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The map label for this gene is fprB [H]

Identifier: 119714883

GI number: 119714883

Start: 670808

End: 672442

Strand: Direct

Name: fprB [H]

Synonym: Noca_0635

Alternate gene names: 119714883

Gene position: 670808-672442 (Clockwise)

Preceding gene: 119714879

Following gene: 119714884

Centisome position: 13.45

GC content: 64.22

Gene sequence:

>1635_bases
ATGACCTTTGTTATTACCCAGTCTTGTTGTGAGGACGCCGCCTGTGTCACGGTTTGTCCTGTCCAGTGCATCCGCCCTCG
ACCTGGTGATCCGGACTTCGAGAGCACGGAACAGCTCTACATCGATCCGTCGAGCTGCATCGATTGCGGCGCTTGCGCCA
CCGCATGTCCAGTTGACGCCATCTACCCCGGAGACGCACTTCCTCCGAGCCTCTCCACGTTCAGCGCGGTCAACGCCGAG
TACTTCGAGGCGCGTCCGTTGACGCCGGCTGAACCACCGGTGATCTCCCGCAATCGTCTTACCCTCGGCCAGTCGACGCT
GATGGTCGCGGTGATCGGATCGGGACCCGCTGCCCTGTACGCGGCGACCGAGTTGACCGAGATCCCCGGCGTCGAAGTGA
CCATCATCGAGCGACTCCCGACTCCCTTCGGATTGATACGTTCAGGAGTCGCGCCCGACCACGACAACACCAAGCGCATC
GCTGACAGGCTCGGGCGCGTCCTGGTCCGGCCCAACGTGCGTTGTCTCTTCGACGTGGAGGTTGGACGCGACATCTCGAT
CGCGGAAGTGCTGCAGCATCACCACGCTGTCATCGTGGCAACAGGCGCAGCGAGCGCACGACGCCCAGGTGTCCCCGGAG
AAGCCCTCGCCGGTTCTGTCTCAGCCAAAGAGTTCGTCTCTTGGTACAACGGTCACCCTGACAGCGCACTACCGGACTTC
AGCATCAAGGGGCCGAGGGCGGTCGTTATCGGCAACGGCAACGTGGCTCTGGACGTCGCGCGTCTGCTCGCGCAGCGAGC
GACCGCGTACGCGTCCACTTCGGTGTCCGACTCCGCACTAAGGTCGCTAACCGCCGGCAGCATCGAGGAAGTGGCCGTCG
TCGGACGCAGGTCCCAAGCCTTCGCCGCTTACAGCACAGCTGAGTTGACGGCGCTAACGCACCTGCCGGACGTGGATCTG
GTCGCGGAGGCGAGTGAAATTGCTGTCACGGACGATGACTGGGCCGCTGCTTCCCAGTCAGGCCGCGGGTGGGCCCTGGC
TCGCCGATACGACATTGTCGCCGAGGCTGCCGCTCGCACTTGCACACGGCCTCGACGGATCATCCTGCGTTACGGTCTGA
CGCCGGTGGCACTGTTGGGCCAGCACGAGGTCACAGGCATCGAACTGACCCGGCATGACGGGACCAAGGAGGTCATCGAG
ACCTCGTTGGTCATCTGGGCTGTGGGATTCACTGGACAGCCGATCGACGGACTGCCATTCGATGGGGACAGGGGAGTACT
TCCGAATCGCGAGGGTCGGGTGATCGACCTCCGCGGCGGGCGCCCCGTGCCGGGGGTGTATTGCACCGGTTGGGCGAAAC
GCGGGGCCTCAGGGGTGATCGGGACGAATCGGGTCGATGCGGCCGAAACAGTTGCGTCATTGATGGAGGACTTGAAGAAC
GGACGCTTAGCAGATCCGCGCGGCGGCCCGGAATCGTTCGCAGACCTCGCTCGGTTGCGACGACCCCGCCTGCTTGAGGT
CGACGGTTGGCGGCGCATCGATGACGCCGAGGTGGATGCAGGGCGCGACCAAGGCCGCACTCGGGTCAAGTTCGTGACGT
GGTCGGGCCTCCGCGACGCAGGTCATAACGACTGA

Upstream 100 bases:

>100_bases
TTCCACACAATCGTGCCGTTGGCCTTATGACACCTGGCAGTGCTGTAGCGGTTCGCCTTGGGCGAGCCTGAGCCGACTAG
TTCTGAGAGAGGCGCGCTGG

Downstream 100 bases:

>100_bases
TCGCCCTCAACGAGGCCGGCATTGAACTCATCCCCCCTGAACGCAGTGCACGCGCAAACTCCGACAGCTTTTTTTCGGAC
AGTGAGTAAGACGGCGCGCA

Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein

Products: NA

Alternate protein names: FNR [H]

Number of amino acids: Translated: 544; Mature: 543

Protein sequence:

>544_residues
MTFVITQSCCEDAACVTVCPVQCIRPRPGDPDFESTEQLYIDPSSCIDCGACATACPVDAIYPGDALPPSLSTFSAVNAE
YFEARPLTPAEPPVISRNRLTLGQSTLMVAVIGSGPAALYAATELTEIPGVEVTIIERLPTPFGLIRSGVAPDHDNTKRI
ADRLGRVLVRPNVRCLFDVEVGRDISIAEVLQHHHAVIVATGAASARRPGVPGEALAGSVSAKEFVSWYNGHPDSALPDF
SIKGPRAVVIGNGNVALDVARLLAQRATAYASTSVSDSALRSLTAGSIEEVAVVGRRSQAFAAYSTAELTALTHLPDVDL
VAEASEIAVTDDDWAAASQSGRGWALARRYDIVAEAAARTCTRPRRIILRYGLTPVALLGQHEVTGIELTRHDGTKEVIE
TSLVIWAVGFTGQPIDGLPFDGDRGVLPNREGRVIDLRGGRPVPGVYCTGWAKRGASGVIGTNRVDAAETVASLMEDLKN
GRLADPRGGPESFADLARLRRPRLLEVDGWRRIDDAEVDAGRDQGRTRVKFVTWSGLRDAGHND

Sequences:

>Translated_544_residues
MTFVITQSCCEDAACVTVCPVQCIRPRPGDPDFESTEQLYIDPSSCIDCGACATACPVDAIYPGDALPPSLSTFSAVNAE
YFEARPLTPAEPPVISRNRLTLGQSTLMVAVIGSGPAALYAATELTEIPGVEVTIIERLPTPFGLIRSGVAPDHDNTKRI
ADRLGRVLVRPNVRCLFDVEVGRDISIAEVLQHHHAVIVATGAASARRPGVPGEALAGSVSAKEFVSWYNGHPDSALPDF
SIKGPRAVVIGNGNVALDVARLLAQRATAYASTSVSDSALRSLTAGSIEEVAVVGRRSQAFAAYSTAELTALTHLPDVDL
VAEASEIAVTDDDWAAASQSGRGWALARRYDIVAEAAARTCTRPRRIILRYGLTPVALLGQHEVTGIELTRHDGTKEVIE
TSLVIWAVGFTGQPIDGLPFDGDRGVLPNREGRVIDLRGGRPVPGVYCTGWAKRGASGVIGTNRVDAAETVASLMEDLKN
GRLADPRGGPESFADLARLRRPRLLEVDGWRRIDDAEVDAGRDQGRTRVKFVTWSGLRDAGHND
>Mature_543_residues
TFVITQSCCEDAACVTVCPVQCIRPRPGDPDFESTEQLYIDPSSCIDCGACATACPVDAIYPGDALPPSLSTFSAVNAEY
FEARPLTPAEPPVISRNRLTLGQSTLMVAVIGSGPAALYAATELTEIPGVEVTIIERLPTPFGLIRSGVAPDHDNTKRIA
DRLGRVLVRPNVRCLFDVEVGRDISIAEVLQHHHAVIVATGAASARRPGVPGEALAGSVSAKEFVSWYNGHPDSALPDFS
IKGPRAVVIGNGNVALDVARLLAQRATAYASTSVSDSALRSLTAGSIEEVAVVGRRSQAFAAYSTAELTALTHLPDVDLV
AEASEIAVTDDDWAAASQSGRGWALARRYDIVAEAAARTCTRPRRIILRYGLTPVALLGQHEVTGIELTRHDGTKEVIET
SLVIWAVGFTGQPIDGLPFDGDRGVLPNREGRVIDLRGGRPVPGVYCTGWAKRGASGVIGTNRVDAAETVASLMEDLKNG
RLADPRGGPESFADLARLRRPRLLEVDGWRRIDDAEVDAGRDQGRTRVKFVTWSGLRDAGHND

Specific function: NITROGEN METABOLISM, GLUTAMATE BIOSYNTHESIS. THE CATALYZED REACTION BRINGS TOGETHER THE NITROGEN AND CARBON METABOLISM. [C]

COG id: COG0493

COG function: function code ER; NADPH-dependent glutamate synthase beta chain and related oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Homo sapiens, GI111118981, Length=479, Percent_Identity=33.1941544885177, Blast_Score=225, Evalue=9e-59,
Organism=Homo sapiens, GI111118983, Length=485, Percent_Identity=32.7835051546392, Blast_Score=220, Evalue=3e-57,
Organism=Escherichia coli, GI1789606, Length=230, Percent_Identity=26.0869565217391, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI87082180, Length=200, Percent_Identity=27.5, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1788811, Length=160, Percent_Identity=31.25, Blast_Score=64, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17543860, Length=439, Percent_Identity=26.4236902050114, Blast_Score=174, Evalue=2e-43,
Organism=Caenorhabditis elegans, GI17570289, Length=155, Percent_Identity=31.6129032258064, Blast_Score=67, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6320584, Length=486, Percent_Identity=28.3950617283951, Blast_Score=168, Evalue=2e-42,
Organism=Drosophila melanogaster, GI17137178, Length=457, Percent_Identity=31.0722100656455, Blast_Score=204, Evalue=1e-52,

Paralogues:

None

Copy number: 620 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR013027
- InterPro:   IPR021163
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00037 Fer4; PF07992 Pyr_redox_2 [H]

EC number: =1.18.1.2 [H]

Molecular weight: Translated: 57981; Mature: 57850

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFVITQSCCEDAACVTVCPVQCIRPRPGDPDFESTEQLYIDPSSCIDCGACATACPVDA
CEEEEEHHHCCCCCEEEECCHHHCCCCCCCCCCCCCCEEEECCHHHCCCCCHHHHCCCCC
IYPGDALPPSLSTFSAVNAEYFEARPLTPAEPPVISRNRLTLGQSTLMVAVIGSGPAALY
CCCCCCCCCCCHHHHHCCCHHHCCCCCCCCCCCCCCCCEEEECCCEEEEEEECCCCEEEE
AATELTEIPGVEVTIIERLPTPFGLIRSGVAPDHDNTKRIADRLGRVLVRPNVRCLFDVE
EEHHHHHCCCCEEEEEECCCCCHHHHHCCCCCCCCCHHHHHHHHCCEEECCCCEEEEEEC
VGRDISIAEVLQHHHAVIVATGAASARRPGVPGEALAGSVSAKEFVSWYNGHPDSALPDF
CCCCCCHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHCCCCHHHHHHHHCCCCCCCCCCC
SIKGPRAVVIGNGNVALDVARLLAQRATAYASTSVSDSALRSLTAGSIEEVAVVGRRSQA
CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHCCCCHH
FAAYSTAELTALTHLPDVDLVAEASEIAVTDDDWAAASQSGRGWALARRYDIVAEAAART
EEEECHHHEEEECCCCCCHHHCCCCCEEEECCCHHHCCCCCCCEEEHHHHHHHHHHHHHH
CTRPRRIILRYGLTPVALLGQHEVTGIELTRHDGTKEVIETSLVIWAVGFTGQPIDGLPF
CCCCHHEEEECCCCCEEEECCCCCCEEEEECCCCHHHHHHHEEEEEEECCCCCCCCCCCC
DGDRGVLPNREGRVIDLRGGRPVPGVYCTGWAKRGASGVIGTNRVDAAETVASLMEDLKN
CCCCCCCCCCCCCEEEECCCCCCCCEEECCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHC
GRLADPRGGPESFADLARLRRPRLLEVDGWRRIDDAEVDAGRDQGRTRVKFVTWSGLRDA
CCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCC
GHND
CCCC
>Mature Secondary Structure 
TFVITQSCCEDAACVTVCPVQCIRPRPGDPDFESTEQLYIDPSSCIDCGACATACPVDA
EEEEEHHHCCCCCEEEECCHHHCCCCCCCCCCCCCCEEEECCHHHCCCCCHHHHCCCCC
IYPGDALPPSLSTFSAVNAEYFEARPLTPAEPPVISRNRLTLGQSTLMVAVIGSGPAALY
CCCCCCCCCCCHHHHHCCCHHHCCCCCCCCCCCCCCCCEEEECCCEEEEEEECCCCEEEE
AATELTEIPGVEVTIIERLPTPFGLIRSGVAPDHDNTKRIADRLGRVLVRPNVRCLFDVE
EEHHHHHCCCCEEEEEECCCCCHHHHHCCCCCCCCCHHHHHHHHCCEEECCCCEEEEEEC
VGRDISIAEVLQHHHAVIVATGAASARRPGVPGEALAGSVSAKEFVSWYNGHPDSALPDF
CCCCCCHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHCCCCHHHHHHHHCCCCCCCCCCC
SIKGPRAVVIGNGNVALDVARLLAQRATAYASTSVSDSALRSLTAGSIEEVAVVGRRSQA
CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHCCCCHH
FAAYSTAELTALTHLPDVDLVAEASEIAVTDDDWAAASQSGRGWALARRYDIVAEAAART
EEEECHHHEEEECCCCCCHHHCCCCCEEEECCCHHHCCCCCCCEEEHHHHHHHHHHHHHH
CTRPRRIILRYGLTPVALLGQHEVTGIELTRHDGTKEVIETSLVIWAVGFTGQPIDGLPF
CCCCHHEEEECCCCCEEEECCCCCCEEEEECCCCHHHHHHHEEEEEEECCCCCCCCCCCC
DGDRGVLPNREGRVIDLRGGRPVPGVYCTGWAKRGASGVIGTNRVDAAETVASLMEDLKN
CCCCCCCCCCCCCEEEECCCCCCCCEEECCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHC
GRLADPRGGPESFADLARLRRPRLLEVDGWRRIDDAEVDAGRDQGRTRVKFVTWSGLRDA
CCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCC
GHND
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]