| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714675
Identifier: 119714675
GI number: 119714675
Start: 443037
End: 443549
Strand: Reverse
Name: 119714675
Synonym: Noca_0410
Alternate gene names: NA
Gene position: 443549-443037 (Counterclockwise)
Preceding gene: 119714676
Following gene: 119714674
Centisome position: 8.9
GC content: 78.36
Gene sequence:
>513_bases GTGAAGACCCCGCCGCCGCCGGCCGCCCTCGCCACGGCCGCCGCCCTCGCCCAGCGGCTGCTGGGTGGCCCGCGTCCGGC TCGCCCGGCACGCACCGCGGCGGCCGGCCTGGTGGGAGCCGCTTCGGCCGGCCTGCTCGTCGCGGCGGTCGAGCAGTTCC GGCGGACCGGGACGACCGTCAACCCGCTCGAGCCCGGCACCGCGACGGACCTGGTCACCACCGGCGCCAACGCGGTCTCG CGCAACCCGATGTACGTCGGGATGGCCGGGGTCCTGGTCGCCCACGCCCTCCTGCGCGGGCGGTGGGCGGCACTCCTGCC GGCCGCGGCGTTCGTGGTCGCGATCGACCGCGGCCAGATCGCCGCCGAGGAGGCCGCGTTGCGCGAGCGGTTCCCCGGGG ACTACTCGACCTACGCCGCGCGGGTGCCTCGCTGGGTAGGGCTCCCCGGGTCCCGGCGGACGTCGGACGCCGGACCGCAC CGGCGGGGGTGCCGGGCTACCGTCGACTCATGA
Upstream 100 bases:
>100_bases GACCTCGTGCTGGTCGTCGCCTGGATCCTGGTGCTGGTGCTGGCCGTCGTGCTGAAGTACGGCGACGCCCTGTTCGCCTG ATCCTCGTGAGGTCCGCATC
Downstream 100 bases:
>100_bases CGGAACGGCTCGTGGCGTTCGTGACCGGCGCGTCCAGCGGCCTCGGGAGGGCGACCGCCCGTGCCCTGGCCCGCGCCGGG TACGACGTGGCCCTGGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MKTPPPPAALATAAALAQRLLGGPRPARPARTAAAGLVGAASAGLLVAAVEQFRRTGTTVNPLEPGTATDLVTTGANAVS RNPMYVGMAGVLVAHALLRGRWAALLPAAAFVVAIDRGQIAAEEAALRERFPGDYSTYAARVPRWVGLPGSRRTSDAGPH RRGCRATVDS
Sequences:
>Translated_170_residues MKTPPPPAALATAAALAQRLLGGPRPARPARTAAAGLVGAASAGLLVAAVEQFRRTGTTVNPLEPGTATDLVTTGANAVS RNPMYVGMAGVLVAHALLRGRWAALLPAAAFVVAIDRGQIAAEEAALRERFPGDYSTYAARVPRWVGLPGSRRTSDAGPH RRGCRATVDS >Mature_170_residues MKTPPPPAALATAAALAQRLLGGPRPARPARTAAAGLVGAASAGLLVAAVEQFRRTGTTVNPLEPGTATDLVTTGANAVS RNPMYVGMAGVLVAHALLRGRWAALLPAAAFVVAIDRGQIAAEEAALRERFPGDYSTYAARVPRWVGLPGSRRTSDAGPH RRGCRATVDS
Specific function: Unknown
COG id: COG2020
COG function: function code O; Putative protein-S-isoprenylcysteine methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17454; Mature: 17454
Theoretical pI: Translated: 11.94; Mature: 11.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTPPPPAALATAAALAQRLLGGPRPARPARTAAAGLVGAASAGLLVAAVEQFRRTGTTV CCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC NPLEPGTATDLVTTGANAVSRNPMYVGMAGVLVAHALLRGRWAALLPAAAFVVAIDRGQI CCCCCCCCHHHHHCCCCHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCH AAEEAALRERFPGDYSTYAARVPRWVGLPGSRRTSDAGPHRRGCRATVDS HHHHHHHHHHCCCCHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKTPPPPAALATAAALAQRLLGGPRPARPARTAAAGLVGAASAGLLVAAVEQFRRTGTTV CCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC NPLEPGTATDLVTTGANAVSRNPMYVGMAGVLVAHALLRGRWAALLPAAAFVVAIDRGQI CCCCCCCCHHHHHCCCCHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCH AAEEAALRERFPGDYSTYAARVPRWVGLPGSRRTSDAGPHRRGCRATVDS HHHHHHHHHHCCCCHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA