| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714595
Identifier: 119714595
GI number: 119714595
Start: 353090
End: 354118
Strand: Reverse
Name: 119714595
Synonym: Noca_0329
Alternate gene names: NA
Gene position: 354118-353090 (Counterclockwise)
Preceding gene: 119714598
Following gene: 119714594
Centisome position: 7.1
GC content: 72.01
Gene sequence:
>1029_bases ATGGCTCCGCCGACGACCACGCCGACGACCACCCCCGACTGGTCGCGCGTACGGCTGCACGTGGTGACCGGCAAGGGCGG CACCGGCAAGTCGACGGTCGCCGCAGCACTCGCACTGGGCCTGGCCTCCCAGGGCCAGCAGGTGCTGCTGTGCGAGGTCG AGGGGCGGCAGGGGATCGCCCGGATGTTCGACGTCGACCCGCTGCCCTACGAGGAGCGTCGGATCGCGACCGGGCTGCAC CACGACGGCCGACCACCCGGCGTCGTGCACGCGCTGCACATCGACGCGGAGTCCGCGCTGCTGGAGTACCTCGCGATGTA CTACAAGCTCGGCCGCGCGGGTCGCGCACTCGACCGCTTCGGCGTCATCGAGTTCGCGACCACGATCGCTCCGGGCGTCC GCGACGTACTGCTCACCGGGAAGGTCTTCGAGGCGGTGCAGCGCAACAGCCGCAACCGCAACGCCACCCGGTACGACGCC GTCGTGCTGGACGCCCCGCCGACCGGGCGGATCACCCAGTTCCTCAACGTGAACGAGGAGCTGGCCGGGCTTGCCAAGGT CGGGCCGATCAAGGGCCAGGCCGACACCGTGATGACGTTGTTCCGGTCACCACGGACGCTGGTTCATCTCGTCACGGTCC TCGAGGAGATGCCTGTGCAGGAGACCGCCGACGGGATCTCCGAGCTGCGTGCCGCCCGGTTGCCGGTCGGCGCGGTCATC GTCAACCAGGTGCGGCCCCGGGACATCACGCCCGCGGACCTCGAGGCCGCCGTCGCCGGCCGCCTCGACACCGCGCGGAT CGAGGCCGACCTGGACCAGGCCGGCGTGACCGGGGGGACCGCGCTGGTGGAGGGGCTGATCGCCGAGGTCCGCGACCACG CCGAGCGGCGGGCCCTGGAGGACGCGCAGCGCGCGGTCGTCGACTCCTTCGGGTTGCCGACGTACGAGCTGCCGCGGCTG ACCAGCGGCGTCGACCTCGGCGGCCTGTACGAGCTGGCCGCCGACCTGAAGAACCAGGGGCTGGCGTGA
Upstream 100 bases:
>100_bases CCACCACCTTGTCCACGCCAACTCCTCCTCCCCCGGGACCAGCTGTGACCCGGGTCTCGTCGATCCTAGGGCCCCCTGCG TCTCATCTAGGCTCAGCCCC
Downstream 100 bases:
>100_bases GCACCGCCCGCAAGACCCGCACCCGCACCCGGGTCGGCCCGCTCGCGACCGCCCCGACCGCGGCGCCCGCCCTCGACGTC GACGCCCTTCTCGACGACCG
Product: anion-transporting ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MAPPTTTPTTTPDWSRVRLHVVTGKGGTGKSTVAAALALGLASQGQQVLLCEVEGRQGIARMFDVDPLPYEERRIATGLH HDGRPPGVVHALHIDAESALLEYLAMYYKLGRAGRALDRFGVIEFATTIAPGVRDVLLTGKVFEAVQRNSRNRNATRYDA VVLDAPPTGRITQFLNVNEELAGLAKVGPIKGQADTVMTLFRSPRTLVHLVTVLEEMPVQETADGISELRAARLPVGAVI VNQVRPRDITPADLEAAVAGRLDTARIEADLDQAGVTGGTALVEGLIAEVRDHAERRALEDAQRAVVDSFGLPTYELPRL TSGVDLGGLYELAADLKNQGLA
Sequences:
>Translated_342_residues MAPPTTTPTTTPDWSRVRLHVVTGKGGTGKSTVAAALALGLASQGQQVLLCEVEGRQGIARMFDVDPLPYEERRIATGLH HDGRPPGVVHALHIDAESALLEYLAMYYKLGRAGRALDRFGVIEFATTIAPGVRDVLLTGKVFEAVQRNSRNRNATRYDA VVLDAPPTGRITQFLNVNEELAGLAKVGPIKGQADTVMTLFRSPRTLVHLVTVLEEMPVQETADGISELRAARLPVGAVI VNQVRPRDITPADLEAAVAGRLDTARIEADLDQAGVTGGTALVEGLIAEVRDHAERRALEDAQRAVVDSFGLPTYELPRL TSGVDLGGLYELAADLKNQGLA >Mature_341_residues APPTTTPTTTPDWSRVRLHVVTGKGGTGKSTVAAALALGLASQGQQVLLCEVEGRQGIARMFDVDPLPYEERRIATGLHH DGRPPGVVHALHIDAESALLEYLAMYYKLGRAGRALDRFGVIEFATTIAPGVRDVLLTGKVFEAVQRNSRNRNATRYDAV VLDAPPTGRITQFLNVNEELAGLAKVGPIKGQADTVMTLFRSPRTLVHLVTVLEEMPVQETADGISELRAARLPVGAVIV NQVRPRDITPADLEAAVAGRLDTARIEADLDQAGVTGGTALVEGLIAEVRDHAERRALEDAQRAVVDSFGLPTYELPRLT SGVDLGGLYELAADLKNQGLA
Specific function: Unknown
COG id: COG0003
COG function: function code P; Oxyanion-translocating ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36612; Mature: 36481
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPPTTTPTTTPDWSRVRLHVVTGKGGTGKSTVAAALALGLASQGQQVLLCEVEGRQGIA CCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHH RMFDVDPLPYEERRIATGLHHDGRPPGVVHALHIDAESALLEYLAMYYKLGRAGRALDRF HHHCCCCCCCHHHHHHHCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHCCHHHHHH GVIEFATTIAPGVRDVLLTGKVFEAVQRNSRNRNATRYDAVVLDAPPTGRITQFLNVNEE HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHHHCCCHH LAGLAKVGPIKGQADTVMTLFRSPRTLVHLVTVLEEMPVQETADGISELRAARLPVGAVI HHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHH VNQVRPRDITPADLEAAVAGRLDTARIEADLDQAGVTGGTALVEGLIAEVRDHAERRALE HCCCCCCCCCCHHHHHHHHCCCCHHHHHHCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH DAQRAVVDSFGLPTYELPRLTSGVDLGGLYELAADLKNQGLA HHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure APPTTTPTTTPDWSRVRLHVVTGKGGTGKSTVAAALALGLASQGQQVLLCEVEGRQGIA CCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHH RMFDVDPLPYEERRIATGLHHDGRPPGVVHALHIDAESALLEYLAMYYKLGRAGRALDRF HHHCCCCCCCHHHHHHHCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHCCHHHHHH GVIEFATTIAPGVRDVLLTGKVFEAVQRNSRNRNATRYDAVVLDAPPTGRITQFLNVNEE HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHHHCCCHH LAGLAKVGPIKGQADTVMTLFRSPRTLVHLVTVLEEMPVQETADGISELRAARLPVGAVI HHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHH VNQVRPRDITPADLEAAVAGRLDTARIEADLDQAGVTGGTALVEGLIAEVRDHAERRALE HCCCCCCCCCCHHHHHHHHCCCCHHHHHHCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH DAQRAVVDSFGLPTYELPRLTSGVDLGGLYELAADLKNQGLA HHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]