| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715367
Identifier: 119715367
GI number: 119715367
Start: 1197119
End: 1197619
Strand: Reverse
Name: 119715367
Synonym: Noca_1129
Alternate gene names: NA
Gene position: 1197619-1197119 (Counterclockwise)
Preceding gene: 119715368
Following gene: 119715359
Centisome position: 24.02
GC content: 74.65
Gene sequence:
>501_bases ATGAGCGGCACCCGCCGCCGCCCGGTGGTCGACGCGATGGCGTCCGAGCAGCTCGCCGGGCTCGACCTGCAGGGCCTGCG CTCCTACCGCCACCGCCTCGAGGCCGAGGAGGACCGGGTGTCCTACTGGCGCCGGCTGGTGCACGCCCGGCTCGACCTGC TGGCGGCCGGGTCCCGCTCGGACCACCCGTTGACCGTCGACGACCTGGTGCGGATCCTCGGCGACACGGGCACCGGCGGC AGTCGCCGGGCGCTGGTGAGCGTCCGGGCGGCCGACCCGCTGCCGGAGCTGCCCGAGCTCAGCGAGATGTGGGTCACCGA GGTCGACCCGCACGACTCCGACCAGGTCGCGGACGCAGTCGAGCGGCTGACCGAGGCCGAGCGGCAGCTGACGACGTACC GCCGCGCCCTGCACGAGCGTATCGACGAGGCCACCGGCGAGCTGATCGTGCGCTACCGGGAGAACCCCGCCGCGGCGCTC TCGATCATCCCCGAGGGGTAG
Upstream 100 bases:
>100_bases TCCCCGACGCGAAGCTGGTCAGCTCCAACACCCACGACTTCTCGGTGATGCTGAAGCGCGCCGGGGTCGATCCGGCCCTG GTCGACGCGGAGCCGCCCCG
Downstream 100 bases:
>100_bases CGGTCAGGCGACGACCCGGAGGACCTCCTCGATGGAGGTGCGGCCCTGCAGCACCTTCTGCCAGCCGTCCGACTTCAAGG TGGTCATCCCCTGCTCCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MSGTRRRPVVDAMASEQLAGLDLQGLRSYRHRLEAEEDRVSYWRRLVHARLDLLAAGSRSDHPLTVDDLVRILGDTGTGG SRRALVSVRAADPLPELPELSEMWVTEVDPHDSDQVADAVERLTEAERQLTTYRRALHERIDEATGELIVRYRENPAAAL SIIPEG
Sequences:
>Translated_166_residues MSGTRRRPVVDAMASEQLAGLDLQGLRSYRHRLEAEEDRVSYWRRLVHARLDLLAAGSRSDHPLTVDDLVRILGDTGTGG SRRALVSVRAADPLPELPELSEMWVTEVDPHDSDQVADAVERLTEAERQLTTYRRALHERIDEATGELIVRYRENPAAAL SIIPEG >Mature_165_residues SGTRRRPVVDAMASEQLAGLDLQGLRSYRHRLEAEEDRVSYWRRLVHARLDLLAAGSRSDHPLTVDDLVRILGDTGTGGS RRALVSVRAADPLPELPELSEMWVTEVDPHDSDQVADAVERLTEAERQLTTYRRALHERIDEATGELIVRYRENPAAALS IIPEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18588; Mature: 18457
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGTRRRPVVDAMASEQLAGLDLQGLRSYRHRLEAEEDRVSYWRRLVHARLDLLAAGSRS CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC DHPLTVDDLVRILGDTGTGGSRRALVSVRAADPLPELPELSEMWVTEVDPHDSDQVADAV CCCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHH ERLTEAERQLTTYRRALHERIDEATGELIVRYRENPAAALSIIPEG HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHCCCCCCEEEEECCCC >Mature Secondary Structure SGTRRRPVVDAMASEQLAGLDLQGLRSYRHRLEAEEDRVSYWRRLVHARLDLLAAGSRS CCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC DHPLTVDDLVRILGDTGTGGSRRALVSVRAADPLPELPELSEMWVTEVDPHDSDQVADAV CCCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHH ERLTEAERQLTTYRRALHERIDEATGELIVRYRENPAAALSIIPEG HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHCCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA