Click here to switch to the map view.

The map label for this gene is rmuC [H]

Identifier: 119715317

GI number: 119715317

Start: 1136431

End: 1137555

Strand: Reverse

Name: rmuC [H]

Synonym: Noca_1078

Alternate gene names: 119715317

Gene position: 1137555-1136431 (Counterclockwise)

Preceding gene: 119715318

Following gene: 119715314

Centisome position: 22.82

GC content: 73.6

Gene sequence:

>1125_bases
ATGGCGGCGCGTTCCCCGGGCGATGTCGGCGGTGGCCTCCATGCTGGCTCCATGACCGCGGTGACCCTCTTCCTCGCCCT
CCTCGTCGGGCTGGCGCTCGGCTGCCTCCTCGGTGCCCTGCTCGGCGTGCTGTGGTCCCGTTCCCGGCGCTCGTTCACCG
ACGGCCTGGTCGACCAGGCCGAGGTCATGCAGGGCCTGGACCGGCTCAGCGACCAGATGCACCACCTCGATCGGGCCCGC
GCCACCTGGCAGGGTCACTTCGACACCCAGGTCGACCAGCTCCAGCGCGAGACCCGGTCGCTCTCGACCGCCCTGCGCAA
GCCGCAGGTCCGCGGCCGGTGGGGCGAGCTGCACCTGCGTCGGGCCGTCGAGCTGGCCGGGCTCGTCGACCGGTGCGACT
TCAGCGAGCAGGTGCGCCTCGACGACGGGGCGCGCCGGCCGGACCTGGTGGTACACCTCGTCGGCGGGCGACGGGTGGTC
GTCGACGCCAAGGTGCCGCTGGACGCCTATCTCGACGCGACCTCCACCGACGACGAGGAGGAGCACCGCGCCCACCTGCG
CCGCCACGTCACCCAGCTGCGCACCCACGTCGAGGCGCTCGGCTCCAAGCAGTACTGGCGCTCGCTCGAGGAGAGCCCGG
AGTTCGTGGTGCTGTTCGTGCCGGCCGAGTCGTTCCTGGCCGCGGCCCTGGAGACCGACCCGACCCTGATCGAGCACGCC
GCCGCGCGCCAGGTCGTGCTCGCCACCCCGACGACGCTGATCGCGCTGCTGCGCACGGTCGCCCACGGCTGGAGCCACGA
GGCCCTCGCCGACCAGGCGCGCGAGATCCACCGCCTCGGGCGCGAGCTGCACGGCCGGCTGCTCGGCATGACCGGCCACC
TCGACCAGCTCGGCCGCTCGCTCAACGCCGCGGTCGGCCACTACAACCAGACGGTCGGCTCCCTGGAGTCGCGGGTGCTG
GTCAGCGGCCGCCGGTTCGCGGACCTCTCGGTGACCGACGAGGAGCTGCCGAGCCCGCGCCAGATCGACGCCACGGCCCG
GTCCATATCACCCTCCGGGCTGCGCTCGGTGGAACGGCGCGCCGCCGACGACGATCCGGGCGCGGACCATACCGTGGCCC
TGTGA

Upstream 100 bases:

>100_bases
TGCGGGTGGGCGGCGCGAATTCGCTGTAACGCCGTGTTACCCCATCCATCGACCGTGTTGCAGCAGGGTGGGCAGAAGGG
GTAACACGGCGTTACAGCAG

Downstream 100 bases:

>100_bases
GTCAGCGGGCGATTCAGCGCGCGAGCCAGCGCCGGACCCTCTGGGAGGAGGGGCGCGAGCCGGGCCGTCAGGTCGTCGCG
CTCGGGCTGGCGCTCGCCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 373

Protein sequence:

>374_residues
MAARSPGDVGGGLHAGSMTAVTLFLALLVGLALGCLLGALLGVLWSRSRRSFTDGLVDQAEVMQGLDRLSDQMHHLDRAR
ATWQGHFDTQVDQLQRETRSLSTALRKPQVRGRWGELHLRRAVELAGLVDRCDFSEQVRLDDGARRPDLVVHLVGGRRVV
VDAKVPLDAYLDATSTDDEEEHRAHLRRHVTQLRTHVEALGSKQYWRSLEESPEFVVLFVPAESFLAAALETDPTLIEHA
AARQVVLATPTTLIALLRTVAHGWSHEALADQAREIHRLGRELHGRLLGMTGHLDQLGRSLNAAVGHYNQTVGSLESRVL
VSGRRFADLSVTDEELPSPRQIDATARSISPSGLRSVERRAADDDPGADHTVAL

Sequences:

>Translated_374_residues
MAARSPGDVGGGLHAGSMTAVTLFLALLVGLALGCLLGALLGVLWSRSRRSFTDGLVDQAEVMQGLDRLSDQMHHLDRAR
ATWQGHFDTQVDQLQRETRSLSTALRKPQVRGRWGELHLRRAVELAGLVDRCDFSEQVRLDDGARRPDLVVHLVGGRRVV
VDAKVPLDAYLDATSTDDEEEHRAHLRRHVTQLRTHVEALGSKQYWRSLEESPEFVVLFVPAESFLAAALETDPTLIEHA
AARQVVLATPTTLIALLRTVAHGWSHEALADQAREIHRLGRELHGRLLGMTGHLDQLGRSLNAAVGHYNQTVGSLESRVL
VSGRRFADLSVTDEELPSPRQIDATARSISPSGLRSVERRAADDDPGADHTVAL
>Mature_373_residues
AARSPGDVGGGLHAGSMTAVTLFLALLVGLALGCLLGALLGVLWSRSRRSFTDGLVDQAEVMQGLDRLSDQMHHLDRARA
TWQGHFDTQVDQLQRETRSLSTALRKPQVRGRWGELHLRRAVELAGLVDRCDFSEQVRLDDGARRPDLVVHLVGGRRVVV
DAKVPLDAYLDATSTDDEEEHRAHLRRHVTQLRTHVEALGSKQYWRSLEESPEFVVLFVPAESFLAAALETDPTLIEHAA
ARQVVLATPTTLIALLRTVAHGWSHEALADQAREIHRLGRELHGRLLGMTGHLDQLGRSLNAAVGHYNQTVGSLESRVLV
SGRRFADLSVTDEELPSPRQIDATARSISPSGLRSVERRAADDDPGADHTVAL

Specific function: Involved in DNA recombination [H]

COG id: COG1322

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rmuC family [H]

Homologues:

Organism=Escherichia coli, GI1790266, Length=284, Percent_Identity=29.9295774647887, Blast_Score=128, Evalue=6e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003798 [H]

Pfam domain/function: PF02646 RmuC [H]

EC number: NA

Molecular weight: Translated: 41061; Mature: 40930

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAARSPGDVGGGLHAGSMTAVTLFLALLVGLALGCLLGALLGVLWSRSRRSFTDGLVDQA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVMQGLDRLSDQMHHLDRARATWQGHFDTQVDQLQRETRSLSTALRKPQVRGRWGELHLR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
RAVELAGLVDRCDFSEQVRLDDGARRPDLVVHLVGGRRVVVDAKVPLDAYLDATSTDDEE
HHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCEEEEEECCCCHHHHCCCCCCCCHH
EHRAHLRRHVTQLRTHVEALGSKQYWRSLEESPEFVVLFVPAESFLAAALETDPTLIEHA
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEECHHHHHHHHHCCCHHHHHHH
AARQVVLATPTTLIALLRTVAHGWSHEALADQAREIHRLGRELHGRLLGMTGHLDQLGRS
HHCEEEEECHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
LNAAVGHYNQTVGSLESRVLVSGRRFADLSVTDEELPSPRQIDATARSISPSGLRSVERR
HHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHCCCCCHHHHHHHCCCHHHHHHHHHH
AADDDPGADHTVAL
CCCCCCCCCCCCCC
>Mature Secondary Structure 
AARSPGDVGGGLHAGSMTAVTLFLALLVGLALGCLLGALLGVLWSRSRRSFTDGLVDQA
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVMQGLDRLSDQMHHLDRARATWQGHFDTQVDQLQRETRSLSTALRKPQVRGRWGELHLR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
RAVELAGLVDRCDFSEQVRLDDGARRPDLVVHLVGGRRVVVDAKVPLDAYLDATSTDDEE
HHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCEEEEEECCCCHHHHCCCCCCCCHH
EHRAHLRRHVTQLRTHVEALGSKQYWRSLEESPEFVVLFVPAESFLAAALETDPTLIEHA
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEECHHHHHHHHHCCCHHHHHHH
AARQVVLATPTTLIALLRTVAHGWSHEALADQAREIHRLGRELHGRLLGMTGHLDQLGRS
HHCEEEEECHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
LNAAVGHYNQTVGSLESRVLVSGRRFADLSVTDEELPSPRQIDATARSISPSGLRSVERR
HHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHCCCCCHHHHHHHCCCHHHHHHHHHH
AADDDPGADHTVAL
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA