| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
Click here to switch to the map view.
The map label for this gene is paaG [H]
Identifier: 119715441
GI number: 119715441
Start: 1279129
End: 1279923
Strand: Reverse
Name: paaG [H]
Synonym: Noca_1205
Alternate gene names: 119715441
Gene position: 1279923-1279129 (Counterclockwise)
Preceding gene: 119715442
Following gene: 119715435
Centisome position: 25.67
GC content: 72.33
Gene sequence:
>795_bases ATGACCGAGCCCTCCGTCCTCCTCGACGTCACCGACGGCGTCGGGACCATCACGCTCAACCGTCCGGACGCCTACAACAG CCTCGACGTGGCCACCAAGGAGCTGCTCCTCGAGACGGTGCGGGCCGTGGCCGACGACCCGGCGGTGCGCTGCGTGGTGC TGACCGGCAGCGGCAGGGCCTTCTGCACCGGCCAGGACCTCAAGGAGCACATCGAGCTGCTCGAGAACGGCGGCAGCGAC CTGCTGTTCACGACCGTGGACAAGCACTACAACCCGATCGTGACCACGCTGGCCGGCATGGCCAAGCCGGTGGTCGCGGC CGTCAACGGGGTCGCGGCCGGCGCCGGGGCCAGCCTGGCGTTCGCCTGCGACCTGCGGATCCTGGCCGACACGGCCGGCT TCAACCTCGCCTTCGCCAACGTCGCGCTGTCCTGTGACACCGGCGCGAGCTACCACCTCCAGCGGCTGGTCGGCCGCGCG AAGGCGCTGGAGCTCCTCTACTTCCCGAGCACCGTCCCCGCCGCGGACGCGCTCGAGCTGGGTCTGGCCACCCGGGTGGT GCCGGCCGACGAGCTGGCCGCCGAGGTCGGTGCCCTGGCCAGCCGATTGGCCGCCGGCCCGACGGTCGCGCTGGGGGCGA TGCGGCAGTCCGTCGCGTACGCCGCCGGGCACTCCTTCGAGGAGTCGCTGGAGCTCGAGAGCGCGATGATGCAGAAGACC GGCGCCACCGCCGACCACCGGGCCGCGGTCGCCGCCTTCGTCGCCAAGCAGAAGCCGGTGTTCGAGGGCCGGTGA
Upstream 100 bases:
>100_bases CAAGCCGGGGGCCGACCGGTTCGTGGCCCGCTGCCTGGGCGACTGACACCGCCGTACCCGCCGGCCCCCGGCCCTCGGCC CGACCTGACAGGATGCCCGC
Downstream 100 bases:
>100_bases ACCGGTGTCCAGGGGTCGGTGAGCCGGGCCGGGACCCCGTCGCTCGGGGGCGACTCAACCCCGCCGGGCACCCCAGATGG AGAGCACCTGCTTCGGCGCG
Product: enoyl-CoA hydratase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MTEPSVLLDVTDGVGTITLNRPDAYNSLDVATKELLLETVRAVADDPAVRCVVLTGSGRAFCTGQDLKEHIELLENGGSD LLFTTVDKHYNPIVTTLAGMAKPVVAAVNGVAAGAGASLAFACDLRILADTAGFNLAFANVALSCDTGASYHLQRLVGRA KALELLYFPSTVPAADALELGLATRVVPADELAAEVGALASRLAAGPTVALGAMRQSVAYAAGHSFEESLELESAMMQKT GATADHRAAVAAFVAKQKPVFEGR
Sequences:
>Translated_264_residues MTEPSVLLDVTDGVGTITLNRPDAYNSLDVATKELLLETVRAVADDPAVRCVVLTGSGRAFCTGQDLKEHIELLENGGSD LLFTTVDKHYNPIVTTLAGMAKPVVAAVNGVAAGAGASLAFACDLRILADTAGFNLAFANVALSCDTGASYHLQRLVGRA KALELLYFPSTVPAADALELGLATRVVPADELAAEVGALASRLAAGPTVALGAMRQSVAYAAGHSFEESLELESAMMQKT GATADHRAAVAAFVAKQKPVFEGR >Mature_263_residues TEPSVLLDVTDGVGTITLNRPDAYNSLDVATKELLLETVRAVADDPAVRCVVLTGSGRAFCTGQDLKEHIELLENGGSDL LFTTVDKHYNPIVTTLAGMAKPVVAAVNGVAAGAGASLAFACDLRILADTAGFNLAFANVALSCDTGASYHLQRLVGRAK ALELLYFPSTVPAADALELGLATRVVPADELAAEVGALASRLAAGPTVALGAMRQSVAYAAGHSFEESLELESAMMQKTG ATADHRAAVAAFVAKQKPVFEGR
Specific function: Could possibly oxidize fatty acids using specific components [H]
COG id: COG1024
COG function: function code I; Enoyl-CoA hydratase/carnithine racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI194097323, Length=252, Percent_Identity=31.7460317460317, Blast_Score=122, Evalue=4e-28, Organism=Homo sapiens, GI31542718, Length=255, Percent_Identity=31.3725490196078, Blast_Score=107, Evalue=1e-23, Organism=Homo sapiens, GI70995211, Length=244, Percent_Identity=28.6885245901639, Blast_Score=93, Evalue=2e-19, Organism=Homo sapiens, GI45643119, Length=246, Percent_Identity=24.7967479674797, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI260275230, Length=246, Percent_Identity=24.7967479674797, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI260274832, Length=246, Percent_Identity=24.7967479674797, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI25453481, Length=254, Percent_Identity=26.3779527559055, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI51538573, Length=254, Percent_Identity=26.3779527559055, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI4757966, Length=241, Percent_Identity=27.3858921161826, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI51538581, Length=241, Percent_Identity=27.3858921161826, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI4757968, Length=259, Percent_Identity=26.2548262548263, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI49355787, Length=259, Percent_Identity=26.2548262548263, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI37594469, Length=193, Percent_Identity=26.9430051813472, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI37594471, Length=193, Percent_Identity=26.9430051813472, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI4502327, Length=263, Percent_Identity=27.3764258555133, Blast_Score=65, Evalue=5e-11, Organism=Escherichia coli, GI1787660, Length=259, Percent_Identity=40.1544401544402, Blast_Score=159, Evalue=2e-40, Organism=Escherichia coli, GI1787659, Length=248, Percent_Identity=31.8548387096774, Blast_Score=111, Evalue=5e-26, Organism=Escherichia coli, GI221142681, Length=257, Percent_Identity=29.9610894941634, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI1788597, Length=261, Percent_Identity=31.4176245210728, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI87082183, Length=260, Percent_Identity=24.6153846153846, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1790281, Length=187, Percent_Identity=28.3422459893048, Blast_Score=68, Evalue=7e-13, Organism=Caenorhabditis elegans, GI25145438, Length=258, Percent_Identity=33.3333333333333, Blast_Score=125, Evalue=3e-29, Organism=Caenorhabditis elegans, GI17554946, Length=253, Percent_Identity=29.6442687747036, Blast_Score=117, Evalue=7e-27, Organism=Caenorhabditis elegans, GI17534483, Length=260, Percent_Identity=28.0769230769231, Blast_Score=101, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17560910, Length=247, Percent_Identity=27.9352226720648, Blast_Score=100, Evalue=9e-22, Organism=Caenorhabditis elegans, GI17536985, Length=260, Percent_Identity=25.7692307692308, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17540714, Length=197, Percent_Identity=31.4720812182741, Blast_Score=98, Evalue=5e-21, Organism=Caenorhabditis elegans, GI17549921, Length=209, Percent_Identity=31.5789473684211, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17535521, Length=253, Percent_Identity=23.7154150197628, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17540306, Length=248, Percent_Identity=27.8225806451613, Blast_Score=74, Evalue=8e-14, Organism=Caenorhabditis elegans, GI25144157, Length=192, Percent_Identity=28.6458333333333, Blast_Score=64, Evalue=6e-11, Organism=Caenorhabditis elegans, GI25144160, Length=192, Percent_Identity=28.6458333333333, Blast_Score=64, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6320241, Length=229, Percent_Identity=27.0742358078603, Blast_Score=74, Evalue=2e-14, Organism=Drosophila melanogaster, GI20129971, Length=248, Percent_Identity=31.4516129032258, Blast_Score=125, Evalue=3e-29, Organism=Drosophila melanogaster, GI24653477, Length=248, Percent_Identity=31.4516129032258, Blast_Score=125, Evalue=3e-29, Organism=Drosophila melanogaster, GI24653139, Length=267, Percent_Identity=29.9625468164794, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI19922422, Length=257, Percent_Identity=26.4591439688716, Blast_Score=92, Evalue=4e-19, Organism=Drosophila melanogaster, GI19920382, Length=258, Percent_Identity=28.6821705426357, Blast_Score=92, Evalue=4e-19, Organism=Drosophila melanogaster, GI24654903, Length=193, Percent_Identity=27.979274611399, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI24650670, Length=214, Percent_Identity=28.9719626168224, Blast_Score=86, Evalue=3e-17, Organism=Drosophila melanogaster, GI21357171, Length=228, Percent_Identity=28.9473684210526, Blast_Score=80, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001753 - InterPro: IPR011968 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.17 [H]
Molecular weight: Translated: 27313; Mature: 27182
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEPSVLLDVTDGVGTITLNRPDAYNSLDVATKELLLETVRAVADDPAVRCVVLTGSGRA CCCCCEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCE FCTGQDLKEHIELLENGGSDLLFTTVDKHYNPIVTTLAGMAKPVVAAVNGVAAGAGASLA EECHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEE FACDLRILADTAGFNLAFANVALSCDTGASYHLQRLVGRAKALELLYFPSTVPAADALEL EEEEEEEEECCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHEEEEECCCCCCCHHHHHH GLATRVVPADELAAEVGALASRLAAGPTVALGAMRQSVAYAAGHSFEESLELESAMMQKT HHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC GATADHRAAVAAFVAKQKPVFEGR CCCCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TEPSVLLDVTDGVGTITLNRPDAYNSLDVATKELLLETVRAVADDPAVRCVVLTGSGRA CCCCEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCE FCTGQDLKEHIELLENGGSDLLFTTVDKHYNPIVTTLAGMAKPVVAAVNGVAAGAGASLA EECHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEE FACDLRILADTAGFNLAFANVALSCDTGASYHLQRLVGRAKALELLYFPSTVPAADALEL EEEEEEEEECCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHEEEEECCCCCCCHHHHHH GLATRVVPADELAAEVGALASRLAAGPTVALGAMRQSVAYAAGHSFEESLELESAMMQKT HHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC GATADHRAAVAAFVAKQKPVFEGR CCCCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9748275; 9097039; 9278503; 10766858 [H]