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The map label for this gene is livH [H]

Identifier: 119714484

GI number: 119714484

Start: 233538

End: 234467

Strand: Reverse

Name: livH [H]

Synonym: Noca_0217

Alternate gene names: 119714484

Gene position: 234467-233538 (Counterclockwise)

Preceding gene: 119714485

Following gene: 119714483

Centisome position: 4.7

GC content: 72.37

Gene sequence:

>930_bases
ATGGACAGCCTGATCAGCGCCGACTTCTGGCAGCTCACCGCGAACGGCCTGGTCCGCGGGTCGTTCTACGCGGCCCTCGG
CGCCGGGCTGGCGCTGGTGCTGGGCGTGACGGCGCGCTTCCACTTCGCCTACACGCTCACCTACACGTTCGCTCCGTACG
CCGCGTTCCTGGCGATGGACCGCCAGGGCGTGTCGTTCTGGCCGGCGGCGCTGCTCGGACTCGCCGCCGCCGTGGTGCTC
AGCGTGCTGATCGAGCTGCTGGTCTACCAGCCGGTCGCCCGGCGTGCCGGGGACCGCGCGATGCTCGCCGTCCTGGTCAC
CTCGATCGGCGTCAGCGCCGCCGGCATCGCCGCCCTGCAGCTGGTCGCCGGCACCAGCAGCGTGCCGTTCTACGGCCCCG
CGATGACGATCTCGGAGTACGGCCCGGTGCGGGTCTCGAGCTTCGAGCTCTACCAGGTCCTCACCTGCGTCGGCCTGGTC
GTCGCGCTCGCGGCGTTCCTCGCGCTCACCCCGCTCGGCCGCTCGATCCGCGCGGTCCGGAGCAACCCGGGGCTCGCCGG
CCTCCTCGGCATCGGCGTCACCCGGGTGAACCTCACCGTCTTCGCGATCGCCGGGCTGTTCTCCGGCGCCGGCGCGCTCT
GGTACGGCCTGCTGTACACCGTCGAGCCGGTGATGGGCGACAAGGTCGTGATCTACGGCTTCGTGGTCGCCTTCCTCGCC
GGCACCCGCACCAGCCCGCTGCGCGCGCTCCCCGTGGGACTCGGCCTCGGGCTGCTCGAGCAGTGGTCGTCGATGTGGGT
CTCGGTGCAGTGGACCCAGACGGCGGTGTTCACCGTGCTCGTCGTCTACCTGGTGGCCCTGTCCGGTCGCGGCCGTTGGG
GTCGGCTGCTGTCCCCCCGGCCCCGCGCCCGGCTCGAGAAGGCGGTCTGA

Upstream 100 bases:

>100_bases
CGACGTCAACGCCGCCGGCTTCGCCCTGAACTGAGCGGCCCCGGGGGCGCGCCGGCCGCGGCGCGCCCCCTTCCCGTCGT
ACCGACCACCGAGGAACCCG

Downstream 100 bases:

>100_bases
CCATGTGGCTCAACTACCTCGTCCAGGCCGTGCTCCTGGCCTCGCTCGCCCTGTCGGTGAACCTGCTCGTGGGCTACGCC
GGCCAGGTGTCGGTCGCGCA

Product: inner-membrane translocator

Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]

Alternate protein names: LIV-I protein H [H]

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MDSLISADFWQLTANGLVRGSFYAALGAGLALVLGVTARFHFAYTLTYTFAPYAAFLAMDRQGVSFWPAALLGLAAAVVL
SVLIELLVYQPVARRAGDRAMLAVLVTSIGVSAAGIAALQLVAGTSSVPFYGPAMTISEYGPVRVSSFELYQVLTCVGLV
VALAAFLALTPLGRSIRAVRSNPGLAGLLGIGVTRVNLTVFAIAGLFSGAGALWYGLLYTVEPVMGDKVVIYGFVVAFLA
GTRTSPLRALPVGLGLGLLEQWSSMWVSVQWTQTAVFTVLVVYLVALSGRGRWGRLLSPRPRARLEKAV

Sequences:

>Translated_309_residues
MDSLISADFWQLTANGLVRGSFYAALGAGLALVLGVTARFHFAYTLTYTFAPYAAFLAMDRQGVSFWPAALLGLAAAVVL
SVLIELLVYQPVARRAGDRAMLAVLVTSIGVSAAGIAALQLVAGTSSVPFYGPAMTISEYGPVRVSSFELYQVLTCVGLV
VALAAFLALTPLGRSIRAVRSNPGLAGLLGIGVTRVNLTVFAIAGLFSGAGALWYGLLYTVEPVMGDKVVIYGFVVAFLA
GTRTSPLRALPVGLGLGLLEQWSSMWVSVQWTQTAVFTVLVVYLVALSGRGRWGRLLSPRPRARLEKAV
>Mature_309_residues
MDSLISADFWQLTANGLVRGSFYAALGAGLALVLGVTARFHFAYTLTYTFAPYAAFLAMDRQGVSFWPAALLGLAAAVVL
SVLIELLVYQPVARRAGDRAMLAVLVTSIGVSAAGIAALQLVAGTSSVPFYGPAMTISEYGPVRVSSFELYQVLTCVGLV
VALAAFLALTPLGRSIRAVRSNPGLAGLLGIGVTRVNLTVFAIAGLFSGAGALWYGLLYTVEPVMGDKVVIYGFVVAFLA
GTRTSPLRALPVGLGLGLLEQWSSMWVSVQWTQTAVFTVLVVYLVALSGRGRWGRLLSPRPRARLEKAV

Specific function: Part of the binding-protein-dependent transport system for branched-chain amino acids. Probably responsible for the translocation of the substrates across the membrane [H]

COG id: COG0559

COG function: function code E; Branched-chain amino acid ABC-type transport system, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789866, Length=293, Percent_Identity=26.6211604095563, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 32637; Mature: 32637

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSLISADFWQLTANGLVRGSFYAALGAGLALVLGVTARFHFAYTLTYTFAPYAAFLAMD
CCCCCCCHHHHHHHCCEEHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEHHHHHHHHHHHC
RQGVSFWPAALLGLAAAVVLSVLIELLVYQPVARRAGDRAMLAVLVTSIGVSAAGIAALQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHH
LVAGTSSVPFYGPAMTISEYGPVRVSSFELYQVLTCVGLVVALAAFLALTPLGRSIRAVR
HHHCCCCCCCCCCCEEECCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
SNPGLAGLLGIGVTRVNLTVFAIAGLFSGAGALWYGLLYTVEPVMGDKVVIYGFVVAFLA
CCCCCEEHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
GTRTSPLRALPVGLGLGLLEQWSSMWVSVQWTQTAVFTVLVVYLVALSGRGRWGRLLSPR
CCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PRARLEKAV
CHHHHHCCC
>Mature Secondary Structure
MDSLISADFWQLTANGLVRGSFYAALGAGLALVLGVTARFHFAYTLTYTFAPYAAFLAMD
CCCCCCCHHHHHHHCCEEHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEHHHHHHHHHHHC
RQGVSFWPAALLGLAAAVVLSVLIELLVYQPVARRAGDRAMLAVLVTSIGVSAAGIAALQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHH
LVAGTSSVPFYGPAMTISEYGPVRVSSFELYQVLTCVGLVVALAAFLALTPLGRSIRAVR
HHHCCCCCCCCCCCEEECCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
SNPGLAGLLGIGVTRVNLTVFAIAGLFSGAGALWYGLLYTVEPVMGDKVVIYGFVVAFLA
CCCCCEEHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
GTRTSPLRALPVGLGLGLLEQWSSMWVSVQWTQTAVFTVLVVYLVALSGRGRWGRLLSPR
CCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PRARLEKAV
CHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]

Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]