| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715458
Identifier: 119715458
GI number: 119715458
Start: 1294591
End: 1295073
Strand: Reverse
Name: 119715458
Synonym: Noca_1222
Alternate gene names: NA
Gene position: 1295073-1294591 (Counterclockwise)
Preceding gene: 119715459
Following gene: 119715453
Centisome position: 25.97
GC content: 69.77
Gene sequence:
>483_bases ATGTCGCGCCGTCTCACCCACCAGATGACCTACGCCGCGCCCCTGGCGCAGGTCGTCGAGATGCTCGCCGACCCCCGCTT CCGGGAGGGGGTCTGCGAGTACCAACGGGTCGTCAGCGCCGACGTCGAGATCGACCGGTCCGGCGACGCGATGACCGTCC TGATCGAGCAGGTTCAGCCGGCCGCGGGGATCCCGTCGTTCGCGAAGAAGTTCGTCGGCGACGAGATCCGGATCGTGCAG CGCGAGGACTGGTCCGCCCCCGATACCGCCGAGCTGCACGTCACGATCCCGGGCAAGCCGGGGCACATGGACGGCACCAT CACCCTCGTGGAGTCCGGCGGGACCACCGTCGAGACGGTCGACGTGGAGATCCGGGTGAACCTGCCGCTGGTCGGCGGCA AGATCGAGGGGCTGGTCTCCGACCTGCTCCGCAAGGCCCTGGTGGCCGAGGAGAAGGTCGGCGCCCGCTACCTGTCGGCG TGA
Upstream 100 bases:
>100_bases CGCTCATCGGCGGCAAGCTCGAGCACCTGCTCGCCGACAAGGTCACCGCCGGGATGGACGCCGAGCACGGCGTCGGCGTC GAGTACCTCGCGGGCCGCTG
Downstream 100 bases:
>100_bases CCGCCGGCGTGACTGCCGGCGTGACTGCCGACGCGACTGTCGGTCTGGCTGGTCGCGGTGCTCTCGGTCCGGGCGTCCTC GCGACGGTCGGCGCGCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MSRRLTHQMTYAAPLAQVVEMLADPRFREGVCEYQRVVSADVEIDRSGDAMTVLIEQVQPAAGIPSFAKKFVGDEIRIVQ REDWSAPDTAELHVTIPGKPGHMDGTITLVESGGTTVETVDVEIRVNLPLVGGKIEGLVSDLLRKALVAEEKVGARYLSA
Sequences:
>Translated_160_residues MSRRLTHQMTYAAPLAQVVEMLADPRFREGVCEYQRVVSADVEIDRSGDAMTVLIEQVQPAAGIPSFAKKFVGDEIRIVQ REDWSAPDTAELHVTIPGKPGHMDGTITLVESGGTTVETVDVEIRVNLPLVGGKIEGLVSDLLRKALVAEEKVGARYLSA >Mature_159_residues SRRLTHQMTYAAPLAQVVEMLADPRFREGVCEYQRVVSADVEIDRSGDAMTVLIEQVQPAAGIPSFAKKFVGDEIRIVQR EDWSAPDTAELHVTIPGKPGHMDGTITLVESGGTTVETVDVEIRVNLPLVGGKIEGLVSDLLRKALVAEEKVGARYLSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17399; Mature: 17268
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRLTHQMTYAAPLAQVVEMLADPRFREGVCEYQRVVSADVEIDRSGDAMTVLIEQVQP CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEECCCCCEEEEHEEHHCC AAGIPSFAKKFVGDEIRIVQREDWSAPDTAELHVTIPGKPGHMDGTITLVESGGTTVETV CCCCHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCEEEEE DVEIRVNLPLVGGKIEGLVSDLLRKALVAEEKVGARYLSA EEEEEEECEEECCHHHHHHHHHHHHHHHHHHHHCHHHCCC >Mature Secondary Structure SRRLTHQMTYAAPLAQVVEMLADPRFREGVCEYQRVVSADVEIDRSGDAMTVLIEQVQP CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEECCCCCEEEEHEEHHCC AAGIPSFAKKFVGDEIRIVQREDWSAPDTAELHVTIPGKPGHMDGTITLVESGGTTVETV CCCCHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCEEEEE DVEIRVNLPLVGGKIEGLVSDLLRKALVAEEKVGARYLSA EEEEEEECEEECCHHHHHHHHHHHHHHHHHHHHCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA