| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714973
Identifier: 119714973
GI number: 119714973
Start: 774402
End: 775625
Strand: Direct
Name: 119714973
Synonym: Noca_0726
Alternate gene names: NA
Gene position: 774402-775625 (Clockwise)
Preceding gene: 119714972
Following gene: 119714974
Centisome position: 15.53
GC content: 72.55
Gene sequence:
>1224_bases ATGGCCGAGCCCCTGCTGCGCGCGCTGAACCGGATGCGCGACCACCTCCTCGACCCCGACGCACTCGTCAAGGCGGTGGC GTCCGGGCGGCAGAAGGGCACCCAGCCCACGTGGCGGCGCGCCGAGCTGCGCTACGTCGACCTGAAGGCCGGCCGGCACC TCCAGGTCACGACGTACGACGACACCCAGGCGCACACCGCGAACCACGCGCTGGCCCCCTCCGACGGGGCGAGCGCGGCT CGGGAGGCGGTCGACACCCTGCTCGACGAGCCGTTCGGCAACTGGCACGTCGACACCACCACGCAGAGCCACCAGCTGCG GGTGACCAAGAAGCTCGAGGCGGTCGTCCACACGACCGACCGGGCCCAGCCGGTCGAGATCGAGCGCGGCCACGACCGCG ACAAGCCTCGGCTGCTGCCCGAGGACGACCCGGTGTTCGTGGCGCTGGGCATCTCCGACGAGTCCGGTCGGCTCAAGCCG AGCCGCCAGGCGAAGTATCGGCAGGTCGAGGAGTTCCTGCGGCTGCTGGACTCCTCGATCACCGACGCCCTGGACAAGGG CCATCTGCGCCGGCCGACCGCCGAGGAGCCGCTGCGCATCGCCGACCTCGGGTGCGGCAACGCCTACCTGACGTTTGCGG CACAGCGGTTCCTCACGGGCGTCCGCGGGCTCCCGGTCCGGCTGACCGGCGTCGACGTCAAGGAGCAGTCCCGCGAGCAC AACGCGGCCGTGGCCGAGCGCCTGGGGGTCGGCGCGAGCTTCGTCGTCGGCACGATCGGTGGCGTCACGCTCGACCCGCC ACCGGAGGTGGTGCTGGCCCTGCATGCTTGCGACACCGCGACCGACGAGGCGCTCGCCCAGGCGGTGTCCTGGGAGGCCC AGCTGGTACTGGCCGCGCCGTGCTGCCACCACGACATCGCCGCGCAGCTGCGCCGCTCGCCGACGCCCTCGCCGTACGCG ATGATCACCCGCCACGGGATCCTCCGCGAGCGGCTGGCCGACACGCTCACCGACGCGCTGCGCGCCTCACTGATGCGCCA GCAGGGGTACCGCGTCGATGTCGTGCAGTTCGTGGAGAGCCAGCACACCCCGCGCAACACCATGCTGCGCGCGGTCCGCA CCGGAGCTCCGGTCACGGGTGGCTCGGTGCGCAAGGAGTACGACGAGCTCGTCGACACCTGGGGCATCAGCCCCGCCTTG GCCCGGCTGCTCGACGCCCGCTGA
Upstream 100 bases:
>100_bases GCTTCTAGGCTGGAGGGGTGAACCCCCGGCACCGTCGTCTCGTCATCCCGATCGCGCTGGCGGCGCTGCTCGTCATCGTC GTGATCGCGGCCGTGCTCTG
Downstream 100 bases:
>100_bases TGCTCGACCGGGTCCTCGGTCTCGCCTCGGCCGCCTCGTTCCTGGTCGGGTCGCTCGCCGGGCCCGCCGAGCCGCACGCG ACCGTCGACCTGACCTTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: SAM-Dependent Methyltransferase; SAM Dependent Methyltransferase; Sam-Dependent Methyltransferase; Conserved Domain Protein; Sam Dependent Methyltransferase
Number of amino acids: Translated: 407; Mature: 406
Protein sequence:
>407_residues MAEPLLRALNRMRDHLLDPDALVKAVASGRQKGTQPTWRRAELRYVDLKAGRHLQVTTYDDTQAHTANHALAPSDGASAA REAVDTLLDEPFGNWHVDTTTQSHQLRVTKKLEAVVHTTDRAQPVEIERGHDRDKPRLLPEDDPVFVALGISDESGRLKP SRQAKYRQVEEFLRLLDSSITDALDKGHLRRPTAEEPLRIADLGCGNAYLTFAAQRFLTGVRGLPVRLTGVDVKEQSREH NAAVAERLGVGASFVVGTIGGVTLDPPPEVVLALHACDTATDEALAQAVSWEAQLVLAAPCCHHDIAAQLRRSPTPSPYA MITRHGILRERLADTLTDALRASLMRQQGYRVDVVQFVESQHTPRNTMLRAVRTGAPVTGGSVRKEYDELVDTWGISPAL ARLLDAR
Sequences:
>Translated_407_residues MAEPLLRALNRMRDHLLDPDALVKAVASGRQKGTQPTWRRAELRYVDLKAGRHLQVTTYDDTQAHTANHALAPSDGASAA REAVDTLLDEPFGNWHVDTTTQSHQLRVTKKLEAVVHTTDRAQPVEIERGHDRDKPRLLPEDDPVFVALGISDESGRLKP SRQAKYRQVEEFLRLLDSSITDALDKGHLRRPTAEEPLRIADLGCGNAYLTFAAQRFLTGVRGLPVRLTGVDVKEQSREH NAAVAERLGVGASFVVGTIGGVTLDPPPEVVLALHACDTATDEALAQAVSWEAQLVLAAPCCHHDIAAQLRRSPTPSPYA MITRHGILRERLADTLTDALRASLMRQQGYRVDVVQFVESQHTPRNTMLRAVRTGAPVTGGSVRKEYDELVDTWGISPAL ARLLDAR >Mature_406_residues AEPLLRALNRMRDHLLDPDALVKAVASGRQKGTQPTWRRAELRYVDLKAGRHLQVTTYDDTQAHTANHALAPSDGASAAR EAVDTLLDEPFGNWHVDTTTQSHQLRVTKKLEAVVHTTDRAQPVEIERGHDRDKPRLLPEDDPVFVALGISDESGRLKPS RQAKYRQVEEFLRLLDSSITDALDKGHLRRPTAEEPLRIADLGCGNAYLTFAAQRFLTGVRGLPVRLTGVDVKEQSREHN AAVAERLGVGASFVVGTIGGVTLDPPPEVVLALHACDTATDEALAQAVSWEAQLVLAAPCCHHDIAAQLRRSPTPSPYAM ITRHGILRERLADTLTDALRASLMRQQGYRVDVVQFVESQHTPRNTMLRAVRTGAPVTGGSVRKEYDELVDTWGISPALA RLLDAR
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44799; Mature: 44668
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEPLLRALNRMRDHLLDPDALVKAVASGRQKGTQPTWRRAELRYVDLKAGRHLQVTTYD CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHCEEEEEEECCCCEEEEEECC DTQAHTANHALAPSDGASAAREAVDTLLDEPFGNWHVDTTTQSHQLRVTKKLEAVVHTTD CCCHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHCCC RAQPVEIERGHDRDKPRLLPEDDPVFVALGISDESGRLKPSRQAKYRQVEEFLRLLDSSI CCCCEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH TDALDKGHLRRPTAEEPLRIADLGCGNAYLTFAAQRFLTGVRGLPVRLTGVDVKEQSREH HHHHHCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHH NAAVAERLGVGASFVVGTIGGVTLDPPPEVVLALHACDTATDEALAQAVSWEAQLVLAAP HHHHHHHHCCCHHHHHHCCCCCCCCCCHHHEEEEECCCCCHHHHHHHHHCCCCEEEEECC CCHHDIAAQLRRSPTPSPYAMITRHGILRERLADTLTDALRASLMRQQGYRVDVVQFVES CHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH QHTPRNTMLRAVRTGAPVTGGSVRKEYDELVDTWGISPALARLLDAR CCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCC >Mature Secondary Structure AEPLLRALNRMRDHLLDPDALVKAVASGRQKGTQPTWRRAELRYVDLKAGRHLQVTTYD CCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHCEEEEEEECCCCEEEEEECC DTQAHTANHALAPSDGASAAREAVDTLLDEPFGNWHVDTTTQSHQLRVTKKLEAVVHTTD CCCHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHCCC RAQPVEIERGHDRDKPRLLPEDDPVFVALGISDESGRLKPSRQAKYRQVEEFLRLLDSSI CCCCEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH TDALDKGHLRRPTAEEPLRIADLGCGNAYLTFAAQRFLTGVRGLPVRLTGVDVKEQSREH HHHHHCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHH NAAVAERLGVGASFVVGTIGGVTLDPPPEVVLALHACDTATDEALAQAVSWEAQLVLAAP HHHHHHHHCCCHHHHHHCCCCCCCCCCHHHEEEEECCCCCHHHHHHHHHCCCCEEEEECC CCHHDIAAQLRRSPTPSPYAMITRHGILRERLADTLTDALRASLMRQQGYRVDVVQFVES CHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH QHTPRNTMLRAVRTGAPVTGGSVRKEYDELVDTWGISPALARLLDAR CCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA