| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715495
Identifier: 119715495
GI number: 119715495
Start: 1332360
End: 1334564
Strand: Reverse
Name: 119715495
Synonym: Noca_1259
Alternate gene names: NA
Gene position: 1334564-1332360 (Counterclockwise)
Preceding gene: 119715497
Following gene: 119715487
Centisome position: 26.77
GC content: 76.1
Gene sequence:
>2205_bases ATGCCCCCACGCCGCTACCCCGCGCTCGCCCTGCCCGTCGTGATCGCGCTGGGCCTGGGTGCGGTGACGCTCGGCCCCGC CGCCGACCCCGGTTCGGGTCCGGCGGGGCGGGTCGGCGCGCCGGCGGCCGTGACGAGCGACGACCTGCCGGCGGGATCGG TCGTGGCCGACGAGCGGATCGAGCAGCTGGTGCGCTCCGGTGACCGGATCTACGCCCACGGCTGGTTCTCCACCGTCGGT CGGTACGCCGGACCCGGCACCGCGCTCGACACCGCGACCGGAGCCGACGCCGCGAGTCCGCGGATCGCCGACGGCCAGGT CTCGGTCGCGCTCGCCGACGGGTCGGGCGGCTGGTACCTCGGCGGTGACTTCACCCGGATCGGCGGCCGGGCCGCCGGCG GGCTGGCGCACGTGCGCGCGGACGGCAGTCTCGACAGCGGCTTCCTCCCGGTCGCCGACGGCCTGGTCAGCGCGCTGGCG CTGGACGGCGACACGCTCTACGCCGGCGGGATCTTCGAGTCGATCGACGGGGTGTCCCGCCACCACCTGGCGGCCCTCGC CACCGACGACGGCGCGGTGTCCGACTTCGACGCGCCCCAGGCGAAGCGGGTCACCGAGCTCGTGCTCGCCCCGGCGGCCG GAGACCGCTCGGCGCGGCTGTTCGTGGCCGCGGAGAATGTCTCCGCGGTGGACCCCGCCTCCGGCGACCCGGTCGCGGGC TTCGCCGCCGCCGTCGACGAGCCGGTGCGCGCGATGACCCTGGGCGCCGACCGCCTCTACGTCGGCGGCGCGGGGCTGGC CGCCCTCGACGCCTCCACCGGCGCGGTCGACCCGGGCTTCGCGCCCGACCTCGGCGGCCCGGCCGGCCCGCCCTTCGACC GCCGGGTGCACGCGCTCCTCTACACCGGGGGCCGGCTCTACGTCGGCGGTGACCTGGCGGCCGGCCGCCTGGTCGCGCTG GATCCCGCCAGCGGGGCGGTCGACCCCGCGTTCGCGCCCGCGATCCCGGCCGAGCGCAACGCGGTCGGCGTGCCCGCGGG GGTCTACGACCTCGCGCTCGAGGGCGACCGGCTCTGGGCCGCGGGCAGCTTCACCACCGTGGCCGGGCAGCCGGCCGGCG GCCTCGCCGTGCTGGACGCCACGACCGGCGCGCCGACCGGCCCCGCGGTGCCGTCGTACGACCTGCAGGCGAACACGGTC GAGCTCTCCGGCGGCCACGCCTACGTCGGGGGGCACTTCTACCTGAGCGACTTCGTGCGGACCGAGGGCATCGCCGCGCT GGACGCCGACACGCTCGAGCCGATGCCCGGCTTCGCGGTGCCGGACCGCGCCTACGGCGACCTGCTGGTCGGCCGGACCG CGCTGTTCGTGGCACCGACGCACTTCCTCGGCTACGACCCGTCGCCCGCGGCCGCCCAGAGCCACCAGTTCTACTCGCAG TGGGACTGGTGGATCCGCGCCTTCGACCGCGACACCGGCGCAGAGCTGCCGGGCCGGTCCCTGCAGGTCAGCGACCTGAC CGGCGTCACGACGATCGGCAACCGGCTCTACGTGGCCCGTCGGATGCAGGACGACGTCCGGTTCCCGCGCAACCAGATCG AGGTCTACGGCGCGTCCGGCAAGCGGGTGGCGATCTACCCGCTGCCGCTGCGCGGCTACGTCACCGAGCTCGACAGCATC GACGGCGACCTGGTCGCCGCGGGCAGCTTCAAGCGTCGCACCCGTGCGGGCGGCCCGCGGAACACGGCGATCCTGCGGCT