| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
Click here to switch to the map view.
The map label for this gene is livK [C]
Identifier: 119715096
GI number: 119715096
Start: 889104
End: 890294
Strand: Direct
Name: livK [C]
Synonym: Noca_0851
Alternate gene names: 119715096
Gene position: 889104-890294 (Clockwise)
Preceding gene: 119715082
Following gene: 119715097
Centisome position: 17.83
GC content: 68.68
Gene sequence:
>1191_bases ATGACCAGTTTTCTCGCCTCCGGGCGGCTCCGCGGCCGTGGGCTCATCGCCCTGGCGGCCGCTGTAGCAGGGTCCGTAGT ACTCGCAGGGTGTGGCGGCGCCGCAGTCTCCGAGAGCAAGTCATCAGACGAACCGATCAAGATCGGCGTGTTGCTGCCCT ACACGGGTCCGTTCGGGCTCTACGGCAAGCCGATGGAGGCTGCCCTGACCGCCCGACTCAAGCTCGACGACTTCAAGGTC GGCGACCGCTCGATCGAGCTCGTCTTCGAGGACGAGGCCACCGATCCCGCCACGGCCGTGTCGAAGGCCAACAAGCTCGT CGACCAGGACGGGGTCTCGGCCGTGGTCTGCTGCGCGACGGGTGCGGCGACGCTCGCGGTCGGACCCATCCTCGCCGAGC GGGGCATCCCCCAGCTCGGCCCGATCCCGAACCCCGACGGACTCTCCGAGTTCGCGACGGCTGCCGTGGCGGCACCGACC GCCGGCCACGACGCCGGCAAGCTGGGCACCTACGCAGCGACCGACCTGGACTACCGGTCGGCCGTGATCGTGGCCAGCGA CTTCGCCTACGGCCATGAGGTTGCCGAGAACTTCAAGAAGGGCTTCACCGAGGCCGGCGGCTCGATCGTCAAGGAGGTCT ACGCGCCTCTCGGCACCAGCGACTTCGCCTCGTACCTCTCGCAGCTCCCCGACGCCGACGTCGTCTTCGCGGGCTTCGCC GGCGCCGACGCCATTCGCTTCGTGCAGCAGTACGACAAGTTCGGGGTGAAGGCCAAGATGCCGCTGATCGGGCACGGACC GCTCGTCACCGAGCTCGTCCTCAACCAGATCGGCCCGGCCGCGGTCGGCGTCGGGGCCGCCTTCTACTACTCCTCGACCC TCGACAACGCCGAGAACGAGCGGTTCATCTCGACCATGAAGGCCGCCAATCCGGACTTCGTCCCCAGCCACTTCACCGCC GGTGCGTGGGCCTCGGGGAGTGTCCTCCTCGACGCGATCGAGCGGGCCGGCGACGACGCGACCGACGGCGAGAAGCTCGC CGCCGCCATCCGGAGCACCAAGATCGAAGCCCCGTGGGGTCCGCTCGCGTTCGACCCCGACACCGGGTACGCGATCGCGC CGACCTACTACTACACCGTCGAGTCCTCGGCCACCGGCCTGTCCCACAAGATCGTCACCGAGATCCCCTGA
Upstream 100 bases:
>100_bases ATCTGACAAGTCAACCATTGACAGACGGAAAATGGGGGAGTTGTATGACGACCTAAGTCATAAGACATCTCGGATCCAAC TCCCCTCGAAGGACGAAGTC
Downstream 100 bases:
>100_bases CGACCGTTGCGTCGGGGCCCTCCGGGGCCGGACGAGGAGTGATCATGTCCTTCGCACAGGCAGTGCTCCAGCTGGCGATC GGGGTGTCCTTCGGCCTGCT
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MTSFLASGRLRGRGLIALAAAVAGSVVLAGCGGAAVSESKSSDEPIKIGVLLPYTGPFGLYGKPMEAALTARLKLDDFKV GDRSIELVFEDEATDPATAVSKANKLVDQDGVSAVVCCATGAATLAVGPILAERGIPQLGPIPNPDGLSEFATAAVAAPT AGHDAGKLGTYAATDLDYRSAVIVASDFAYGHEVAENFKKGFTEAGGSIVKEVYAPLGTSDFASYLSQLPDADVVFAGFA GADAIRFVQQYDKFGVKAKMPLIGHGPLVTELVLNQIGPAAVGVGAAFYYSSTLDNAENERFISTMKAANPDFVPSHFTA GAWASGSVLLDAIERAGDDATDGEKLAAAIRSTKIEAPWGPLAFDPDTGYAIAPTYYYTVESSATGLSHKIVTEIP
Sequences:
>Translated_396_residues MTSFLASGRLRGRGLIALAAAVAGSVVLAGCGGAAVSESKSSDEPIKIGVLLPYTGPFGLYGKPMEAALTARLKLDDFKV GDRSIELVFEDEATDPATAVSKANKLVDQDGVSAVVCCATGAATLAVGPILAERGIPQLGPIPNPDGLSEFATAAVAAPT AGHDAGKLGTYAATDLDYRSAVIVASDFAYGHEVAENFKKGFTEAGGSIVKEVYAPLGTSDFASYLSQLPDADVVFAGFA GADAIRFVQQYDKFGVKAKMPLIGHGPLVTELVLNQIGPAAVGVGAAFYYSSTLDNAENERFISTMKAANPDFVPSHFTA GAWASGSVLLDAIERAGDDATDGEKLAAAIRSTKIEAPWGPLAFDPDTGYAIAPTYYYTVESSATGLSHKIVTEIP >Mature_395_residues TSFLASGRLRGRGLIALAAAVAGSVVLAGCGGAAVSESKSSDEPIKIGVLLPYTGPFGLYGKPMEAALTARLKLDDFKVG DRSIELVFEDEATDPATAVSKANKLVDQDGVSAVVCCATGAATLAVGPILAERGIPQLGPIPNPDGLSEFATAAVAAPTA GHDAGKLGTYAATDLDYRSAVIVASDFAYGHEVAENFKKGFTEAGGSIVKEVYAPLGTSDFASYLSQLPDADVVFAGFAG ADAIRFVQQYDKFGVKAKMPLIGHGPLVTELVLNQIGPAAVGVGAAFYYSSTLDNAENERFISTMKAANPDFVPSHFTAG AWASGSVLLDAIERAGDDATDGEKLAAAIRSTKIEAPWGPLAFDPDTGYAIAPTYYYTVESSATGLSHKIVTEIP
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
None
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 40826; Mature: 40695
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSFLASGRLRGRGLIALAAAVAGSVVLAGCGGAAVSESKSSDEPIKIGVLLPYTGPFGL CCCCCCCCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCC YGKPMEAALTARLKLDDFKVGDRSIELVFEDEATDPATAVSKANKLVDQDGVSAVVCCAT CCCCHHHHHEEEEEECCEECCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECC GAATLAVGPILAERGIPQLGPIPNPDGLSEFATAAVAAPTAGHDAGKLGTYAATDLDYRS CCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCC AVIVASDFAYGHEVAENFKKGFTEAGGSIVKEVYAPLGTSDFASYLSQLPDADVVFAGFA EEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEECC GADAIRFVQQYDKFGVKAKMPLIGHGPLVTELVLNQIGPAAVGVGAAFYYSSTLDNAENE CHHHHHHHHHHHHCCCEECCCEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCH RFISTMKAANPDFVPSHFTAGAWASGSVLLDAIERAGDDATDGEKLAAAIRSTKIEAPWG HHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCC PLAFDPDTGYAIAPTYYYTVESSATGLSHKIVTEIP CEEECCCCCCEECCEEEEEECCCCCCCCCCEEECCC >Mature Secondary Structure TSFLASGRLRGRGLIALAAAVAGSVVLAGCGGAAVSESKSSDEPIKIGVLLPYTGPFGL CCCCCCCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCC YGKPMEAALTARLKLDDFKVGDRSIELVFEDEATDPATAVSKANKLVDQDGVSAVVCCAT CCCCHHHHHEEEEEECCEECCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECC GAATLAVGPILAERGIPQLGPIPNPDGLSEFATAAVAAPTAGHDAGKLGTYAATDLDYRS CCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCC AVIVASDFAYGHEVAENFKKGFTEAGGSIVKEVYAPLGTSDFASYLSQLPDADVVFAGFA EEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEECC GADAIRFVQQYDKFGVKAKMPLIGHGPLVTELVLNQIGPAAVGVGAAFYYSSTLDNAENE CHHHHHHHHHHHHCCCEECCCEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCH RFISTMKAANPDFVPSHFTAGAWASGSVLLDAIERAGDDATDGEKLAAAIRSTKIEAPWG HHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCC PLAFDPDTGYAIAPTYYYTVESSATGLSHKIVTEIP CEEECCCCCCEECCEEEEEECCCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA