| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is folE [H]
Identifier: 119714709
GI number: 119714709
Start: 477305
End: 477922
Strand: Direct
Name: folE [H]
Synonym: Noca_0445
Alternate gene names: 119714709
Gene position: 477305-477922 (Clockwise)
Preceding gene: 119714708
Following gene: 119714710
Centisome position: 9.57
GC content: 71.36
Gene sequence:
>618_bases ATGGTCGTCGCCATGAGCGACTCGACGCTGCCGGGCGGACGTCCCGCGCCCGCCTTCGACCTGGCGCGCGCCGAGGCGGC CGTCCGGGAGCTGCTCATCGCGATCGGTGAGGACCCCGAGCGGGAGGGCCTGCAGGAGACCCCGGCCCGGGTGGCGCGGG CGTACGCCGAGCTCACGGCCGGGCTGCGGATGGAGCCCGAGGACGTGCTCACCACGACCTTCGACATCGGGCACGACGAG ATGGTGCTGGTGCGCGACATCGAGCTGTGGTCGATGTGCGAGCACCACCTGGTGCCGTTCACCGGTGTCGCGCACGTCGG CTACATCCCCGCGACCAGCGGGAAGATCACCGGACTGTCCAAGCTCGCCCGGCTCGTCGACGTCTACGCGAAGCGCCCCC AGGTCCAGGAGCGGCTCACCACCCAGGTCGCCGACGCCCTGACCCGCCTCCTCGAAGCGCGCGGCGTGATCGTGGTGATC GAGGCCGAGCACCTGTGCATGACCATGCGGGGGGTCAAGAAGGCGGGTGCTCGCACCATCACCTCCGCAGTGCGCGGCAC GATGCGGACCAACCCCACGACCCGGGCCGAGGCGATGGCCCTGATCCACCGGCGATGA
Upstream 100 bases:
>100_bases CGCGCCGGGGCTCGGGTCTCGACACGGCGGTCGCGACCTCGTGCCTCGGTCGCGCGCCTCGCTCGACCACCAACGACGGG CCCGCTGACGCGTCCCCGCT
Downstream 100 bases:
>100_bases GCCGCTGATGGCCGCCCTCGCAGACCTGCTCGCCCCCCGCGCACGGCCGCGGCTGATGGGCGTCGTGAACGTGACCCCGG ACTCGTTCTCGGACGGCGGC
Product: GTP cyclohydrolase I
Products: NA
Alternate protein names: GTP cyclohydrolase I; GTP-CH-I [H]
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MVVAMSDSTLPGGRPAPAFDLARAEAAVRELLIAIGEDPEREGLQETPARVARAYAELTAGLRMEPEDVLTTTFDIGHDE MVLVRDIELWSMCEHHLVPFTGVAHVGYIPATSGKITGLSKLARLVDVYAKRPQVQERLTTQVADALTRLLEARGVIVVI EAEHLCMTMRGVKKAGARTITSAVRGTMRTNPTTRAEAMALIHRR
Sequences:
>Translated_205_residues MVVAMSDSTLPGGRPAPAFDLARAEAAVRELLIAIGEDPEREGLQETPARVARAYAELTAGLRMEPEDVLTTTFDIGHDE MVLVRDIELWSMCEHHLVPFTGVAHVGYIPATSGKITGLSKLARLVDVYAKRPQVQERLTTQVADALTRLLEARGVIVVI EAEHLCMTMRGVKKAGARTITSAVRGTMRTNPTTRAEAMALIHRR >Mature_205_residues MVVAMSDSTLPGGRPAPAFDLARAEAAVRELLIAIGEDPEREGLQETPARVARAYAELTAGLRMEPEDVLTTTFDIGHDE MVLVRDIELWSMCEHHLVPFTGVAHVGYIPATSGKITGLSKLARLVDVYAKRPQVQERLTTQVADALTRLLEARGVIVVI EAEHLCMTMRGVKKAGARTITSAVRGTMRTNPTTRAEAMALIHRR
Specific function: Tetrahydrofolate biosynthesis; first step. [C]
COG id: COG0302
COG function: function code H; GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family [H]
Homologues:
Organism=Homo sapiens, GI66932968, Length=185, Percent_Identity=49.7297297297297, Blast_Score=187, Evalue=6e-48, Organism=Homo sapiens, GI4503949, Length=185, Percent_Identity=49.7297297297297, Blast_Score=187, Evalue=6e-48, Organism=Homo sapiens, GI66932970, Length=155, Percent_Identity=47.741935483871, Blast_Score=145, Evalue=2e-35, Organism=Homo sapiens, GI66932972, Length=145, Percent_Identity=50.3448275862069, Blast_Score=144, Evalue=5e-35, Organism=Escherichia coli, GI1788476, Length=172, Percent_Identity=41.2790697674419, Blast_Score=114, Evalue=4e-27, Organism=Caenorhabditis elegans, GI17560486, Length=180, Percent_Identity=49.4444444444444, Blast_Score=187, Evalue=2e-48, Organism=Saccharomyces cerevisiae, GI6321706, Length=187, Percent_Identity=49.1978609625668, Blast_Score=181, Evalue=6e-47, Organism=Drosophila melanogaster, GI24656782, Length=196, Percent_Identity=48.9795918367347, Blast_Score=179, Evalue=1e-45, Organism=Drosophila melanogaster, GI24656796, Length=196, Percent_Identity=48.9795918367347, Blast_Score=178, Evalue=2e-45, Organism=Drosophila melanogaster, GI24656791, Length=196, Percent_Identity=48.9795918367347, Blast_Score=177, Evalue=4e-45,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001474 - InterPro: IPR020602 - InterPro: IPR018234 [H]
Pfam domain/function: PF01227 GTP_cyclohydroI [H]
EC number: =3.5.4.16 [H]
Molecular weight: Translated: 22378; Mature: 22378
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: PS00859 GTP_CYCLOHYDROL_1_1 ; PS00860 GTP_CYCLOHYDROL_1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVAMSDSTLPGGRPAPAFDLARAEAAVRELLIAIGEDPEREGLQETPARVARAYAELTA CEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH GLRMEPEDVLTTTFDIGHDEMVLVRDIELWSMCEHHLVPFTGVAHVGYIPATSGKITGLS CCCCCHHHHHEEEEECCCCCEEEEECCHHHHHHHHCCCCCCCHHHCCCCCCCCCCCHHHH KLARLVDVYAKRPQVQERLTTQVADALTRLLEARGVIVVIEAEHLCMTMRGVKKAGARTI HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHH TSAVRGTMRTNPTTRAEAMALIHRR HHHHHHHHCCCCCHHHHHHHHHHCC >Mature Secondary Structure MVVAMSDSTLPGGRPAPAFDLARAEAAVRELLIAIGEDPEREGLQETPARVARAYAELTA CEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH GLRMEPEDVLTTTFDIGHDEMVLVRDIELWSMCEHHLVPFTGVAHVGYIPATSGKITGLS CCCCCHHHHHEEEEECCCCCEEEEECCHHHHHHHHCCCCCCCHHHCCCCCCCCCCCHHHH KLARLVDVYAKRPQVQERLTTQVADALTRLLEARGVIVVIEAEHLCMTMRGVKKAGARTI HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHH TSAVRGTMRTNPTTRAEAMALIHRR HHHHHHHHCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11572948; 12692562 [H]