| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715452
Identifier: 119715452
GI number: 119715452
Start: 1289071
End: 1290399
Strand: Reverse
Name: 119715452
Synonym: Noca_1216
Alternate gene names: NA
Gene position: 1290399-1289071 (Counterclockwise)
Preceding gene: 119715453
Following gene: 119715449
Centisome position: 25.88
GC content: 70.28
Gene sequence:
>1329_bases TTGTCTCCTGACGGCATCACCCTCGCGCACGGGATCGGTGGCGCGAAGGACCTCCCGATCTCGCCGGAGCTGGCGATCGC GGGAGCCAGCGCCGCCCTAGTCGTCTCCTTCACGGTCCTGGCGGTCGCCTGGCGCACCCCGCGGTACGACGCGGCCACCA GCGGCCGGCCGGCGCCGACGCTGCTCGGCCGGCTGGTCGACTCCACCGGCTGGCGGGTCGCCTGCCGGGTGTTCGGCATG GTGGTCTTCCTCTGGGCCGCGATGGCCGCCGTGTTCGGCAAGGACCTGGTGATCAACCCGATCTTCGGGATCTTCTACGT GTGGTGGTGGGTCGGCCTGGTCCCGCTGTCGGTGCTGCTCGGCCCGGTGTGGAAGGCGATCAGCCCGGCCCGGACCATCA ACCTGGCGTTCGCGAAGGTCTCCGGCAGCGACCCGGACCGCGGGCTGCTGACCTACCCCGACCGACTCGGCTACTGGCCG GCCGCGCTCGGCCTGTTCGCGTTCGTGTGGATGGAGCTCGTCTACCCGTTCTCCACCGAGCTCGGGCCGGTCCGGCTGTG GTGTGCGGCGTACGTCGCGGTGATGCTGGTCGGCGGCGCGCTGTTCGGCACCACGTTCTACGAGCGCGCCGACCCGTTCG AGGTCTACTCCACCCTGGTCTCCCGGCTCTCGGTGTGGGGCCGGCGCGGTGACCTGCTGGTGGTCCGCAGCCCGCTGGCG AACCTGGACACGACGCCGGCCCGCCCGGGGCTGGTGGCGGTGGTCGCGGTCCTGTTCGGCAGCACGGCGTTCGACTCGTT CAAGGACTCCACCCGGTGGCTGTCCTTCGTGCAGTCCACCGACACCTCGTCGTACCTGCTGAACAACCTGGCGCTGCTGG CGTTCTGCGTCGGCGTCGGCCTGGTGTTCGTGGTCGGCTGCGTGCTCACCGGGCTCGGTGACGACCTGCGCCGCCGCGAG CTGCCGAACCTGCTGGCGCACTCGGTGGTGCCGATCATCGTCGGCTACATCATCGCCCACTACCTGCGCTACCTCGTCGA GGTCGGCCAGCTGACGCTGGTGCAGGCGAGCGACCCGTTCAGCGACGGCAGCAACTACCTGGGGACGGGGAACTTGGACC CGGTCTACTGGTTGGCCTACCACCCCACGTTCCTGGCGAACGTCAAGGTGCTCGCGGTGGTCGTCGGGCACGTGCTGGGC GTGATCGCGGCCCACGACCGGGCGATCAAGATCCTGCCGCCGCGGCACCAGCTGACCGGTCAGCTGCCGCTGCTGTTCGC GATGGTGGCGTTCACCGTCGGCGGGCTCTACCTGCTGTTCGCGGCCTGA
Upstream 100 bases:
>100_bases GACCATCAAGGGCATCGACAAGCCGGGCACGGTCGACGTCGAGTCGCACAACCTCGAGAAGGTCATCGTCCAGCTCGAGG TCCGATGAGGGCCTGCTGAG
Downstream 100 bases:
>100_bases GCCTGCGCCCGCCGAGCACCGGGCGCCGGGAGGTCCGCCGGTGCGCCGGTCGAGCCCCGCGGCGACAGGGCGTCCACGAG CCGCGCGACCGCCCGGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 442; Mature: 441
Protein sequence:
>442_residues MSPDGITLAHGIGGAKDLPISPELAIAGASAALVVSFTVLAVAWRTPRYDAATSGRPAPTLLGRLVDSTGWRVACRVFGM VVFLWAAMAAVFGKDLVINPIFGIFYVWWWVGLVPLSVLLGPVWKAISPARTINLAFAKVSGSDPDRGLLTYPDRLGYWP AALGLFAFVWMELVYPFSTELGPVRLWCAAYVAVMLVGGALFGTTFYERADPFEVYSTLVSRLSVWGRRGDLLVVRSPLA NLDTTPARPGLVAVVAVLFGSTAFDSFKDSTRWLSFVQSTDTSSYLLNNLALLAFCVGVGLVFVVGCVLTGLGDDLRRRE LPNLLAHSVVPIIVGYIIAHYLRYLVEVGQLTLVQASDPFSDGSNYLGTGNLDPVYWLAYHPTFLANVKVLAVVVGHVLG VIAAHDRAIKILPPRHQLTGQLPLLFAMVAFTVGGLYLLFAA
Sequences:
>Translated_442_residues MSPDGITLAHGIGGAKDLPISPELAIAGASAALVVSFTVLAVAWRTPRYDAATSGRPAPTLLGRLVDSTGWRVACRVFGM VVFLWAAMAAVFGKDLVINPIFGIFYVWWWVGLVPLSVLLGPVWKAISPARTINLAFAKVSGSDPDRGLLTYPDRLGYWP AALGLFAFVWMELVYPFSTELGPVRLWCAAYVAVMLVGGALFGTTFYERADPFEVYSTLVSRLSVWGRRGDLLVVRSPLA NLDTTPARPGLVAVVAVLFGSTAFDSFKDSTRWLSFVQSTDTSSYLLNNLALLAFCVGVGLVFVVGCVLTGLGDDLRRRE LPNLLAHSVVPIIVGYIIAHYLRYLVEVGQLTLVQASDPFSDGSNYLGTGNLDPVYWLAYHPTFLANVKVLAVVVGHVLG VIAAHDRAIKILPPRHQLTGQLPLLFAMVAFTVGGLYLLFAA >Mature_441_residues SPDGITLAHGIGGAKDLPISPELAIAGASAALVVSFTVLAVAWRTPRYDAATSGRPAPTLLGRLVDSTGWRVACRVFGMV VFLWAAMAAVFGKDLVINPIFGIFYVWWWVGLVPLSVLLGPVWKAISPARTINLAFAKVSGSDPDRGLLTYPDRLGYWPA ALGLFAFVWMELVYPFSTELGPVRLWCAAYVAVMLVGGALFGTTFYERADPFEVYSTLVSRLSVWGRRGDLLVVRSPLAN LDTTPARPGLVAVVAVLFGSTAFDSFKDSTRWLSFVQSTDTSSYLLNNLALLAFCVGVGLVFVVGCVLTGLGDDLRRREL PNLLAHSVVPIIVGYIIAHYLRYLVEVGQLTLVQASDPFSDGSNYLGTGNLDPVYWLAYHPTFLANVKVLAVVVGHVLGV IAAHDRAIKILPPRHQLTGQLPLLFAMVAFTVGGLYLLFAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47687; Mature: 47556
Theoretical pI: Translated: 8.55; Mature: 8.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPDGITLAHGIGGAKDLPISPELAIAGASAALVVSFTVLAVAWRTPRYDAATSGRPAPT CCCCCEEEECCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH LLGRLVDSTGWRVACRVFGMVVFLWAAMAAVFGKDLVINPIFGIFYVWWWVGLVPLSVLL HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH GPVWKAISPARTINLAFAKVSGSDPDRGLLTYPDRLGYWPAALGLFAFVWMELVYPFSTE HHHHHHCCCCCEEEEEEEEECCCCCCCCCEECCHHHCCHHHHHHHHHHHHHHHHHHHCCC LGPVRLWCAAYVAVMLVGGALFGTTFYERADPFEVYSTLVSRLSVWGRRGDLLVVRSPLA CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCC NLDTTPARPGLVAVVAVLFGSTAFDSFKDSTRWLSFVQSTDTSSYLLNNLALLAFCVGVG CCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH LVFVVGCVLTGLGDDLRRRELPNLLAHSVVPIIVGYIIAHYLRYLVEVGQLTLVQASDPF HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCC SDGSNYLGTGNLDPVYWLAYHPTFLANVKVLAVVVGHVLGVIAAHDRAIKILPPRHQLTG CCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHCC QLPLLFAMVAFTVGGLYLLFAA CHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SPDGITLAHGIGGAKDLPISPELAIAGASAALVVSFTVLAVAWRTPRYDAATSGRPAPT CCCCEEEECCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH LLGRLVDSTGWRVACRVFGMVVFLWAAMAAVFGKDLVINPIFGIFYVWWWVGLVPLSVLL HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH GPVWKAISPARTINLAFAKVSGSDPDRGLLTYPDRLGYWPAALGLFAFVWMELVYPFSTE HHHHHHCCCCCEEEEEEEEECCCCCCCCCEECCHHHCCHHHHHHHHHHHHHHHHHHHCCC LGPVRLWCAAYVAVMLVGGALFGTTFYERADPFEVYSTLVSRLSVWGRRGDLLVVRSPLA CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCC NLDTTPARPGLVAVVAVLFGSTAFDSFKDSTRWLSFVQSTDTSSYLLNNLALLAFCVGVG CCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH LVFVVGCVLTGLGDDLRRRELPNLLAHSVVPIIVGYIIAHYLRYLVEVGQLTLVQASDPF HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCC SDGSNYLGTGNLDPVYWLAYHPTFLANVKVLAVVVGHVLGVIAAHDRAIKILPPRHQLTG CCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHCC QLPLLFAMVAFTVGGLYLLFAA CHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA