| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714754
Identifier: 119714754
GI number: 119714754
Start: 520088
End: 520981
Strand: Reverse
Name: 119714754
Synonym: Noca_0490
Alternate gene names: NA
Gene position: 520981-520088 (Counterclockwise)
Preceding gene: 119714762
Following gene: 119714753
Centisome position: 10.45
GC content: 75.17
Gene sequence:
>894_bases GTGACCCCGGCGCACGACAGGCGAGCCCGCCCGCGGAACCTCCAGCTGCGGTCCGTGCTCGCCGGCGAGGCCGCCGCGGC GGCCGCCGAGGTGGAGTCCGCGCTCACCCCGCCGCTCGACCCGGTCGCCGCGGCCTTCTTCGACGTCGACAACACCGTGA TGCAGGGGGCGAGCATCTTCCACCTCGCCCGCGGCCTGCACCGCCGCAAGTTCTTCACCACCCGCGAGATCCTCGGGGCC GCCTGGAAGCAGGCCTACTTCCGGGTCGTGGGCGTCGAGGACCCCGCCCACGTGGCCGACGCTCGGGCCTCCGCCCTCGG GTTCATCGCCGGACACACCGTCACGGAGCTCCAGGACCTCGGCGAGGAGATCTTCGAGGAGGCGATGGCGGACCGGATCT GGCCGGGCACCCGCGCCCTGGCGCAGCTGCACCTCGACGAGGGCCAGCGGGTCTGGCTGGTCACCGCCGCGCCGATCGAG ATCGCGCAGATCATCGCGCGCCGACTCGGCCTCACCGGCGCGCTCGGCACGGTCGCCGAGCACATCGACGGCGTCTACAC CGGCCGGCTCGTCGGCGACCTGCTGCACGGGCCAGCGAAGGGCGAGGCCGTCCGTGCCCTCGCCGCCCGCGAGGGTCTCG ACCTGCATCGCTGCTCGGCGTACTCCGACTCCTTCAACGACCTGCCGATGCTGACCATGGTCGGCGACCCGTGCGCCATC AACCCGGACGCCCGGCTCCGGGCCCACGCCCGGGAGCAGGGCTGGCGGATCCACGACTACCGCACCGGGCGCAAGGCGCT GCGCGCCGGCCTGGTCGCGGGCGGCATCGCCGGCGCCGCCAGCGGCACGGTCGCCGCCGGCCTGGCGCTCCGCGGCCGGC GGTTTCCCCGGTGA
Upstream 100 bases:
>100_bases GCGGCGGCAACGCTCACGAGCTCGGCGATGTCGCGCATCCCAGACATAGGGGGATACTTCCACACCGCGTCCGGCTCGAC CGGCGGTCTACCCTGCCCCT
Downstream 100 bases:
>100_bases ACCGGGGAAACCGGAACTGTTGACCCGAAGTTTCGGCCCCGGAGTGGCAACTTCCCCGGTGAACCGGGGAAACCGACCCC GGACTCACCGACGACAGGTG
Product: HAD family hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MTPAHDRRARPRNLQLRSVLAGEAAAAAAEVESALTPPLDPVAAAFFDVDNTVMQGASIFHLARGLHRRKFFTTREILGA AWKQAYFRVVGVEDPAHVADARASALGFIAGHTVTELQDLGEEIFEEAMADRIWPGTRALAQLHLDEGQRVWLVTAAPIE IAQIIARRLGLTGALGTVAEHIDGVYTGRLVGDLLHGPAKGEAVRALAAREGLDLHRCSAYSDSFNDLPMLTMVGDPCAI NPDARLRAHAREQGWRIHDYRTGRKALRAGLVAGGIAGAASGTVAAGLALRGRRFPR
Sequences:
>Translated_297_residues MTPAHDRRARPRNLQLRSVLAGEAAAAAAEVESALTPPLDPVAAAFFDVDNTVMQGASIFHLARGLHRRKFFTTREILGA AWKQAYFRVVGVEDPAHVADARASALGFIAGHTVTELQDLGEEIFEEAMADRIWPGTRALAQLHLDEGQRVWLVTAAPIE IAQIIARRLGLTGALGTVAEHIDGVYTGRLVGDLLHGPAKGEAVRALAAREGLDLHRCSAYSDSFNDLPMLTMVGDPCAI NPDARLRAHAREQGWRIHDYRTGRKALRAGLVAGGIAGAASGTVAAGLALRGRRFPR >Mature_296_residues TPAHDRRARPRNLQLRSVLAGEAAAAAAEVESALTPPLDPVAAAFFDVDNTVMQGASIFHLARGLHRRKFFTTREILGAA WKQAYFRVVGVEDPAHVADARASALGFIAGHTVTELQDLGEEIFEEAMADRIWPGTRALAQLHLDEGQRVWLVTAAPIEI AQIIARRLGLTGALGTVAEHIDGVYTGRLVGDLLHGPAKGEAVRALAAREGLDLHRCSAYSDSFNDLPMLTMVGDPCAIN PDARLRAHAREQGWRIHDYRTGRKALRAGLVAGGIAGAASGTVAAGLALRGRRFPR
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006383 - InterPro: IPR006385 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 31877; Mature: 31746
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPAHDRRARPRNLQLRSVLAGEAAAAAAEVESALTPPLDPVAAAFFDVDNTVMQGASIF CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHH HLARGLHRRKFFTTREILGAAWKQAYFRVVGVEDPAHVADARASALGFIAGHTVTELQDL HHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHH GEEIFEEAMADRIWPGTRALAQLHLDEGQRVWLVTAAPIEIAQIIARRLGLTGALGTVAE HHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHCCCHHHHHHHH HIDGVYTGRLVGDLLHGPAKGEAVRALAAREGLDLHRCSAYSDSFNDLPMLTMVGDPCAI HHCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHCCCCCCCCCEEEEEECCCCCC NPDARLRAHAREQGWRIHDYRTGRKALRAGLVAGGIAGAASGTVAAGLALRGRRFPR CCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCC >Mature Secondary Structure TPAHDRRARPRNLQLRSVLAGEAAAAAAEVESALTPPLDPVAAAFFDVDNTVMQGASIF CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHH HLARGLHRRKFFTTREILGAAWKQAYFRVVGVEDPAHVADARASALGFIAGHTVTELQDL HHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHH GEEIFEEAMADRIWPGTRALAQLHLDEGQRVWLVTAAPIEIAQIIARRLGLTGALGTVAE HHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHCCCHHHHHHHH HIDGVYTGRLVGDLLHGPAKGEAVRALAAREGLDLHRCSAYSDSFNDLPMLTMVGDPCAI HHCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHCCCCCCCCCEEEEEECCCCCC NPDARLRAHAREQGWRIHDYRTGRKALRAGLVAGGIAGAASGTVAAGLALRGRRFPR CCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]