLGDPLGGLGAWSFTAVCLVSFVL LGLLEGGVGRRRP >Mature_92_residues PGPHYRARMVAFPVAGVILGVLARVLHHDPDDPGVPITLVLGVVGAVVGGAAMNAVLGDPLGGLGAWSFTAVCLVSFVLL GLLEGGVGRRRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9418; Mature: 9287
Theoretical pI: Translated: 8.55; Mature: 8.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGPHYRARMVAFPVAGVILGVLARVLHHDPDDPGVPITLVLGVVGAVVGGAAMNAVLGD CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC PLGGLGAWSFTAVCLVSFVLLGLLEGGVGRRRP CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure PGPHYRARMVAFPVAGVILGVLARVLHHDPDDPGVPITLVLGVVGAVVGGAAMNAVLGD CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC PLGGLGAWSFTAVCLVSFVLLGLLEGGVGRRRP CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA