| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714627
Identifier: 119714627
GI number: 119714627
Start: 387475
End: 388344
Strand: Reverse
Name: 119714627
Synonym: Noca_0362
Alternate gene names: NA
Gene position: 388344-387475 (Counterclockwise)
Preceding gene: 119714634
Following gene: 119714626
Centisome position: 7.79
GC content: 71.26
Gene sequence:
>870_bases TTGTGGACAAGGCGGTTCGACACGGTGCCTGTGGACGGCGAGTGGACTGCGCCCGCCTACGATGGCGCCATGGCGACCCG GTCCACCGCGGCCTTCTTCGATCTCGACAAGACGATCATCGCCAAGTCGAGCACGTTGGCGTTCAGCAAGCCGTTCCAAG CGGGCGGGCTGATCTCGCGGCGCGCCGTGCTGCGCTCGGCGTACGCCCAGTTCGTCTACCTGGTCGGCGGCGCGGACCAC GACCAGATGGAGAAGATGCGGCAGTTCATGTCGCAGCTGTGCGCCGGGTGGGACGTCGCGACCGTCCGGGAGATCGTCGC GGACACCCTGCACAACATCGTCGACCCGCTGGTGTACGACGAGGCGGTCAGCCTGATCGAGGAGCACCGCCTGGCCGGGC GCGACGTGGTCGTCGTCTCGGCCTCCGGTGCCGAGGTGGTCGAGCCGATCGCCGCGATGCTCGGCGCGGACCGGGTGATC GCGACCCGGATGGAGATCGCGGAGGGCCGCTACACCGGGGGCATCGAGTACTACGCGTACGCGGACGAGAAGGCCCGCGC CATCGAGGACCTGGCCGCCGCGGAGGGCTACGACCTCGCGAGCAGCTACGGCTACAGCGACTCGGTGACGGACGTGCCGA TGCTCGAGGCGGTGGGCCACGCCCACGCAGTCAACCCGGACAAGGAGCTGCGCCGGATCGCGGCCGAGCGCGGCTGGCCG GTGCTGGTGTTCACCAAGCCGGTGGCGCTGCGCACCCGGGTCCCGCTGCCGCCGGCGAAGCCCACCCTGGCCGCCCTCGC GGTGGGCGGCGTGGTGGCCGTCGGCGGGGTGCTGTGGGCCAACTCGCGCAAGCGACGGCCCAGCGCCTGA
Upstream 100 bases:
>100_bases AGCTCGTCGAGCAGGGACTGGTCACGGGTGATCAACAGCGGAGCGGTCATGGGCCGATGGTTCCCGCGGCGGCGGACGAC GGCACCCGGGCCGGAAGCCC
Downstream 100 bases:
>100_bases CCCCCCGATCCCACCGCTCGGCGTGTCGCCGGCCGGCCCTGATCGCGCCACGGAAGTCAACCCTCGAAGGTCCTTGAACG TGCGCCGGATGAGGCGTAGA
Product: HAD family hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MWTRRFDTVPVDGEWTAPAYDGAMATRSTAAFFDLDKTIIAKSSTLAFSKPFQAGGLISRRAVLRSAYAQFVYLVGGADH DQMEKMRQFMSQLCAGWDVATVREIVADTLHNIVDPLVYDEAVSLIEEHRLAGRDVVVVSASGAEVVEPIAAMLGADRVI ATRMEIAEGRYTGGIEYYAYADEKARAIEDLAAAEGYDLASSYGYSDSVTDVPMLEAVGHAHAVNPDKELRRIAAERGWP VLVFTKPVALRTRVPLPPAKPTLAALAVGGVVAVGGVLWANSRKRRPSA
Sequences:
>Translated_289_residues MWTRRFDTVPVDGEWTAPAYDGAMATRSTAAFFDLDKTIIAKSSTLAFSKPFQAGGLISRRAVLRSAYAQFVYLVGGADH DQMEKMRQFMSQLCAGWDVATVREIVADTLHNIVDPLVYDEAVSLIEEHRLAGRDVVVVSASGAEVVEPIAAMLGADRVI ATRMEIAEGRYTGGIEYYAYADEKARAIEDLAAAEGYDLASSYGYSDSVTDVPMLEAVGHAHAVNPDKELRRIAAERGWP VLVFTKPVALRTRVPLPPAKPTLAALAVGGVVAVGGVLWANSRKRRPSA >Mature_289_residues MWTRRFDTVPVDGEWTAPAYDGAMATRSTAAFFDLDKTIIAKSSTLAFSKPFQAGGLISRRAVLRSAYAQFVYLVGGADH DQMEKMRQFMSQLCAGWDVATVREIVADTLHNIVDPLVYDEAVSLIEEHRLAGRDVVVVSASGAEVVEPIAAMLGADRVI ATRMEIAEGRYTGGIEYYAYADEKARAIEDLAAAEGYDLASSYGYSDSVTDVPMLEAVGHAHAVNPDKELRRIAAERGWP VLVFTKPVALRTRVPLPPAKPTLAALAVGGVVAVGGVLWANSRKRRPSA
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006383 - InterPro: IPR006385 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31259; Mature: 31259
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWTRRFDTVPVDGEWTAPAYDGAMATRSTAAFFDLDKTIIAKSSTLAFSKPFQAGGLISR CCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHCCCHHHHCCCCCCEECCCCCCCCHHHH RAVLRSAYAQFVYLVGGADHDQMEKMRQFMSQLCAGWDVATVREIVADTLHNIVDPLVYD HHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH EAVSLIEEHRLAGRDVVVVSASGAEVVEPIAAMLGADRVIATRMEIAEGRYTGGIEYYAY HHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEE ADEKARAIEDLAAAEGYDLASSYGYSDSVTDVPMLEAVGHAHAVNPDKELRRIAAERGWP CCHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCE VLVFTKPVALRTRVPLPPAKPTLAALAVGGVVAVGGVLWANSRKRRPSA EEEEECCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MWTRRFDTVPVDGEWTAPAYDGAMATRSTAAFFDLDKTIIAKSSTLAFSKPFQAGGLISR CCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHCCCHHHHCCCCCCEECCCCCCCCHHHH RAVLRSAYAQFVYLVGGADHDQMEKMRQFMSQLCAGWDVATVREIVADTLHNIVDPLVYD HHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH EAVSLIEEHRLAGRDVVVVSASGAEVVEPIAAMLGADRVIATRMEIAEGRYTGGIEYYAY HHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEE ADEKARAIEDLAAAEGYDLASSYGYSDSVTDVPMLEAVGHAHAVNPDKELRRIAAERGWP CCHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCE VLVFTKPVALRTRVPLPPAKPTLAALAVGGVVAVGGVLWANSRKRRPSA EEEEECCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA