| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715331
Identifier: 119715331
GI number: 119715331
Start: 1153904
End: 1154587
Strand: Reverse
Name: 119715331
Synonym: Noca_1093
Alternate gene names: NA
Gene position: 1154587-1153904 (Counterclockwise)
Preceding gene: 119715332
Following gene: 119715330
Centisome position: 23.16
GC content: 61.99
Gene sequence:
>684_bases GTGAACCCCGTGGAGGTAGTCGGGACGGACGAACTAGTCAGGATCTACCTGAAGGCCAAGCGAGAAGTCCTGGACGGAGG CTTCGCCCATGAGGTCGCCTGGCAGTTTGAGACTGCCCAGTCCTCCGTCACACCCCGACAGTTCGTAAGCGAGGCTTCTT GGGTCGTGCTGTCAGCGGGCATGAGGGAAGCCGTTGTACGTCGCCTCTTCCCCAGACTAGAAGATGCGTGTCATGGCTTT GATCTTGAGCGAATGGCCGCCAACAAACCCGAGGTCCGCCGTCACTGCCTCGACGTGTTCGGGCACGAACGGAAGATCGA CGCGATCCTTGAGATCGCGGAGACAGTGAGGATGCTTGGCGACGCTGGGCTTAGCAAGGCCCTCCTCGACCTGGAACCGT TCCTTCGCTCGTTGCCCTACATCGGCCCGGTTACTTGGCGGCATCTTGCGAAGAACATCGGCGTATCTGTCGCGAAGGCA GACCGGCACATGGTGAGGTTTGCCGCCGCAACCGGGCGTAATGACGTCGACCGCCTGTGCTCAGAGATCTCCGATTGGAT CGGTGACCCGGTCGCAGTAGTAGACGTGGTGCTGTGGCGTTGGTCCGTGCTGCACGCTCGTTCAGCTGGGGGCTCGCGCC CATCGCTGGCCGATGCTCGCCGTCCGGCAATCGCCCTGGGGTAG
Upstream 100 bases:
>100_bases GTGCCCTTCGTGCGCGTCGAAGAGTGCGGCAGCGACTTCCGTGACCGCGCCTCGGTCCAGCTTCCGACCAACAAGTCCCT CGAAGGGGCAGGATGACCCT
Downstream 100 bases:
>100_bases CCAACGGGCGTTAGCGTCCGCGACGTCGTCGCGGACGAGGCGCGCTGCGTCATATCCAACGGATCACATCACAGACCCGA GTTTCAGAGGTCGGGGCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MNPVEVVGTDELVRIYLKAKREVLDGGFAHEVAWQFETAQSSVTPRQFVSEASWVVLSAGMREAVVRRLFPRLEDACHGF DLERMAANKPEVRRHCLDVFGHERKIDAILEIAETVRMLGDAGLSKALLDLEPFLRSLPYIGPVTWRHLAKNIGVSVAKA DRHMVRFAAATGRNDVDRLCSEISDWIGDPVAVVDVVLWRWSVLHARSAGGSRPSLADARRPAIALG
Sequences:
>Translated_227_residues MNPVEVVGTDELVRIYLKAKREVLDGGFAHEVAWQFETAQSSVTPRQFVSEASWVVLSAGMREAVVRRLFPRLEDACHGF DLERMAANKPEVRRHCLDVFGHERKIDAILEIAETVRMLGDAGLSKALLDLEPFLRSLPYIGPVTWRHLAKNIGVSVAKA DRHMVRFAAATGRNDVDRLCSEISDWIGDPVAVVDVVLWRWSVLHARSAGGSRPSLADARRPAIALG >Mature_227_residues MNPVEVVGTDELVRIYLKAKREVLDGGFAHEVAWQFETAQSSVTPRQFVSEASWVVLSAGMREAVVRRLFPRLEDACHGF DLERMAANKPEVRRHCLDVFGHERKIDAILEIAETVRMLGDAGLSKALLDLEPFLRSLPYIGPVTWRHLAKNIGVSVAKA DRHMVRFAAATGRNDVDRLCSEISDWIGDPVAVVDVVLWRWSVLHARSAGGSRPSLADARRPAIALG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25215; Mature: 25215
Theoretical pI: Translated: 7.65; Mature: 7.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPVEVVGTDELVRIYLKAKREVLDGGFAHEVAWQFETAQSSVTPRQFVSEASWVVLSAG CCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH MREAVVRRLFPRLEDACHGFDLERMAANKPEVRRHCLDVFGHERKIDAILEIAETVRMLG HHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH DAGLSKALLDLEPFLRSLPYIGPVTWRHLAKNIGVSVAKADRHMVRFAAATGRNDVDRLC HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHH SEISDWIGDPVAVVDVVLWRWSVLHARSAGGSRPSLADARRPAIALG HHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCC >Mature Secondary Structure MNPVEVVGTDELVRIYLKAKREVLDGGFAHEVAWQFETAQSSVTPRQFVSEASWVVLSAG CCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH MREAVVRRLFPRLEDACHGFDLERMAANKPEVRRHCLDVFGHERKIDAILEIAETVRMLG HHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH DAGLSKALLDLEPFLRSLPYIGPVTWRHLAKNIGVSVAKADRHMVRFAAATGRNDVDRLC HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHH SEISDWIGDPVAVVDVVLWRWSVLHARSAGGSRPSLADARRPAIALG HHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA