Click here to switch to the map view.

The map label for this gene is cloSI [H]

Identifier: 119715517

GI number: 119715517

Start: 1355216

End: 1357189

Strand: Direct

Name: cloSI [H]

Synonym: Noca_1281

Alternate gene names: 119715517

Gene position: 1355216-1357189 (Clockwise)

Preceding gene: 119715514

Following gene: 119715518

Centisome position: 27.18

GC content: 71.63

Gene sequence:

>1974_bases
GTGGTGCCCCTCCTGACTGCGCGGTCGCCGCGCTCGCTGACCGCTGCCCTCGCCGTGCTCCTGCTGACCACCCTCGGCAC
CGCCGCCTGCACGGGCGGCTCCGACGGAGGCGACGACGAGCCCGCCGGCACCGCCGCCCACACCGGCCGCGAAGGCGACG
GCTGGACCGTCCTGCACTACTCGATGGCCGACACCAACCTCGAGCCGTTCATGGTGACCGACGTCAACGAGCTCGGCGCC
GTCGGCTCCCACGGCAACCTCCAGATCCGCGAGTTCATGGACCGGTCCGCGGAGTACGGCGAGGACGAGCTGCTCGACCA
GGGCAGCTGGGTGGGCGCGCGGGTGCTCGACCTCGGCCCCGACGGCAGCACCGAGGTCGTCGAGGACCTCGGCGACGTCG
ACTCGGCCGACCCCGAGGTGCTCGCGACGTTCATCGCCGACGGCATCGAGGCGCACCGCGCCGGCCACTACGCGCTGGTC
ATCTCCGACCACGGCTCCTCCTGGCCCGGCATCGGCCCCGACGAGGGCAGCGACTGGGACGTGCTCGATCTCGCCGAGAT
CACCGACGCCATCGCCACCGGCCTGGACCGCGCCGGTGTCGACAAGCTCGACCTGCTCGGCTTCGACGCCTGCCTGATGG
CCAACTTCGAGGTCGCCAGCGCCGTCGCGCCGCTCGCCGACCGCCTGGTCGCCTCCCAGGAGCTCGAGCCCGGCCACGGC
TGGGACTACGGCGCCCTGGGGCTGCTCGCCGAGGACCCGGACGCCACGGCCGACGACCTGGGCGCGGCGATCCTGGACGG
GTTCGCCGACCAGGCCGCCGACCAGGGCACCCAGGACCAGATCACGCTCGCGCTCATCGACCTGACGAAGATGGACGCCC
TCGACGAGGCCGTGTCCGGGTTCGCCGCCGCGATGGCCGAGGAGTCGACCGACGTCGCGCCCGCGGTCGGGCAGTCGGAG
GCGACCACCCTGGCCTTCGGCAAGAGCCCGGACGAGACCCAGGACAAGCACCTGAGCGACCTGGGCCAGCTCGCGGGCGC
GATCGGTGCGGCCGCCCCGGAGGTCGCCGACCAGGCCGATGCCGTCGTCACGGCGCTCGACGACGCCGTGCTCGAGACCG
TCGACGGCGTCGGGACCGCCGGCGCCACCGGGCTGTCGATCTACCTGCCGCCGGTGGCCGACCTCGCGGACCCGGCGTAC
CTCGATGTCGAGAGCTCCGCGGACTGGGCGGACTTCCTGGACGCCTACTACAGCGCCGGCGCCGCGATCCCGGCCGCCGA
GCAGCCGGCCTTCACCGATCCCGCCGAAGGGCCCGACGTCAGCTTCGACGACGACGGCAGCATCACGCTCACGGGCACCT
TCGACCCGGCGGCCCTGGGCAACATCACCGAGGCCACCATCAGCTACGCGCTGGTCAACGACGACGACTCGATCACCTAC
CTGGGCGAGGAGATCGCGGACTTCGACGACAGCGGATCCGCGCCCGAGGCGTCCGGCAACTACGACCTCACCGTGCTGCA
GATCGACGACGGCGAGGACTCCGCCTACGCCTACGTCCAGCTCGACCTCAGCGACGACCTGGGCACCGCGTTCTTCGACG
TCCCGCTGACCTACTACGCCTCGACCGACCCCGAGGGCACCGACCCGCAGGACGCGCTGCTCTCGCTGGTTCTCGACATC
GAGTCCGGCACGTTCGTCAGCGAGACCATCTACATCTACGACGAGCAGTCGGGCGGGTACGGCGAGCTCGCACCCGACCC
CGAGGGCATCATCGTCCCCGACGTGCTGACGATCGGTGCGGACGGCGAGCAGACCTGGGAGCCCACCTCCGATGTCGGGC
TGTACGCCGACATCGCGAACCTGACCTACGAGTTCGTGCCGCTCGACCCGGGCACGACCATCCAGGCCGACCTCACGCTC
TACGACTTCGGCGGCAACACCAGCACGCTCAGCAGCCTGGTCGAGGTCCCGTAG

Upstream 100 bases:

>100_bases
CGGTCCAGACATCCGCTCGGTCCGACGGTGTGCTCGTCGTGGTCGCCACCGGCGAGATCGGCGTTCGGCGGACGGCGCTC
GGCGCGGGCCCTAGCCTCGC

Downstream 100 bases:

>100_bases
GACCCTGCTGAACAACCCGCGCGGCGCCGGAGCCCGGCTCGAACCGAGGAGTAGCGGCCGCGAGCCTGGGCACGCTGACG
CTCATGCGTCTCGGACCCGC

Product: peptidase C11, clostripain

Products: NA

Alternate protein names: Clostridiopeptidase B [H]

Number of amino acids: Translated: 657; Mature: 657

Protein sequence:

>657_residues
MVPLLTARSPRSLTAALAVLLLTTLGTAACTGGSDGGDDEPAGTAAHTGREGDGWTVLHYSMADTNLEPFMVTDVNELGA
VGSHGNLQIREFMDRSAEYGEDELLDQGSWVGARVLDLGPDGSTEVVEDLGDVDSADPEVLATFIADGIEAHRAGHYALV
ISDHGSSWPGIGPDEGSDWDVLDLAEITDAIATGLDRAGVDKLDLLGFDACLMANFEVASAVAPLADRLVASQELEPGHG
WDYGALGLLAEDPDATADDLGAAILDGFADQAADQGTQDQITLALIDLTKMDALDEAVSGFAAAMAEESTDVAPAVGQSE
ATTLAFGKSPDETQDKHLSDLGQLAGAIGAAAPEVADQADAVVTALDDAVLETVDGVGTAGATGLSIYLPPVADLADPAY
LDVESSADWADFLDAYYSAGAAIPAAEQPAFTDPAEGPDVSFDDDGSITLTGTFDPAALGNITEATISYALVNDDDSITY
LGEEIADFDDSGSAPEASGNYDLTVLQIDDGEDSAYAYVQLDLSDDLGTAFFDVPLTYYASTDPEGTDPQDALLSLVLDI
ESGTFVSETIYIYDEQSGGYGELAPDPEGIIVPDVLTIGADGEQTWEPTSDVGLYADIANLTYEFVPLDPGTTIQADLTL
YDFGGNTSTLSSLVEVP

Sequences:

>Translated_657_residues
MVPLLTARSPRSLTAALAVLLLTTLGTAACTGGSDGGDDEPAGTAAHTGREGDGWTVLHYSMADTNLEPFMVTDVNELGA
VGSHGNLQIREFMDRSAEYGEDELLDQGSWVGARVLDLGPDGSTEVVEDLGDVDSADPEVLATFIADGIEAHRAGHYALV
ISDHGSSWPGIGPDEGSDWDVLDLAEITDAIATGLDRAGVDKLDLLGFDACLMANFEVASAVAPLADRLVASQELEPGHG
WDYGALGLLAEDPDATADDLGAAILDGFADQAADQGTQDQITLALIDLTKMDALDEAVSGFAAAMAEESTDVAPAVGQSE
ATTLAFGKSPDETQDKHLSDLGQLAGAIGAAAPEVADQADAVVTALDDAVLETVDGVGTAGATGLSIYLPPVADLADPAY
LDVESSADWADFLDAYYSAGAAIPAAEQPAFTDPAEGPDVSFDDDGSITLTGTFDPAALGNITEATISYALVNDDDSITY
LGEEIADFDDSGSAPEASGNYDLTVLQIDDGEDSAYAYVQLDLSDDLGTAFFDVPLTYYASTDPEGTDPQDALLSLVLDI
ESGTFVSETIYIYDEQSGGYGELAPDPEGIIVPDVLTIGADGEQTWEPTSDVGLYADIANLTYEFVPLDPGTTIQADLTL
YDFGGNTSTLSSLVEVP
>Mature_657_residues
MVPLLTARSPRSLTAALAVLLLTTLGTAACTGGSDGGDDEPAGTAAHTGREGDGWTVLHYSMADTNLEPFMVTDVNELGA
VGSHGNLQIREFMDRSAEYGEDELLDQGSWVGARVLDLGPDGSTEVVEDLGDVDSADPEVLATFIADGIEAHRAGHYALV
ISDHGSSWPGIGPDEGSDWDVLDLAEITDAIATGLDRAGVDKLDLLGFDACLMANFEVASAVAPLADRLVASQELEPGHG
WDYGALGLLAEDPDATADDLGAAILDGFADQAADQGTQDQITLALIDLTKMDALDEAVSGFAAAMAEESTDVAPAVGQSE
ATTLAFGKSPDETQDKHLSDLGQLAGAIGAAAPEVADQADAVVTALDDAVLETVDGVGTAGATGLSIYLPPVADLADPAY
LDVESSADWADFLDAYYSAGAAIPAAEQPAFTDPAEGPDVSFDDDGSITLTGTFDPAALGNITEATISYALVNDDDSITY
LGEEIADFDDSGSAPEASGNYDLTVLQIDDGEDSAYAYVQLDLSDDLGTAFFDVPLTYYASTDPEGTDPQDALLSLVLDI
ESGTFVSETIYIYDEQSGGYGELAPDPEGIIVPDVLTIGADGEQTWEPTSDVGLYADIANLTYEFVPLDPGTTIQADLTL
YDFGGNTSTLSSLVEVP

Specific function: Cysteine endopeptidase with strict specificity [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase C11 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014173
- InterPro:   IPR005077 [H]

Pfam domain/function: PF03415 Peptidase_C11 [H]

EC number: =3.4.22.8 [H]

Molecular weight: Translated: 68024; Mature: 68024

Theoretical pI: Translated: 3.26; Mature: 3.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVPLLTARSPRSLTAALAVLLLTTLGTAACTGGSDGGDDEPAGTAAHTGREGDGWTVLHY
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCEEEEEE
SMADTNLEPFMVTDVNELGAVGSHGNLQIREFMDRSAEYGEDELLDQGSWVGARVLDLGP
EECCCCCCCEEEECHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHCCCCCCCEEEEEECC
DGSTEVVEDLGDVDSADPEVLATFIADGIEAHRAGHYALVISDHGSSWPGIGPDEGSDWD
CCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCC
VLDLAEITDAIATGLDRAGVDKLDLLGFDACLMANFEVASAVAPLADRLVASQELEPGHG
EEHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCC
WDYGALGLLAEDPDATADDLGAAILDGFADQAADQGTQDQITLALIDLTKMDALDEAVSG
CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEHHHHHHHHHHHHH
FAAAMAEESTDVAPAVGQSEATTLAFGKSPDETQDKHLSDLGQLAGAIGAAAPEVADQAD
HHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
AVVTALDDAVLETVDGVGTAGATGLSIYLPPVADLADPAYLDVESSADWADFLDAYYSAG
HHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHCCCCCEEEECCCCCHHHHHHHHHHCC
AAIPAAEQPAFTDPAEGPDVSFDDDGSITLTGTFDPAALGNITEATISYALVNDDDSITY
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHCCCCEEEEEEEEECCCCCEEE
LGEEIADFDDSGSAPEASGNYDLTVLQIDDGEDSAYAYVQLDLSDDLGTAFFDVPLTYYA
HHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEEEECCCCCCEEEECCEEEEE
STDPEGTDPQDALLSLVLDIESGTFVSETIYIYDEQSGGYGELAPDPEGIIVPDVLTIGA
CCCCCCCCHHHHHHHHEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCCEEECCEEEECC
DGEQTWEPTSDVGLYADIANLTYEFVPLDPGTTIQADLTLYDFGGNTSTLSSLVEVP
CCCCCCCCCCCCEEEEEHHHCEEEEEECCCCCEEEEEEEEEECCCCHHHHHHHHCCC
>Mature Secondary Structure
MVPLLTARSPRSLTAALAVLLLTTLGTAACTGGSDGGDDEPAGTAAHTGREGDGWTVLHY
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCEEEEEE
SMADTNLEPFMVTDVNELGAVGSHGNLQIREFMDRSAEYGEDELLDQGSWVGARVLDLGP
EECCCCCCCEEEECHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHCCCCCCCEEEEEECC
DGSTEVVEDLGDVDSADPEVLATFIADGIEAHRAGHYALVISDHGSSWPGIGPDEGSDWD
CCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCC
VLDLAEITDAIATGLDRAGVDKLDLLGFDACLMANFEVASAVAPLADRLVASQELEPGHG
EEHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCC
WDYGALGLLAEDPDATADDLGAAILDGFADQAADQGTQDQITLALIDLTKMDALDEAVSG
CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEHHHHHHHHHHHHH
FAAAMAEESTDVAPAVGQSEATTLAFGKSPDETQDKHLSDLGQLAGAIGAAAPEVADQAD
HHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
AVVTALDDAVLETVDGVGTAGATGLSIYLPPVADLADPAYLDVESSADWADFLDAYYSAG
HHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHCCCCCEEEECCCCCHHHHHHHHHHCC
AAIPAAEQPAFTDPAEGPDVSFDDDGSITLTGTFDPAALGNITEATISYALVNDDDSITY
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHCCCCEEEEEEEEECCCCCEEE
LGEEIADFDDSGSAPEASGNYDLTVLQIDDGEDSAYAYVQLDLSDDLGTAFFDVPLTYYA
HHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEEEECCCCCCEEEECCEEEEE
STDPEGTDPQDALLSLVLDIESGTFVSETIYIYDEQSGGYGELAPDPEGIIVPDVLTIGA
CCCCCCCCHHHHHHHHEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCCEEECCEEEECC
DGEQTWEPTSDVGLYADIANLTYEFVPLDPGTTIQADLTLYDFGGNTSTLSSLVEVP
CCCCCCCCCCCCEEEEEHHHCEEEEEECCCCCEEEEEEEEEECCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8341259; 6391922; 6337850 [H]