| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is menA [H]
Identifier: 119714771
GI number: 119714771
Start: 537409
End: 538302
Strand: Reverse
Name: menA [H]
Synonym: Noca_0507
Alternate gene names: 119714771
Gene position: 538302-537409 (Counterclockwise)
Preceding gene: 119714776
Following gene: 119714769
Centisome position: 10.8
GC content: 75.28
Gene sequence:
>894_bases ATGCTTGAATCTCCGGTCGTGGCAACTCCCGACCAGTGGCTCGCCGGCGCGCGGCCTCGGACCCTGCCCGCGGCCGTCTC CCCGGTGCTGGCGGGCACCGGTGTCGCGGCGTACGCCGACGGCCTGGTGTGGTGGAAGGCGCTGCTCGCCCTCGTCGTGG CGCTCGCCCTGCAGGTCGCGGTCAACTACGCCAACGACTACTCCGACGGCATCCGCGGCACCGACGCGGACCGGGTCGGG CCGATGCGCCTGGTCGGGTCCGGCGCCGCCAGGCCCGCGGCCGTGAAGCGGGCCGCGTTCCTGGCGTTCGGGGTCGCCGC CGGCGCCGGGCTGGTGCTGGCGGCGACCACCGCGTGGTGGCTCGTCGCGGTCGGGCTGGTGTCGGTGCTGGCCGCCTGGT TCTACACCGGCGGGTCGAAGCCCTACGGTTACCTCGGGCTCGGCGAGGTGATGGTCTTCGTGTTCTTCGGGCTGGTCGCG GTGCTGGGGACGGCGTACGTCCAGACCGAGGCCTGGGAGTGGGCAGCCCTGTACGCAGCCGTCGGCGTGGGCACGCTGGC CTGCGCGATCCTGGTGGCCAACAACCTGCGCGACATCCCCACCGACGCCGTCGCCGGCAAGCGGACCCTCGCGGTGGTCC TCGGGGACCGGCGCACGCGCAGCCTCTTCCTGCTCCTGGTCGTGCTCGCCGCCGCCGCGGTGGTCGCGGTGGCAGCCACC ACCACGTGGTGGGCCCTGGCCGGTCTCGGCTTCCTGGTGCTCGCCGGGCCCGCTGCGCGGACCGTGCTCGGTGGCGCCGC CGGGCCCGGGCTGATCCCGGTGCTGCAGCAGACCGGCCTGGCCGAGCTGCTCTGGGCGGTGCTGGTCGCGGCCGCGCTGG TGGCCGGCGGCTGA
Upstream 100 bases:
>100_bases ACCACCCACGGTTCCGGGTCGTCGGCCGCCAGCCACCCGGCGACTGGTTCGACCACCGTGTCCACTCGGTCCACCTGGCT GAGGCTAGACGGTGCGATTG
Downstream 100 bases:
>100_bases TCGGGCCGGGGCGCCGGCCGGGTCGCCAGCCAGCACCGGCGTACCCTGGCGGCATGCTCTGGATCATCCTGCTGCTCGTC GTGGTGGCCGTCCTCGCCTA
Product: 1,4-dihydroxy-2-naphthoate octaprenyltransferase
Products: NA
Alternate protein names: DHNA-octaprenyltransferase [H]
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MLESPVVATPDQWLAGARPRTLPAAVSPVLAGTGVAAYADGLVWWKALLALVVALALQVAVNYANDYSDGIRGTDADRVG PMRLVGSGAARPAAVKRAAFLAFGVAAGAGLVLAATTAWWLVAVGLVSVLAAWFYTGGSKPYGYLGLGEVMVFVFFGLVA VLGTAYVQTEAWEWAALYAAVGVGTLACAILVANNLRDIPTDAVAGKRTLAVVLGDRRTRSLFLLLVVLAAAAVVAVAAT TTWWALAGLGFLVLAGPAARTVLGGAAGPGLIPVLQQTGLAELLWAVLVAAALVAGG
Sequences:
>Translated_297_residues MLESPVVATPDQWLAGARPRTLPAAVSPVLAGTGVAAYADGLVWWKALLALVVALALQVAVNYANDYSDGIRGTDADRVG PMRLVGSGAARPAAVKRAAFLAFGVAAGAGLVLAATTAWWLVAVGLVSVLAAWFYTGGSKPYGYLGLGEVMVFVFFGLVA VLGTAYVQTEAWEWAALYAAVGVGTLACAILVANNLRDIPTDAVAGKRTLAVVLGDRRTRSLFLLLVVLAAAAVVAVAAT TTWWALAGLGFLVLAGPAARTVLGGAAGPGLIPVLQQTGLAELLWAVLVAAALVAGG >Mature_297_residues MLESPVVATPDQWLAGARPRTLPAAVSPVLAGTGVAAYADGLVWWKALLALVVALALQVAVNYANDYSDGIRGTDADRVG PMRLVGSGAARPAAVKRAAFLAFGVAAGAGLVLAATTAWWLVAVGLVSVLAAWFYTGGSKPYGYLGLGEVMVFVFFGLVA VLGTAYVQTEAWEWAALYAAVGVGTLACAILVANNLRDIPTDAVAGKRTLAVVLGDRRTRSLFLLLVVLAAAAVVAVAAT TTWWALAGLGFLVLAGPAARTVLGGAAGPGLIPVLQQTGLAELLWAVLVAAALVAGG
Specific function: Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to dimethylmenaquinone (DMK). Attaches octaprenylpyrophosphate, a membrane-bound 40-carbon side chain to DHNA. The conversion of DHNA to DMK proceeds in three stages:the removal of the carboxyl group of DHNA
COG id: COG1575
COG function: function code H; 1,4-dihydroxy-2-naphthoate octaprenyltransferase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the menA family [H]
Homologues:
Organism=Homo sapiens, GI7019551, Length=233, Percent_Identity=28.3261802575107, Blast_Score=65, Evalue=6e-11, Organism=Escherichia coli, GI1790365, Length=297, Percent_Identity=36.026936026936, Blast_Score=149, Evalue=3e-37, Organism=Drosophila melanogaster, GI17737429, Length=220, Percent_Identity=27.2727272727273, Blast_Score=72, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004657 - InterPro: IPR000537 [H]
Pfam domain/function: PF01040 UbiA [H]
EC number: =2.5.1.74 [H]
Molecular weight: Translated: 30118; Mature: 30118
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLESPVVATPDQWLAGARPRTLPAAVSPVLAGTGVAAYADGLVWWKALLALVVALALQVA CCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VNYANDYSDGIRGTDADRVGPMRLVGSGAARPAAVKRAAFLAFGVAAGAGLVLAATTAWW HHHHHHHCCCCCCCCCCCCCCHHEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHH LVAVGLVSVLAAWFYTGGSKPYGYLGLGEVMVFVFFGLVAVLGTAYVQTEAWEWAALYAA HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGVGTLACAILVANNLRDIPTDAVAGKRTLAVVLGDRRTRSLFLLLVVLAAAAVVAVAAT HHHHHHHHHHHHHHCCCCCCCHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH TTWWALAGLGFLVLAGPAARTVLGGAAGPGLIPVLQQTGLAELLWAVLVAAALVAGG HHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLESPVVATPDQWLAGARPRTLPAAVSPVLAGTGVAAYADGLVWWKALLALVVALALQVA CCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VNYANDYSDGIRGTDADRVGPMRLVGSGAARPAAVKRAAFLAFGVAAGAGLVLAATTAWW HHHHHHHCCCCCCCCCCCCCCHHEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHH LVAVGLVSVLAAWFYTGGSKPYGYLGLGEVMVFVFFGLVAVLGTAYVQTEAWEWAALYAA HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGVGTLACAILVANNLRDIPTDAVAGKRTLAVVLGDRRTRSLFLLLVVLAAAAVVAVAAT HHHHHHHHHHHHHHCCCCCCCHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH TTWWALAGLGFLVLAGPAARTVLGGAAGPGLIPVLQQTGLAELLWAVLVAAALVAGG HHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]