GGACCGGCGCACCGGCGAGCGACGGCCGGCGTTCGACCCCCGGATCGAGGGTCCGGTGTACGACGTCGCCTCCGCCGGCC GGTCGCTGTTCGCAGCGGGGCTGTTCACCCGGGTGCTGCAGGGACCGGATCTCGCCAGCCCCGGTCTGACCCGACTGGAC GCCCGGTCGCGCCGCGACCCTTCCTTCGCCCCGGGACCCTTCGCCGGCGACCGGGTGCTGCTCCGGGTCAGTCCGCTCGG CCGGCTGCTCTGGGTCGACGGAGGCTCGACCCCCTTCCTCGACGCGGCCACCGGCACGGTCGCACCCGATCCCACGGATG GCTGGGCCGACCGGGTCCAGTCGATCACCGGCACCGACGGCGCGCTCGCATTCACGTCGTGGATCGAGCCGAACCTCGGC GGTCGCGACCCGTACCGGCTGGGTTTCGTGGCCCCGGTCGGCTGA
Upstream 100 bases:
>100_bases GGTCGGTCATGCGTCCCTCCCGGATCATGGGCTAGACCGTCTGGGCCAATCCCCACGGTAAGCCTCACCCCCGGGGTGCT GTCGAATTACGTTCCGGGCC
Downstream 100 bases:
>100_bases CCCGAGCGGCTCACCGCTCGGGCACCACGACCGCCGACCCGGAGGCGCCGATGACGGCGACCTCTGGCGAGCCGGGGACC GTGAGCGGCAGGTCCAGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: RHS Repeat Family; Ig Family Protein
Number of amino acids: Translated: 734; Mature: 733
Protein sequence:
>734_residues MPPRRYPALALPVVIALGLGAVTLGPAADPGSGPAGRVGAPAAVTSDDLPAGSVVADERIEQLVRSGDRIYAHGWFSTVG RYAGPGTALDTATGADAASPRIADGQVSVALADGSGGWYLGGDFTRIGGRAAGGLAHVRADGSLDSGFLPVADGLVSALA LDGDTLYAGGIFESIDGVSRHHLAALATDDGAVSDFDAPQAKRVTELVLAPAAGDRSARLFVAAENVSAVDPASGDPVAG FAAAVDEPVRAMTLGADRLYVGGAGLAALDASTGAVDPGFAPDLGGPAGPPFDRRVHALLYTGGRLYVGGDLAAGRLVAL DPASGAVDPAFAPAIPAERNAVGVPAGVYDLALEGDRLWAAGSFTTVAGQPAGGLAVLDATTGAPTGPAVPSYDLQANTV ELSGGHAYVGGHFYLSDFVRTEGIAALDADTLEPMPGFAVPDRAYGDLLVGRTALFVAPTHFLGYDPSPAAAQSHQFYSQ WDWWIRAFDRDTGAELPGRSLQVSDLTGVTTIGNRLYVARRMQDDVRFPRNQIEVYGASGKRVAIYPLPLRGYVTELDSI DGDLVAAGSFKRRTRAGGPRNTAILRLDRRTGERRPAFDPRIEGPVYDVASAGRSLFAAGLFTRVLQGPDLASPGLTRLD ARSRRDPSFAPGPFAGDRVLLRVSPLGRLLWVDGGSTPFLDAATGTVAPDPTDGWADRVQSITGTDGALAFTSWIEPNLG GRDPYRLGFVAPVG
Sequences:
>Translated_734_residues MPPRRYPALALPVVIALGLGAVTLGPAADPGSGPAGRVGAPAAVTSDDLPAGSVVADERIEQLVRSGDRIYAHGWFSTVG RYAGPGTALDTATGADAASPRIADGQVSVALADGSGGWYLGGDFTRIGGRAAGGLAHVRADGSLDSGFLPVADGLVSALA LDGDTLYAGGIFESIDGVSRHHLAALATDDGAVSDFDAPQAKRVTELVLAPAAGDRSARLFVAAENVSAVDPASGDPVAG FAAAVDEPVRAMTLGADRLYVGGAGLAALDASTGAVDPGFAPDLGGPAGPPFDRRVHALLYTGGRLYVGGDLAAGRLVAL DPASGAVDPAFAPAIPAERNAVGVPAGVYDLALEGDRLWAAGSFTTVAGQPAGGLAVLDATTGAPTGPAVPSYDLQANTV ELSGGHAYVGGHFYLSDFVRTEGIAALDADTLEPMPGFAVPDRAYGDLLVGRTALFVAPTHFLGYDPSPAAAQSHQFYSQ WDWWIRAFDRDTGAELPGRSLQVSDLTGVTTIGNRLYVARRMQDDVRFPRNQIEVYGASGKRVAIYPLPLRGYVTELDSI DGDLVAAGSFKRRTRAGGPRNTAILRLDRRTGERRPAFDPRIEGPVYDVASAGRSLFAAGLFTRVLQGPDLASPGLTRLD ARSRRDPSFAPGPFAGDRVLLRVSPLGRLLWVDGGSTPFLDAATGTVAPDPTDGWADRVQSITGTDGALAFTSWIEPNLG GRDPYRLGFVAPVG >Mature_733_residues PPRRYPALALPVVIALGLGAVTLGPAADPGSGPAGRVGAPAAVTSDDLPAGSVVADERIEQLVRSGDRIYAHGWFSTVGR YAGPGTALDTATGADAASPRIADGQVSVALADGSGGWYLGGDFTRIGGRAAGGLAHVRADGSLDSGFLPVADGLVSALAL DGDTLYAGGIFESIDGVSRHHLAALATDDGAVSDFDAPQAKRVTELVLAPAAGDRSARLFVAAENVSAVDPASGDPVAGF AAAVDEPVRAMTLGADRLYVGGAGLAALDASTGAVDPGFAPDLGGPAGPPFDRRVHALLYTGGRLYVGGDLAAGRLVALD PASGAVDPAFAPAIPAERNAVGVPAGVYDLALEGDRLWAAGSFTTVAGQPAGGLAVLDATTGAPTGPAVPSYDLQANTVE LSGGHAYVGGHFYLSDFVRTEGIAALDADTLEPMPGFAVPDRAYGDLLVGRTALFVAPTHFLGYDPSPAAAQSHQFYSQW DWWIRAFDRDTGAELPGRSLQVSDLTGVTTIGNRLYVARRMQDDVRFPRNQIEVYGASGKRVAIYPLPLRGYVTELDSID GDLVAAGSFKRRTRAGGPRNTAILRLDRRTGERRPAFDPRIEGPVYDVASAGRSLFAAGLFTRVLQGPDLASPGLTRLDA RSRRDPSFAPGPFAGDRVLLRVSPLGRLLWVDGGSTPFLDAATGTVAPDPTDGWADRVQSITGTDGALAFTSWIEPNLGG RDPYRLGFVAPVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75545; Mature: 75414
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPRRYPALALPVVIALGLGAVTLGPAADPGSGPAGRVGAPAAVTSDDLPAGSVVADERI CCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHH EQLVRSGDRIYAHGWFSTVGRYAGPGTALDTATGADAASPRIADGQVSVALADGSGGWYL HHHHHCCCEEEEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEE GGDFTRIGGRAAGGLAHVRADGSLDSGFLPVADGLVSALALDGDTLYAGGIFESIDGVSR CCCEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHEECCCEEEECCHHHHHCCCCH HHLAALATDDGAVSDFDAPQAKRVTELVLAPAAGDRSARLFVAAENVSAVDPASGDPVAG HEEEEEECCCCCCCCCCCCHHHHHHHEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCHH FAAAVDEPVRAMTLGADRLYVGGAGLAALDASTGAVDPGFAPDLGGPAGPPFDRRVHALL HHHHHCCCCEEEEECCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHEEEEEE YTGGRLYVGGDLAAGRLVALDPASGAVDPAFAPAIPAERNAVGVPAGVYDLALEGDRLWA EECCEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEE AGSFTTVAGQPAGGLAVLDATTGAPTGPAVPSYDLQANTVELSGGHAYVGGHFYLSDFVR CCCEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCEEEECCEEEEHHHHH TEGIAALDADTLEPMPGFAVPDRAYGDLLVGRTALFVAPTHFLGYDPSPAAAQSHQFYSQ HCCCEEECCCCCCCCCCCCCCCCCCCCHHHCCEEEEEECHHHCCCCCCCCHHHCCHHHHH