| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is acrR [C]
Identifier: 119714487
GI number: 119714487
Start: 236745
End: 237353
Strand: Direct
Name: acrR [C]
Synonym: Noca_0220
Alternate gene names: 119714487
Gene position: 236745-237353 (Clockwise)
Preceding gene: 119714486
Following gene: 119714488
Centisome position: 4.75
GC content: 71.43
Gene sequence:
>609_bases ATGACCGCGGCGGAGGGCCAGGACGGCTCCCGGCAGCGGATCGTCGCCGCGGCCGCGGAGATCGCGGCGGAGGCCGGCTA CGAGGGCACCACGATCTCGAAGGTCGTCAAGCGCTCCGGCCTGCCGGTGAGCTCGGTCTACTGGTTCTTCAAGGACAAGG ACGAGCTGATCGCCGAGGTCGTGCGCAGCAGCTTCGACACCTGGATCGGCGATCAGCCCACCTGGGACCCGCTGCCCAAG GGCGTCTCGGTGGGCGACGGGCTGCGGGCCGTGCTCGACAAGTCGGCGCTCAGCCTGGCCGCCGCGCCGGACTTCCTGCG GATCGGGCTGATGCTGACCCTCGAGCGGCGGGAGACCGAACCGGCCGCGCGCACACTGTTCCTGGACATCCGGATCGCCA TCGAGGACGAGCTGACCCGGTGGTTCGCCGCCGCGATCGGCACCCGCAAGGTGCGGCGCGCCCCGGACCTGCCGCGCCGG CTGGCCCGGATGGTCATCGCCGGCACCGACGGCCTGTTCCTCGCCCACCAGATCCACGACGTCGCCGACACCCACGAGTA CGTCGACATCCTCGTCACGATCGTCGAGTCGGCGATCGCCGCGGCCTGA
Upstream 100 bases:
>100_bases GGTTCTTCGTGGGGCGGCGGGCCGACCCGCGCTGGGACGTCGGGGCGATGGTCGAGCTGATGGCCGAGGGCATGGCGGCG TACGTCGAGGGGGTCGCGCG
Downstream 100 bases:
>100_bases CCGGCCGCGCGCCGCGTCGGCCCGCGTGACGCCGAGGTGAGCCCTTGCACAGTCTGCAGTCGTGTGCGACAGTCGTCCCT GTAGTGATCGTTACAGAGAG
Product: regulatory protein TetR
Products: NA
Alternate protein names: Transcriptional Regulatory Protein; TetR-Family Transcriptional Regulator; TetR Family Transcriptional Regulator
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MTAAEGQDGSRQRIVAAAAEIAAEAGYEGTTISKVVKRSGLPVSSVYWFFKDKDELIAEVVRSSFDTWIGDQPTWDPLPK GVSVGDGLRAVLDKSALSLAAAPDFLRIGLMLTLERRETEPAARTLFLDIRIAIEDELTRWFAAAIGTRKVRRAPDLPRR LARMVIAGTDGLFLAHQIHDVADTHEYVDILVTIVESAIAAA
Sequences:
>Translated_202_residues MTAAEGQDGSRQRIVAAAAEIAAEAGYEGTTISKVVKRSGLPVSSVYWFFKDKDELIAEVVRSSFDTWIGDQPTWDPLPK GVSVGDGLRAVLDKSALSLAAAPDFLRIGLMLTLERRETEPAARTLFLDIRIAIEDELTRWFAAAIGTRKVRRAPDLPRR LARMVIAGTDGLFLAHQIHDVADTHEYVDILVTIVESAIAAA >Mature_201_residues TAAEGQDGSRQRIVAAAAEIAAEAGYEGTTISKVVKRSGLPVSSVYWFFKDKDELIAEVVRSSFDTWIGDQPTWDPLPKG VSVGDGLRAVLDKSALSLAAAPDFLRIGLMLTLERRETEPAARTLFLDIRIAIEDELTRWFAAAIGTRKVRRAPDLPRRL ARMVIAGTDGLFLAHQIHDVADTHEYVDILVTIVESAIAAA
Specific function: Potential Regulator Protein For The Acrab Genes. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22029; Mature: 21898
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAAEGQDGSRQRIVAAAAEIAAEAGYEGTTISKVVKRSGLPVSSVYWFFKDKDELIAEV CCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHEEEECCHHHHHHHH VRSSFDTWIGDQPTWDPLPKGVSVGDGLRAVLDKSALSLAAAPDFLRIGLMLTLERRETE HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHEEEHHHCCC PAARTLFLDIRIAIEDELTRWFAAAIGTRKVRRAPDLPRRLARMVIAGTDGLFLAHQIHD HHHHEEEEEEEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHH VADTHEYVDILVTIVESAIAAA HHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TAAEGQDGSRQRIVAAAAEIAAEAGYEGTTISKVVKRSGLPVSSVYWFFKDKDELIAEV CCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHEEEECCHHHHHHHH VRSSFDTWIGDQPTWDPLPKGVSVGDGLRAVLDKSALSLAAAPDFLRIGLMLTLERRETE HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHEEEHHHCCC PAARTLFLDIRIAIEDELTRWFAAAIGTRKVRRAPDLPRRLARMVIAGTDGLFLAHQIHD HHHHEEEEEEEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHH VADTHEYVDILVTIVESAIAAA HHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA