| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714610
Identifier: 119714610
GI number: 119714610
Start: 365473
End: 365892
Strand: Reverse
Name: 119714610
Synonym: Noca_0344
Alternate gene names: NA
Gene position: 365892-365473 (Counterclockwise)
Preceding gene: 119714611
Following gene: 119714605
Centisome position: 7.34
GC content: 66.43
Gene sequence:
>420_bases ATGGCGAGCAACCAGGTCCAGGCTGCACCTCCGGATGAGGGCGATCCGACCATCGGTCGTCTGGTCCACGACGCCAGCCG GGACATCTCCACGCTGATCCAGAAGGAGATCCAGCTGGCCAAGTCCGAGCTGAAGGTCAGCGTGCAGGCCGGCGGCATCG GGATCGGCCTCTTCGCGGCTGCCGGCTTCATCGCGGTCCTCGCGGTCATCATGCTGTCGGTCGCCATCGCGTACTTCATC AACTGGAACGGCGACGGCCTCGCCCTGCACTGGGCGTTCCTCATCGTCTTCGGCTTCTACCTGCTGCTCGCGGGCCTGAT GGTGTTCGTCGGCATCCGCAAGGTCAAGCAGGTCCGCGCCCCGGAGCGGGCGATCGAGCAGGGCCGCGAGATCCCCAAGG CGCTCAAGGGTCGCAGCTGA
Upstream 100 bases:
>100_bases GCTGGTCGAGATCGAGGAGCAGGACGCCGACGCGGACGGGGTCCCCGACGTCTACCAGCGCGACGCCGACGAGGGGTGAG GGTTCTGTAGGGTGAGCGAC
Downstream 100 bases:
>100_bases GCGGATGCCGCGGCGCGGCGCGGCGGGCCAGTTTCATCGGCCGACCGATGAAACTCGACGCTGGACGATGAAGCTTCATC GTCCAGCCACGAGCTCTGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 139; Mature: 138
Protein sequence:
>139_residues MASNQVQAAPPDEGDPTIGRLVHDASRDISTLIQKEIQLAKSELKVSVQAGGIGIGLFAAAGFIAVLAVIMLSVAIAYFI NWNGDGLALHWAFLIVFGFYLLLAGLMVFVGIRKVKQVRAPERAIEQGREIPKALKGRS
Sequences:
>Translated_139_residues MASNQVQAAPPDEGDPTIGRLVHDASRDISTLIQKEIQLAKSELKVSVQAGGIGIGLFAAAGFIAVLAVIMLSVAIAYFI NWNGDGLALHWAFLIVFGFYLLLAGLMVFVGIRKVKQVRAPERAIEQGREIPKALKGRS >Mature_138_residues ASNQVQAAPPDEGDPTIGRLVHDASRDISTLIQKEIQLAKSELKVSVQAGGIGIGLFAAAGFIAVLAVIMLSVAIAYFIN WNGDGLALHWAFLIVFGFYLLLAGLMVFVGIRKVKQVRAPERAIEQGREIPKALKGRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14913; Mature: 14782
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASNQVQAAPPDEGDPTIGRLVHDASRDISTLIQKEIQLAKSELKVSVQAGGIGIGLFAA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH AGFIAVLAVIMLSVAIAYFINWNGDGLALHWAFLIVFGFYLLLAGLMVFVGIRKVKQVRA HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PERAIEQGREIPKALKGRS HHHHHHHHHHHHHHHCCCC >Mature Secondary Structure ASNQVQAAPPDEGDPTIGRLVHDASRDISTLIQKEIQLAKSELKVSVQAGGIGIGLFAA CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH AGFIAVLAVIMLSVAIAYFINWNGDGLALHWAFLIVFGFYLLLAGLMVFVGIRKVKQVRA HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PERAIEQGREIPKALKGRS HHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA