Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119714581

Identifier: 119714581

GI number: 119714581

Start: 337121

End: 337762

Strand: Direct

Name: 119714581

Synonym: Noca_0315

Alternate gene names: NA

Gene position: 337121-337762 (Clockwise)

Preceding gene: 119714580

Following gene: 119714583

Centisome position: 6.76

GC content: 72.12

Gene sequence:

>642_bases
GTGATCCCGCACCCCGCCCGCTCCCGGAGAGGCTCCCCCATGGGCAAGACCCTGACCGCCCTGGTCGCCGCGCTCGCGAC
GATGCTCGTCCTCAGCTCCTGCGGTGGCGGGGAGAACGGCGACGGCGAGCCGGCCGCCCACACCGCGGCCGACGGCCAGC
GGTTCAACGACGCCGACGTCGCCTTCGCGACCGACATGGTCCAGCACCACGCCCAGGCCCTGGCGATGGTCGACCAGACC
ATGGGCCGCGACCTGGGCCCGCGGGTCGAGCGGCTCGCCGAGAGCATCCGGGCCGCCCAGGGGCCGGAGATCGAGACCAT
GACCGGATGGCTGACCGACTGGGACCAACCGATCCCCGAGACCGTGCGCGACCACGCCAACGCGCACGGCGGTCACGTCG
AGACGGACCCGGACATGCCCGGGATGATGTCGCCGGAGCAGATGGCCGAGCTCGAGGCGGCCCCTGACGCCGAGTTCGCG
CAGCTGTTCTTGACGATGATGATCGACCACCACGAGGGTGCCGTCGAGATGGCCCGGGCCGAGCAGCGCGACGGCCTGCA
CCCGGACGCCGTCGCCCTCGCCGAGCAGATCGAGTCCGCGCAGAACCGCGAGATCGCGACCATGCAGCGGATGCTGTCCT
GA

Upstream 100 bases:

>100_bases
GGGCTCCAGCATCCTGGTCGCCGTGAACGCACTGCTCCTCAAGCGGCTGCGGCTCCCCGAGGTGGGGCGCCGGCATGAGC
ATGTCTAGGGTCGGACATCT

Downstream 100 bases:

>100_bases
GCGGATCGGCGCGGCCCTACCGGTGGCGGGCCGGCCGCCGCTCGTCCGGGTCGTCGTCCCCGAGCTTCGCCCGGGGACGA
CGACAGCTCAGATCCTGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: Secreted Protein

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MIPHPARSRRGSPMGKTLTALVAALATMLVLSSCGGGENGDGEPAAHTAADGQRFNDADVAFATDMVQHHAQALAMVDQT
MGRDLGPRVERLAESIRAAQGPEIETMTGWLTDWDQPIPETVRDHANAHGGHVETDPDMPGMMSPEQMAELEAAPDAEFA
QLFLTMMIDHHEGAVEMARAEQRDGLHPDAVALAEQIESAQNREIATMQRMLS

Sequences:

>Translated_213_residues
MIPHPARSRRGSPMGKTLTALVAALATMLVLSSCGGGENGDGEPAAHTAADGQRFNDADVAFATDMVQHHAQALAMVDQT
MGRDLGPRVERLAESIRAAQGPEIETMTGWLTDWDQPIPETVRDHANAHGGHVETDPDMPGMMSPEQMAELEAAPDAEFA
QLFLTMMIDHHEGAVEMARAEQRDGLHPDAVALAEQIESAQNREIATMQRMLS
>Mature_213_residues
MIPHPARSRRGSPMGKTLTALVAALATMLVLSSCGGGENGDGEPAAHTAADGQRFNDADVAFATDMVQHHAQALAMVDQT
MGRDLGPRVERLAESIRAAQGPEIETMTGWLTDWDQPIPETVRDHANAHGGHVETDPDMPGMMSPEQMAELEAAPDAEFA
QLFLTMMIDHHEGAVEMARAEQRDGLHPDAVALAEQIESAQNREIATMQRMLS

Specific function: Unknown

COG id: COG3544

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22941; Mature: 22941

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
7.5 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
7.5 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPHPARSRRGSPMGKTLTALVAALATMLVLSSCGGGENGDGEPAAHTAADGQRFNDADV
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCHHH
AFATDMVQHHAQALAMVDQTMGRDLGPRVERLAESIRAAQGPEIETMTGWLTDWDQPIPE
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHH
TVRDHANAHGGHVETDPDMPGMMSPEQMAELEAAPDAEFAQLFLTMMIDHHEGAVEMARA
HHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHH
EQRDGLHPDAVALAEQIESAQNREIATMQRMLS
HHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHC
>Mature Secondary Structure
MIPHPARSRRGSPMGKTLTALVAALATMLVLSSCGGGENGDGEPAAHTAADGQRFNDADV
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCHHH
AFATDMVQHHAQALAMVDQTMGRDLGPRVERLAESIRAAQGPEIETMTGWLTDWDQPIPE
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHH
TVRDHANAHGGHVETDPDMPGMMSPEQMAELEAAPDAEFAQLFLTMMIDHHEGAVEMARA
HHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHH
EQRDGLHPDAVALAEQIESAQNREIATMQRMLS
HHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA