| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is est [H]
Identifier: 119714694
GI number: 119714694
Start: 459674
End: 460591
Strand: Reverse
Name: est [H]
Synonym: Noca_0430
Alternate gene names: 119714694
Gene position: 460591-459674 (Counterclockwise)
Preceding gene: 119714702
Following gene: 119714693
Centisome position: 9.24
GC content: 75.05
Gene sequence:
>918_bases ATGAGCCCCAGCCGCCGCCACGAGGCGCTCGCGTGGGTCGTCCCGAGGCTGCGTCGCTCGCGCGACCTGGGCACCCCGGA GGCGGAGCGGGCCCGGATCGAGCGCTGGCACGCGCGGCTCGCACGGCGGCTGCCGACCCGCGTGACGCCGGGATTCGCGA AGCGGTTCTCCGTGGTCACCGAGGTGCTCACCGGCCGGTCCGGCGAGTTCGCGTCGTACGTCGTCACCCCGCGCGGGACC GATCCGCGACGCACCGTGGTCTACCTCCACGGCGGCGGCTACGTGGCCCCGATCGACCCCTTCCACGTCCGCTACCTGTG CCGCCTGGCCACCGACCTCCACGCCCGGATCGTGCTGCCGGACTACCCCCTGGCGCCCGAGCACACCTGGCGGGACTCGC ACGCGGCCATCGCCGACCTCACCGGCCGGTGGGTCGGCGACTCCGACCAGCTGGTGCTCGCCGGCGACTCCGCGGGCGGC GGCTACGCGCTCGCGATCGCCCAGACGCTGCGCGACCGCGGCGGCCCGCAGCCGGCGCGGCTGCTGCTGCACTCCCCGTG GGTGGACCTGACCACCGCGACGCCGGAGACCGAGTCGTTCACGGTCCGCGACCCCTGGCTGTTCCTCGGCAAGCTGCAGG CGTACGCCGCCTGGTGGGCCGGATCCACCGAGGACCTGGGCCGTCCCGAGGTGAGCCCCGCGCTGGCCGAGCTCGGCGGG CTGCCGCCGGCGCTGATGTTCTGCGGCACCCGCGACACGCTCACACCCGGCTGCCGGCTGCTGGCCCGCCGGGCCGAGCA GGCCGACTGGGACCTCACCTACGTCGAGGTCCACGACCTGATCCACGTCTACCCGCTGCTGCCGTTCATCCCGGAGGCCC GGGAGGCCCGCCGACGCACGATGGAGTTCCTCCGATGA
Upstream 100 bases:
>100_bases GCATCTGCTCTCTCCTTCGTGGACTCGTCTCGGTCCGTCACCCACCAGACACCGGCCACCGCGCCGCTGTGACAACCCCC GCTGTGGGAGGCTGCGAGCC
Downstream 100 bases:
>100_bases TCACGATCACCGCCGGCCCGTTCACCGCCCTGGACGCCCCGACGGCGTACGCCGTCTGGCGGCTGCGCCAGGACGTGTTC GTCGTCGAGCAGGAGTGTCC
Product: alpha/beta hydrolase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MSPSRRHEALAWVVPRLRRSRDLGTPEAERARIERWHARLARRLPTRVTPGFAKRFSVVTEVLTGRSGEFASYVVTPRGT DPRRTVVYLHGGGYVAPIDPFHVRYLCRLATDLHARIVLPDYPLAPEHTWRDSHAAIADLTGRWVGDSDQLVLAGDSAGG GYALAIAQTLRDRGGPQPARLLLHSPWVDLTTATPETESFTVRDPWLFLGKLQAYAAWWAGSTEDLGRPEVSPALAELGG LPPALMFCGTRDTLTPGCRLLARRAEQADWDLTYVEVHDLIHVYPLLPFIPEAREARRRTMEFLR
Sequences:
>Translated_305_residues MSPSRRHEALAWVVPRLRRSRDLGTPEAERARIERWHARLARRLPTRVTPGFAKRFSVVTEVLTGRSGEFASYVVTPRGT DPRRTVVYLHGGGYVAPIDPFHVRYLCRLATDLHARIVLPDYPLAPEHTWRDSHAAIADLTGRWVGDSDQLVLAGDSAGG GYALAIAQTLRDRGGPQPARLLLHSPWVDLTTATPETESFTVRDPWLFLGKLQAYAAWWAGSTEDLGRPEVSPALAELGG LPPALMFCGTRDTLTPGCRLLARRAEQADWDLTYVEVHDLIHVYPLLPFIPEAREARRRTMEFLR >Mature_304_residues SPSRRHEALAWVVPRLRRSRDLGTPEAERARIERWHARLARRLPTRVTPGFAKRFSVVTEVLTGRSGEFASYVVTPRGTD PRRTVVYLHGGGYVAPIDPFHVRYLCRLATDLHARIVLPDYPLAPEHTWRDSHAAIADLTGRWVGDSDQLVLAGDSAGGG YALAIAQTLRDRGGPQPARLLLHSPWVDLTTATPETESFTVRDPWLFLGKLQAYAAWWAGSTEDLGRPEVSPALAELGGL PPALMFCGTRDTLTPGCRLLARRAEQADWDLTYVEVHDLIHVYPLLPFIPEAREARRRTMEFLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted (Potential). Note=External to the cytoplasmic membrane [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 'GDXG' lipolytic enzyme family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013094 - InterPro: IPR002168 [H]
Pfam domain/function: PF07859 Abhydrolase_3 [H]
EC number: NA
Molecular weight: Translated: 34179; Mature: 34048
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPSRRHEALAWVVPRLRRSRDLGTPEAERARIERWHARLARRLPTRVTPGFAKRFSVVT CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH EVLTGRSGEFASYVVTPRGTDPRRTVVYLHGGGYVAPIDPFHVRYLCRLATDLHARIVLP HHHHCCCCCCEEEEEECCCCCCCEEEEEEECCCEECCCCHHHHHHHHHHHHCCCEEEEEC DYPLAPEHTWRDSHAAIADLTGRWVGDSDQLVLAGDSAGGGYALAIAQTLRDRGGPQPAR CCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCHHH LLLHSPWVDLTTATPETESFTVRDPWLFLGKLQAYAAWWAGSTEDLGRPEVSPALAELGG HEEECCCCEEEECCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCC LPPALMFCGTRDTLTPGCRLLARRAEQADWDLTYVEVHDLIHVYPLLPFIPEAREARRRT CCHHHEEECCCCCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCCCHHHHHHHH MEFLR HHHHC >Mature Secondary Structure SPSRRHEALAWVVPRLRRSRDLGTPEAERARIERWHARLARRLPTRVTPGFAKRFSVVT CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH EVLTGRSGEFASYVVTPRGTDPRRTVVYLHGGGYVAPIDPFHVRYLCRLATDLHARIVLP HHHHCCCCCCEEEEEECCCCCCCEEEEEEECCCEECCCCHHHHHHHHHHHHCCCEEEEEC DYPLAPEHTWRDSHAAIADLTGRWVGDSDQLVLAGDSAGGGYALAIAQTLRDRGGPQPAR CCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCHHH LLLHSPWVDLTTATPETESFTVRDPWLFLGKLQAYAAWWAGSTEDLGRPEVSPALAELGG HEEECCCCEEEECCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCC LPPALMFCGTRDTLTPGCRLLARRAEQADWDLTYVEVHDLIHVYPLLPFIPEAREARRRT CCHHHEEECCCCCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCCCHHHHHHHH MEFLR HHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2545531 [H]