| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715394
Identifier: 119715394
GI number: 119715394
Start: 1229809
End: 1231080
Strand: Direct
Name: 119715394
Synonym: Noca_1156
Alternate gene names: NA
Gene position: 1229809-1231080 (Clockwise)
Preceding gene: 119715393
Following gene: 119715395
Centisome position: 24.67
GC content: 70.83
Gene sequence:
>1272_bases ATGCCCGGCTACGTGCGCCGCATCGTCGACGACGAGCTCGACGACCTGCTCGCCGGCCTTGCGGCGATCAGCATCGAGGG CCCGAAGGGGGTCGGCAAGACCGCGACAGCCGAGGTCCGTGCTACCACGACCTACCGGCTGGACGTGCCGTCCGAGCTGC AGGTCGTCCAGGCCGACCCGGATCGGCTGGTGGCCGGCCCTCAGCCCATCCTGATCGACGAGTGGCAGCACTATCCGCCG AGTTGGGACCTGGTGCGCCGTGCCGTGGACCGAGACCCTGCGCCCGCCCGGTTCCTGCTCACCGGCTCGGCCTCGCCCAG TGGCGCTCCGACGCACACCGGTGCAGCTCGAATCGTTCCGGTTCGCATGCGCCCGCTGTCCCTCGTGGAACGCGGCATCC CCGCCTCCGTGAGCCTCGGCAGCCTCCTCTCGGGTCGGCGAGGAGCGATCAGCGGCGCCACGGACATCACCCTGCGCGAC TACGTGGACGAGATCCTCGCCGGAGGGTTCCCCGGACTGCGCGGGCTGCCGGCGCGAGCGCTGCGCGCCCAGCTCGACGG ATACCTCCAGCGCGTCGTCGACCGTGAGTTCCCCGAGCAGGGATTGACCCTGAGGCACCCAGACACGCTGCGGGCCTGGA TGCGCGCGTACGCCGCTGCGACGTCCACGACCGCGAGCTTCGAGGTGATCCGCGACGCTGCGATGCCGGGCGTCGGCAAC AAGCCCGCGAAGAGCACGACTGTTCCCTGGCGCGACATCCTCGCCCGGCTCTGGCTGCTCGACCCCGTGCCGGCGTGGCT GCCGACGACCAACCTGTTCAAGGAGCTGGCCTCCGCGGACAAGCATCAGCTCGCCGACCCTGCCCTCGCCGCACGCCTGC TCAATGTCACCGCCGAGAAGCTCCTCGCGGGCGAGTCCGTCGGCCCCCAGGTGCCACGGCACGGGACCCTCCTCGGCGCG CTGCTCGAGGGCCTGGTCGCGCTCAATCTCCGCGTGTATGCGCAGGCGGCCGAAGCAGAGGTCCGCCATCTGCGCACCCA CCGGGGCGAACACGAGGTCGACTTCATCGTCACGGGGAGCGACGGAGGCGTCGTCGCACTCGAGGTGAAGCTCTCCGCGA CGGTCGCGGACACGGACCTGACTCACCTCAGGTGGCTGGCGAGCAGGCTCGGGAACGACCTGCGAGACGCGGTCCTCGTC AACACCGGGACGCATGCCTATCGTCGCGCCGACGGCATCGCCGTCGTACCTGTCGCGCTGCTCGGTCCCTGA
Upstream 100 bases:
>100_bases AAGCGGTCAGGACGAACCGGGAGCGTCTAGAGTCCCGAAATGGGAGCGTAGGGCTTCCCGAAACAGTAGTGTTGCGGGCA TGGCCAGGACCATCCGTCCC
Downstream 100 bases:
>100_bases CCACTTGCGGAAGATCGGGCGCCCCTGAGCGGTTGTGGTCTCGACAGGCTCGACCACCGGACCTCCCTAGGATCACCCCA TGACGTTCGACCAGCGGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: ATPase-Like Protein; AAA Family ATPase; AAA+ Superfamily ATPase
Number of amino acids: Translated: 423; Mature: 422
Protein sequence:
>423_residues MPGYVRRIVDDELDDLLAGLAAISIEGPKGVGKTATAEVRATTTYRLDVPSELQVVQADPDRLVAGPQPILIDEWQHYPP SWDLVRRAVDRDPAPARFLLTGSASPSGAPTHTGAARIVPVRMRPLSLVERGIPASVSLGSLLSGRRGAISGATDITLRD YVDEILAGGFPGLRGLPARALRAQLDGYLQRVVDREFPEQGLTLRHPDTLRAWMRAYAAATSTTASFEVIRDAAMPGVGN KPAKSTTVPWRDILARLWLLDPVPAWLPTTNLFKELASADKHQLADPALAARLLNVTAEKLLAGESVGPQVPRHGTLLGA LLEGLVALNLRVYAQAAEAEVRHLRTHRGEHEVDFIVTGSDGGVVALEVKLSATVADTDLTHLRWLASRLGNDLRDAVLV NTGTHAYRRADGIAVVPVALLGP
Sequences:
>Translated_423_residues MPGYVRRIVDDELDDLLAGLAAISIEGPKGVGKTATAEVRATTTYRLDVPSELQVVQADPDRLVAGPQPILIDEWQHYPP SWDLVRRAVDRDPAPARFLLTGSASPSGAPTHTGAARIVPVRMRPLSLVERGIPASVSLGSLLSGRRGAISGATDITLRD YVDEILAGGFPGLRGLPARALRAQLDGYLQRVVDREFPEQGLTLRHPDTLRAWMRAYAAATSTTASFEVIRDAAMPGVGN KPAKSTTVPWRDILARLWLLDPVPAWLPTTNLFKELASADKHQLADPALAARLLNVTAEKLLAGESVGPQVPRHGTLLGA LLEGLVALNLRVYAQAAEAEVRHLRTHRGEHEVDFIVTGSDGGVVALEVKLSATVADTDLTHLRWLASRLGNDLRDAVLV NTGTHAYRRADGIAVVPVALLGP >Mature_422_residues PGYVRRIVDDELDDLLAGLAAISIEGPKGVGKTATAEVRATTTYRLDVPSELQVVQADPDRLVAGPQPILIDEWQHYPPS WDLVRRAVDRDPAPARFLLTGSASPSGAPTHTGAARIVPVRMRPLSLVERGIPASVSLGSLLSGRRGAISGATDITLRDY VDEILAGGFPGLRGLPARALRAQLDGYLQRVVDREFPEQGLTLRHPDTLRAWMRAYAAATSTTASFEVIRDAAMPGVGNK PAKSTTVPWRDILARLWLLDPVPAWLPTTNLFKELASADKHQLADPALAARLLNVTAEKLLAGESVGPQVPRHGTLLGAL LEGLVALNLRVYAQAAEAEVRHLRTHRGEHEVDFIVTGSDGGVVALEVKLSATVADTDLTHLRWLASRLGNDLRDAVLVN TGTHAYRRADGIAVVPVALLGP
Specific function: Unknown
COG id: COG1373
COG function: function code R; Predicted ATPase (AAA+ superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45388; Mature: 45257
Theoretical pI: Translated: 7.10; Mature: 7.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGYVRRIVDDELDDLLAGLAAISIEGPKGVGKTATAEVRATTTYRLDVPSELQVVQADP CCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCEEEEEEEEEEECCCCCCEEEECCC DRLVAGPQPILIDEWQHYPPSWDLVRRAVDRDPAPARFLLTGSASPSGAPTHTGAARIVP CCCCCCCCCEEECCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCEEEEE VRMRPLSLVERGIPASVSLGSLLSGRRGAISGATDITLRDYVDEILAGGFPGLRGLPARA EECCHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHH LRAQLDGYLQRVVDREFPEQGLTLRHPDTLRAWMRAYAAATSTTASFEVIRDAAMPGVGN HHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCC KPAKSTTVPWRDILARLWLLDPVPAWLPTTNLFKELASADKHQLADPALAARLLNVTAEK CCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHH LLAGESVGPQVPRHGTLLGALLEGLVALNLRVYAQAAEAEVRHLRTHRGEHEVDFIVTGS HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC DGGVVALEVKLSATVADTDLTHLRWLASRLGNDLRDAVLVNTGTHAYRRADGIAVVPVAL CCCEEEEEEEEEEEECCCHHHHHHHHHHHHCCHHHHHEEEECCCHHHHHCCCEEEEEEEE LGP CCC >Mature Secondary Structure PGYVRRIVDDELDDLLAGLAAISIEGPKGVGKTATAEVRATTTYRLDVPSELQVVQADP CHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCEEEEEEEEEEECCCCCCEEEECCC DRLVAGPQPILIDEWQHYPPSWDLVRRAVDRDPAPARFLLTGSASPSGAPTHTGAARIVP CCCCCCCCCEEECCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCEEEEE VRMRPLSLVERGIPASVSLGSLLSGRRGAISGATDITLRDYVDEILAGGFPGLRGLPARA EECCHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHH LRAQLDGYLQRVVDREFPEQGLTLRHPDTLRAWMRAYAAATSTTASFEVIRDAAMPGVGN HHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCC KPAKSTTVPWRDILARLWLLDPVPAWLPTTNLFKELASADKHQLADPALAARLLNVTAEK CCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHH LLAGESVGPQVPRHGTLLGALLEGLVALNLRVYAQAAEAEVRHLRTHRGEHEVDFIVTGS HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC DGGVVALEVKLSATVADTDLTHLRWLASRLGNDLRDAVLVNTGTHAYRRADGIAVVPVAL CCCEEEEEEEEEEEECCCHHHHHHHHHHHHCCHHHHHEEEECCCHHHHHCCCEEEEEEEE LGP CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA