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The map label for this gene is 119714842

Identifier: 119714842

GI number: 119714842

Start: 614126

End: 615679

Strand: Direct

Name: 119714842

Synonym: Noca_0581

Alternate gene names: NA

Gene position: 614126-615679 (Clockwise)

Preceding gene: 119714840

Following gene: 119714843

Centisome position: 12.32

GC content: 68.79

Gene sequence:

>1554_bases
TTGAAGTCTGCCGAGGAGATCATGAAAATCTTGGATGCCTACGACCTGACAGGGTCGTTGCGTGATGCCGGGGAGCTGGC
CGGCTGCTCCCACCACACCGTCAAGCGCTACGTCGTGCGGCGTGCTGGTGCCGGTGAGCTGGACAAGGCGGCCGTGCGGC
CGCAGCTGATCGATGAGTACCTGCCCAAGGTCGAGGAGTGGGTCGAGCGGTCCAAGGGCAAGGTCCGCGCCGACAAGGCC
CACGAGAAGCTCGTGGCGCTGGGCTACACCGGTTCGGAGCGCACCACCCGCCGTGCGGTCGCGAAGGTCAAGGCTGCCTA
CCGCGCGGGACATGTGCGGGTCCACCGGCCGTGGGTCACCGAGCCGGGGATGTGGCTGCAGTACGACTACGGCGACGGTC
CGGTCGTCGACGGGGTGAAGACCGTGCTGTTCGTCGCGTGGTTGGCGTGGTCGCGGTTCCGGGTGGTGATCGCGCTGCGT
GACAAGACGATGCCGTCGGTGTTCGCCGCTCTGGACCAGACGTTCCGGCGTCTGGGTGGGGTGCCGACCTATGTGCTGAC
CGACAACGAGAAGACCGTCACGGTCGAGCACATCGCCGGGATCCCGGTCCGCAACTCACAGCTCGTCGGGTTCGCCGAGC
ACTACTCGGTGGTCGTGCATACCTGTGTTCCCGCGGACCCGGCGTCCAAGGGCGGCACCGAGTCGTCGGTGAAGATCAGC
AAGGCCGATCTGGTCCCCAAGGACACCAACCTGCGAGAAGAGTACGGCTCGTTCGCCGAGCTCGAGGCAGCCTGCGAGGA
GTTCTGTCACAAGGTCAACACCCGCGACCATCGGATCACGAAGCGGCCGCCGATCGAGATGCTCGCCGAGGAACGGACCC
GGCTGCACCCGGTGGCGATGACGCCGCACACGGTGGCGTTCGGTACCACCCGGGTGGTGCCGGCGAACACGCCGATGGTG
ATGTTCGAGTCCGGCCAGTACTCGGTCCCGCACGCCCTGCTGGGCGCCACGGTGTGGGTGCGGGTGCATGGCCGCGGGGG
CGACGAGCAGGTCGTCATCGTCCACGTCGGCCAGGACGGTCCGGTCGAGGTTGCCCGCCACCACCGGGCCACCCCCGGCA
CACCACGGATCAACGATGACCACTTCCCGCCGCAACCAGCGGGGCCGCTGGATCGCCGACCACGCGCGAAGAACCCGGCG
GAGTCGGAGTTCCTCGACCTGGGCGAGGGTGCCCGGCTGTGGCTGATCGAGGCCGCTGCGGCGGGCACCGGTCGGATGCG
GGTCAAGATGTCCGAAGCGCTCGCGCTGGCCAAGTTGTTCGACCCCGTCGAGGTCGACTGGGCACTCGGCCATGCCGCGG
TCCACGGCCGGTTCGCCGAGGCCGACCTGGCCTCGATCCTGGACCATCACGCCCGCCGACCCGCAGGCGGTGAGCACCGC
GCCAGCGAGGACTCCTCGTTGACCCAGGGCACCAGCGCGTGGTCGCGACTGGGCCAGCAGGTCGGCCAGCAGGTCGGCCA
GCAGGTCGAGGCCGACAGCGAGGTGACCCGATGA

Upstream 100 bases:

>100_bases
CACGACGTTGTCTGCCTTGCCGCGGTCCGCGGTTGAGGCCCCTTCCTCGGGTGCGATGAGCGGTGCTGATGCGCCCTATT
GCTCCCGAGGAAGGGATGAG

Downstream 100 bases:

>100_bases
CCGCCAGGACAGCGCAAGCGCCGCCGCTGCCAGCGGACTTGGAGGAGTTGCTGCGCCGGCTGCGGCTGCCTCACATCCGT
CGTCACGCCCCCGAGGTCGT

Product: integrase catalytic subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 517; Mature: 517

Protein sequence:

>517_residues
MKSAEEIMKILDAYDLTGSLRDAGELAGCSHHTVKRYVVRRAGAGELDKAAVRPQLIDEYLPKVEEWVERSKGKVRADKA
HEKLVALGYTGSERTTRRAVAKVKAAYRAGHVRVHRPWVTEPGMWLQYDYGDGPVVDGVKTVLFVAWLAWSRFRVVIALR
DKTMPSVFAALDQTFRRLGGVPTYVLTDNEKTVTVEHIAGIPVRNSQLVGFAEHYSVVVHTCVPADPASKGGTESSVKIS
KADLVPKDTNLREEYGSFAELEAACEEFCHKVNTRDHRITKRPPIEMLAEERTRLHPVAMTPHTVAFGTTRVVPANTPMV
MFESGQYSVPHALLGATVWVRVHGRGGDEQVVIVHVGQDGPVEVARHHRATPGTPRINDDHFPPQPAGPLDRRPRAKNPA
ESEFLDLGEGARLWLIEAAAAGTGRMRVKMSEALALAKLFDPVEVDWALGHAAVHGRFAEADLASILDHHARRPAGGEHR
ASEDSSLTQGTSAWSRLGQQVGQQVGQQVEADSEVTR

Sequences:

>Translated_517_residues
MKSAEEIMKILDAYDLTGSLRDAGELAGCSHHTVKRYVVRRAGAGELDKAAVRPQLIDEYLPKVEEWVERSKGKVRADKA
HEKLVALGYTGSERTTRRAVAKVKAAYRAGHVRVHRPWVTEPGMWLQYDYGDGPVVDGVKTVLFVAWLAWSRFRVVIALR
DKTMPSVFAALDQTFRRLGGVPTYVLTDNEKTVTVEHIAGIPVRNSQLVGFAEHYSVVVHTCVPADPASKGGTESSVKIS
KADLVPKDTNLREEYGSFAELEAACEEFCHKVNTRDHRITKRPPIEMLAEERTRLHPVAMTPHTVAFGTTRVVPANTPMV
MFESGQYSVPHALLGATVWVRVHGRGGDEQVVIVHVGQDGPVEVARHHRATPGTPRINDDHFPPQPAGPLDRRPRAKNPA
ESEFLDLGEGARLWLIEAAAAGTGRMRVKMSEALALAKLFDPVEVDWALGHAAVHGRFAEADLASILDHHARRPAGGEHR
ASEDSSLTQGTSAWSRLGQQVGQQVGQQVEADSEVTR
>Mature_517_residues
MKSAEEIMKILDAYDLTGSLRDAGELAGCSHHTVKRYVVRRAGAGELDKAAVRPQLIDEYLPKVEEWVERSKGKVRADKA
HEKLVALGYTGSERTTRRAVAKVKAAYRAGHVRVHRPWVTEPGMWLQYDYGDGPVVDGVKTVLFVAWLAWSRFRVVIALR
DKTMPSVFAALDQTFRRLGGVPTYVLTDNEKTVTVEHIAGIPVRNSQLVGFAEHYSVVVHTCVPADPASKGGTESSVKIS
KADLVPKDTNLREEYGSFAELEAACEEFCHKVNTRDHRITKRPPIEMLAEERTRLHPVAMTPHTVAFGTTRVVPANTPMV
MFESGQYSVPHALLGATVWVRVHGRGGDEQVVIVHVGQDGPVEVARHHRATPGTPRINDDHFPPQPAGPLDRRPRAKNPA
ESEFLDLGEGARLWLIEAAAAGTGRMRVKMSEALALAKLFDPVEVDWALGHAAVHGRFAEADLASILDHHARRPAGGEHR
ASEDSSLTQGTSAWSRLGQQVGQQVGQQVEADSEVTR

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017894
- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 56821; Mature: 56821

Theoretical pI: Translated: 7.86; Mature: 7.86

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSAEEIMKILDAYDLTGSLRDAGELAGCSHHTVKRYVVRRAGAGELDKAAVRPQLIDEY
CCCHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHCCHHHHHHH
LPKVEEWVERSKGKVRADKAHEKLVALGYTGSERTTRRAVAKVKAAYRAGHVRVHRPWVT
HHHHHHHHHHCCCCEEHHHHHCEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEECCCCC
EPGMWLQYDYGDGPVVDGVKTVLFVAWLAWSRFRVVIALRDKTMPSVFAALDQTFRRLGG
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHCC
VPTYVLTDNEKTVTVEHIAGIPVRNSQLVGFAEHYSVVVHTCVPADPASKGGTESSVKIS
CCEEEEECCCCEEEEHHHCCCCCCCCCEEEHHHHCEEEEEEECCCCCCCCCCCCCCEEEE
KADLVPKDTNLREEYGSFAELEAACEEFCHKVNTRDHRITKRPPIEMLAEERTRLHPVAM
CCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCEEE
TPHTVAFGTTRVVPANTPMVMFESGQYSVPHALLGATVWVRVHGRGGDEQVVIVHVGQDG
CCCEEEECCEEEEECCCCEEEEECCCCCCCHHHHCCEEEEEEECCCCCCEEEEEEECCCC
PVEVARHHRATPGTPRINDDHFPPQPAGPLDRRPRAKNPAESEFLDLGEGARLWLIEAAA
CHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEEECC
AGTGRMRVKMSEALALAKLFDPVEVDWALGHAAVHGRFAEADLASILDHHARRPAGGEHR
CCCCEEEEEHHHHHHHHHHCCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCC
ASEDSSLTQGTSAWSRLGQQVGQQVGQQVEADSEVTR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCC
>Mature Secondary Structure
MKSAEEIMKILDAYDLTGSLRDAGELAGCSHHTVKRYVVRRAGAGELDKAAVRPQLIDEY
CCCHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHCCHHHHHHH
LPKVEEWVERSKGKVRADKAHEKLVALGYTGSERTTRRAVAKVKAAYRAGHVRVHRPWVT
HHHHHHHHHHCCCCEEHHHHHCEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEECCCCC
EPGMWLQYDYGDGPVVDGVKTVLFVAWLAWSRFRVVIALRDKTMPSVFAALDQTFRRLGG
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHCC
VPTYVLTDNEKTVTVEHIAGIPVRNSQLVGFAEHYSVVVHTCVPADPASKGGTESSVKIS
CCEEEEECCCCEEEEHHHCCCCCCCCCEEEHHHHCEEEEEEECCCCCCCCCCCCCCEEEE
KADLVPKDTNLREEYGSFAELEAACEEFCHKVNTRDHRITKRPPIEMLAEERTRLHPVAM
CCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCEEE
TPHTVAFGTTRVVPANTPMVMFESGQYSVPHALLGATVWVRVHGRGGDEQVVIVHVGQDG
CCCEEEECCEEEEECCCCEEEEECCCCCCCHHHHCCEEEEEEECCCCCCEEEEEEECCCC
PVEVARHHRATPGTPRINDDHFPPQPAGPLDRRPRAKNPAESEFLDLGEGARLWLIEAAA
CHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEEECC
AGTGRMRVKMSEALALAKLFDPVEVDWALGHAAVHGRFAEADLASILDHHARRPAGGEHR
CCCCEEEEEHHHHHHHHHHCCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCC
ASEDSSLTQGTSAWSRLGQQVGQQVGQQVEADSEVTR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2174857 [H]