WDWWIRAFDRDTGAELPGRSLQVSDLTGVTTIGNRLYVARRMQDDVRFPRNQIEVYGASG HHHHHEEECCCCCCCCCCCEEEECCCCCEEECCCEEEEEHHHHHHHCCCCCEEEEEECCC KRVAIYPLPLRGYVTELDSIDGDLVAAGSFKRRTRAGGPRNTAILRLDRRTGERRPAFDP CEEEEEECCCHHHHHHHHCCCCCEEECCCCHHHHCCCCCCCEEEEEEECCCCCCCCCCCC RIEGPVYDVASAGRSLFAAGLFTRVLQGPDLASPGLTRLDARSRRDPSFAPGPFAGDRVL CCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCEEE LRVSPLGRLLWVDGGSTPFLDAATGTVAPDPTDGWADRVQSITGTDGALAFTSWIEPNLG EEECCCCEEEEECCCCCCEEECCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCC GRDPYRLGFVAPVG CCCCEEEEEEECCC >Mature Secondary Structure PPRRYPALALPVVIALGLGAVTLGPAADPGSGPAGRVGAPAAVTSDDLPAGSVVADERI CCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHH EQLVRSGDRIYAHGWFSTVGRYAGPGTALDTATGADAASPRIADGQVSVALADGSGGWYL HHHHHCCCEEEEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEE GGDFTRIGGRAAGGLAHVRADGSLDSGFLPVADGLVSALALDGDTLYAGGIFESIDGVSR CCCEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHEECCCEEEECCHHHHHCCCCH HHLAALATDDGAVSDFDAPQAKRVTELVLAPAAGDRSARLFVAAENVSAVDPASGDPVAG HEEEEEECCCCCCCCCCCCHHHHHHHEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCHH FAAAVDEPVRAMTLGADRLYVGGAGLAALDASTGAVDPGFAPDLGGPAGPPFDRRVHALL HHHHHCCCCEEEEECCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHEEEEEE YTGGRLYVGGDLAAGRLVALDPASGAVDPAFAPAIPAERNAVGVPAGVYDLALEGDRLWA EECCEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEE AGSFTTVAGQPAGGLAVLDATTGAPTGPAVPSYDLQANTVELSGGHAYVGGHFYLSDFVR CCCEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCEEEECCEEEEHHHHH TEGIAALDADTLEPMPGFAVPDRAYGDLLVGRTALFVAPTHFLGYDPSPAAAQSHQFYSQ HCCCEEECCCCCCCCCCCCCCCCCCCCHHHCCEEEEEECHHHCCCCCCCCHHHCCHHHHH WDWWIRAFDRDTGAELPGRSLQVSDLTGVTTIGNRLYVARRMQDDVRFPRNQIEVYGASG HHHHHEEECCCCCCCCCCCEEEECCCCCEEECCCEEEEEHHHHHHHCCCCCEEEEEECCC KRVAIYPLPLRGYVTELDSIDGDLVAAGSFKRRTRAGGPRNTAILRLDRRTGERRPAFDP CEEEEEECCCHHHHHHHHCCCCCEEECCCCHHHHCCCCCCCEEEEEEECCCCCCCCCCCC RIEGPVYDVASAGRSLFAAGLFTRVLQGPDLASPGLTRLDARSRRDPSFAPGPFAGDRVL CCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCEEE LRVSPLGRLLWVDGGSTPFLDAATGTVAPDPTDGWADRVQSITGTDGALAFTSWIEPNLG EEECCCCEEEEECCCCCCEEECCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCC GRDPYRLGFVAPVG CCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA