Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119715452

Identifier: 119715452

GI number: 119715452

Start: 1289071

End: 1290399

Strand: Reverse

Name: 119715452

Synonym: Noca_1216

Alternate gene names: NA

Gene position: 1290399-1289071 (Counterclockwise)

Preceding gene: 119715453

Following gene: 119715449

Centisome position: 25.88

GC content: 70.28

Gene sequence:

>1329_bases
TTGTCTCCTGACGGCATCACCCTCGCGCACGGGATCGGTGGCGCGAAGGACCTCCCGATCTCGCCGGAGCTGGCGATCGC
GGGAGCCAGCGCCGCCCTAGTCGTCTCCTTCACGGTCCTGGCGGTCGCCTGGCGCACCCCGCGGTACGACGCGGCCACCA
GCGGCCGGCCGGCGCCGACGCTGCTCGGCCGGCTGGTCGACTCCACCGGCTGGCGGGTCGCCTGCCGGGTGTTCGGCATG
GTGGTCTTCCTCTGGGCCGCGATGGCCGCCGTGTTCGGCAAGGACCTGGTGATCAACCCGATCTTCGGGATCTTCTACGT
GTGGTGGTGGGTCGGCCTGGTCCCGCTGTCGGTGCTGCTCGGCCCGGTGTGGAAGGCGATCAGCCCGGCCCGGACCATCA
ACCTGGCGTTCGCGAAGGTCTCCGGCAGCGACCCGGACCGCGGGCTGCTGACCTACCCCGACCGACTCGGCTACTGGCCG
GCCGCGCTCGGCCTGTTCGCGTTCGTGTGGATGGAGCTCGTCTACCCGTTCTCCACCGAGCTCGGGCCGGTCCGGCTGTG
GTGTGCGGCGTACGTCGCGGTGATGCTGGTCGGCGGCGCGCTGTTCGGCACCACGTTCTACGAGCGCGCCGACCCGTTCG
AGGTCTACTCCACCCTGGTCTCCCGGCTCTCGGTGTGGGGCCGGCGCGGTGACCTGCTGGTGGTCCGCAGCCCGCTGGCG
AACCTGGACACGACGCCGGCCCGCCCGGGGCTGGTGGCGGTGGTCGCGGTCCTGTTCGGCAGCACGGCGTTCGACTCGTT
CAAGGACTCCACCCGGTGGCTGTCCTTCGTGCAGTCCACCGACACCTCGTCGTACCTGCTGAACAACCTGGCGCTGCTGG
CGTTCTGCGTCGGCGTCGGCCTGGTGTTCGTGGTCGGCTGCGTGCTCACCGGGCTCGGTGACGACCTGCGCCGCCGCGAG
CTGCCGAACCTGCTGGCGCACTCGGTGGTGCCGATCATCGTCGGCTACATCATCGCCCACTACCTGCGCTACCTCGTCGA
GGTCGGCCAGCTGACGCTGGTGCAGGCGAGCGACCCGTTCAGCGACGGCAGCAACTACCTGGGGACGGGGAACTTGGACC
CGGTCTACTGGTTGGCCTACCACCCCACGTTCCTGGCGAACGTCAAGGTGCTCGCGGTGGTCGTCGGGCACGTGCTGGGC
GTGATCGCGGCCCACGACCGGGCGATCAAGATCCTGCCGCCGCGGCACCAGCTGACCGGTCAGCTGCCGCTGCTGTTCGC
GATGGTGGCGTTCACCGTCGGCGGGCTCTACCTGCTGTTCGCGGCCTGA

Upstream 100 bases:

>100_bases
GACCATCAAGGGCATCGACAAGCCGGGCACGGTCGACGTCGAGTCGCACAACCTCGAGAAGGTCATCGTCCAGCTCGAGG
TCCGATGAGGGCCTGCTGAG

Downstream 100 bases:

>100_bases
GCCTGCGCCCGCCGAGCACCGGGCGCCGGGAGGTCCGCCGGTGCGCCGGTCGAGCCCCGCGGCGACAGGGCGTCCACGAG
CCGCGCGACCGCCCGGCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 442; Mature: 441

Protein sequence:

>442_residues
MSPDGITLAHGIGGAKDLPISPELAIAGASAALVVSFTVLAVAWRTPRYDAATSGRPAPTLLGRLVDSTGWRVACRVFGM
VVFLWAAMAAVFGKDLVINPIFGIFYVWWWVGLVPLSVLLGPVWKAISPARTINLAFAKVSGSDPDRGLLTYPDRLGYWP
AALGLFAFVWMELVYPFSTELGPVRLWCAAYVAVMLVGGALFGTTFYERADPFEVYSTLVSRLSVWGRRGDLLVVRSPLA
NLDTTPARPGLVAVVAVLFGSTAFDSFKDSTRWLSFVQSTDTSSYLLNNLALLAFCVGVGLVFVVGCVLTGLGDDLRRRE
LPNLLAHSVVPIIVGYIIAHYLRYLVEVGQLTLVQASDPFSDGSNYLGTGNLDPVYWLAYHPTFLANVKVLAVVVGHVLG
VIAAHDRAIKILPPRHQLTGQLPLLFAMVAFTVGGLYLLFAA

Sequences:

>Translated_442_residues
MSPDGITLAHGIGGAKDLPISPELAIAGASAALVVSFTVLAVAWRTPRYDAATSGRPAPTLLGRLVDSTGWRVACRVFGM
VVFLWAAMAAVFGKDLVINPIFGIFYVWWWVGLVPLSVLLGPVWKAISPARTINLAFAKVSGSDPDRGLLTYPDRLGYWP
AALGLFAFVWMELVYPFSTELGPVRLWCAAYVAVMLVGGALFGTTFYERADPFEVYSTLVSRLSVWGRRGDLLVVRSPLA
NLDTTPARPGLVAVVAVLFGSTAFDSFKDSTRWLSFVQSTDTSSYLLNNLALLAFCVGVGLVFVVGCVLTGLGDDLRRRE
LPNLLAHSVVPIIVGYIIAHYLRYLVEVGQLTLVQASDPFSDGSNYLGTGNLDPVYWLAYHPTFLANVKVLAVVVGHVLG
VIAAHDRAIKILPPRHQLTGQLPLLFAMVAFTVGGLYLLFAA
>Mature_441_residues
SPDGITLAHGIGGAKDLPISPELAIAGASAALVVSFTVLAVAWRTPRYDAATSGRPAPTLLGRLVDSTGWRVACRVFGMV
VFLWAAMAAVFGKDLVINPIFGIFYVWWWVGLVPLSVLLGPVWKAISPARTINLAFAKVSGSDPDRGLLTYPDRLGYWPA
ALGLFAFVWMELVYPFSTELGPVRLWCAAYVAVMLVGGALFGTTFYERADPFEVYSTLVSRLSVWGRRGDLLVVRSPLAN
LDTTPARPGLVAVVAVLFGSTAFDSFKDSTRWLSFVQSTDTSSYLLNNLALLAFCVGVGLVFVVGCVLTGLGDDLRRREL
PNLLAHSVVPIIVGYIIAHYLRYLVEVGQLTLVQASDPFSDGSNYLGTGNLDPVYWLAYHPTFLANVKVLAVVVGHVLGV
IAAHDRAIKILPPRHQLTGQLPLLFAMVAFTVGGLYLLFAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47687; Mature: 47556

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPDGITLAHGIGGAKDLPISPELAIAGASAALVVSFTVLAVAWRTPRYDAATSGRPAPT
CCCCCEEEECCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
LLGRLVDSTGWRVACRVFGMVVFLWAAMAAVFGKDLVINPIFGIFYVWWWVGLVPLSVLL
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GPVWKAISPARTINLAFAKVSGSDPDRGLLTYPDRLGYWPAALGLFAFVWMELVYPFSTE
HHHHHHCCCCCEEEEEEEEECCCCCCCCCEECCHHHCCHHHHHHHHHHHHHHHHHHHCCC
LGPVRLWCAAYVAVMLVGGALFGTTFYERADPFEVYSTLVSRLSVWGRRGDLLVVRSPLA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCC
NLDTTPARPGLVAVVAVLFGSTAFDSFKDSTRWLSFVQSTDTSSYLLNNLALLAFCVGVG
CCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
LVFVVGCVLTGLGDDLRRRELPNLLAHSVVPIIVGYIIAHYLRYLVEVGQLTLVQASDPF
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCC
SDGSNYLGTGNLDPVYWLAYHPTFLANVKVLAVVVGHVLGVIAAHDRAIKILPPRHQLTG
CCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHCC
QLPLLFAMVAFTVGGLYLLFAA
CHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SPDGITLAHGIGGAKDLPISPELAIAGASAALVVSFTVLAVAWRTPRYDAATSGRPAPT
CCCCEEEECCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
LLGRLVDSTGWRVACRVFGMVVFLWAAMAAVFGKDLVINPIFGIFYVWWWVGLVPLSVLL
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GPVWKAISPARTINLAFAKVSGSDPDRGLLTYPDRLGYWPAALGLFAFVWMELVYPFSTE
HHHHHHCCCCCEEEEEEEEECCCCCCCCCEECCHHHCCHHHHHHHHHHHHHHHHHHHCCC
LGPVRLWCAAYVAVMLVGGALFGTTFYERADPFEVYSTLVSRLSVWGRRGDLLVVRSPLA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCC
NLDTTPARPGLVAVVAVLFGSTAFDSFKDSTRWLSFVQSTDTSSYLLNNLALLAFCVGVG
CCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
LVFVVGCVLTGLGDDLRRRELPNLLAHSVVPIIVGYIIAHYLRYLVEVGQLTLVQASDPF
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCC
SDGSNYLGTGNLDPVYWLAYHPTFLANVKVLAVVVGHVLGVIAAHDRAIKILPPRHQLTG
CCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHCC
QLPLLFAMVAFTVGGLYLLFAA
CHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA