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The map label for this gene is fccA [H]

Identifier: 119714465

GI number: 119714465

Start: 212830

End: 214140

Strand: Reverse

Name: fccA [H]

Synonym: Noca_0198

Alternate gene names: 119714465

Gene position: 214140-212830 (Counterclockwise)

Preceding gene: 119714466

Following gene: 119714464

Centisome position: 4.29

GC content: 76.66

Gene sequence:

>1311_bases
GTGGAGCGGATCGAGGTCGACGTCGCGGTCGTCGGCGCCGGCGCCTGCGGCGTGCTGACCGCGCTGCGTGCGGCCGAGGA
CCCGGACCTCGTCATCGGGGTCTTCGAGAAGAGCACCCGCGAGGGCTGCAACGCCGAGATCTCCAGCGGCAGCCTCGCCG
CCGGCGGCACCCGCTTCCAGCGTGCCGCCGGCATCGACGACTCCCCCGCCCGGCACGCCGAGGACATCCTCGCGGCCAGC
GGCGACACCGCCGCGGCCTCCGTCGTCGAGGCGCTGTGCGCGGCCGCCCCGCAGTACGTCGAGTGGCTCGCCGACCGGCT
CGGCTACCCGATCGAGATCGGCACCGACCTGCCGCGCGCCGGCATGTCCGTGCCGCGGCTGCACAGCGACGTCGGCCGCC
AGGGCGGGCGCCGACTGATGCGGCACCTGCGCGACGCACTCGCTGCCCGGCCGAACGTCGCCCTGGTCGACGAGGCGCCC
GCCATGCGCCTGACCGCCTCGGCCGACGGGCGGGTCACGGGCCTGGTGGTCGAGCAGAACCACACCGAGATCGAGGCCTC
CGCCTCGACCGTCGTGCTCGCGCTGGACGGCTTCGCGGCCAACCCGGCCCTGATGAAGGAGCACTGCGCGGCGCTGGGCG
ACCCGTTCTACGGCGGGGTGTCGACCAGCACCGGCGACGCCGTCGCGTGGCTCACCGAGCTCGGCGCCGACTTCCGGAAC
ATGGGTGCCTGCCTGCGCTCCGGCCTGGTGGTCGTCGGGCACGGCACCCGGGTCAGCCCGTCGCTGCCGTTCTACGGCGC
GGTGCTGCTCGACCTCGAGGGTCGCCGGTTCGTCGACGAGGAGGCGCACGGCTACTCCAGCCTGGCCGGGCTGCTCCAGG
GGCTGCCGGCCCAGCGGGCGGCGCTGGTCTGGGACGCCGAGGCGCACGCCGCCACCCGGGAGTCCGAGCTGATGCGCGAG
ACGATCCGCGCCGTCGGCTTCACGACGTACGACGACCGGGCCGGCCTGGCCGCGGCGCTGGGCGCGGACCCCGAGCTCGA
GCCGCTGCCCGGGCGCCGGCGCCTGGCGCCGCCGTACCACCTGGCCTGGGTGACCCACGGCGTGCTGGCCACCCAGGGCG
GCGCCGTGGTCGACCCGCGCGGGCAGGTGCTGCGCCCCGACGGCTCGGCGATCCCGGGACTGCGCGCCGGCGGCGGGACG
GCCGCCGGGCTCGCCGGCCCGGACTCGAGCGGCTACAGCTCCGGCAACGGGCTGCTCTCGGCGTTCGGCATGGGCTGGAT
CGTCGGCACCGAGCTGGCCGGCGGCCGCTGA

Upstream 100 bases:

>100_bases
GGGCGACCGGGCTGCACCCCGCGCGGACCGGCTTCCACTACTCCCGTCCCGAGCGTGGCCTGGTCGACGCCGCCCGCGCC
TTCTACGGGCTGGACCTCTA

Downstream 100 bases:

>100_bases
GGATCGGGGCCGCCCCACCTCTTGCGGCCCCCGGCCGGCGGCCCTAGGTTGCTGGCACCTGTGATCGGCGATCACGTCCT
CGGGAGGGACCTCATGCGCC

Product: fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein

Products: NA

Alternate protein names: Flavocytochrome c; Flavocytochrome c3; Fcc3 [H]

Number of amino acids: Translated: 436; Mature: 436

Protein sequence:

>436_residues
MERIEVDVAVVGAGACGVLTALRAAEDPDLVIGVFEKSTREGCNAEISSGSLAAGGTRFQRAAGIDDSPARHAEDILAAS
GDTAAASVVEALCAAAPQYVEWLADRLGYPIEIGTDLPRAGMSVPRLHSDVGRQGGRRLMRHLRDALAARPNVALVDEAP
AMRLTASADGRVTGLVVEQNHTEIEASASTVVLALDGFAANPALMKEHCAALGDPFYGGVSTSTGDAVAWLTELGADFRN
MGACLRSGLVVVGHGTRVSPSLPFYGAVLLDLEGRRFVDEEAHGYSSLAGLLQGLPAQRAALVWDAEAHAATRESELMRE
TIRAVGFTTYDDRAGLAAALGADPELEPLPGRRRLAPPYHLAWVTHGVLATQGGAVVDPRGQVLRPDGSAIPGLRAGGGT
AAGLAGPDSSGYSSGNGLLSAFGMGWIVGTELAGGR

Sequences:

>Translated_436_residues
MERIEVDVAVVGAGACGVLTALRAAEDPDLVIGVFEKSTREGCNAEISSGSLAAGGTRFQRAAGIDDSPARHAEDILAAS
GDTAAASVVEALCAAAPQYVEWLADRLGYPIEIGTDLPRAGMSVPRLHSDVGRQGGRRLMRHLRDALAARPNVALVDEAP
AMRLTASADGRVTGLVVEQNHTEIEASASTVVLALDGFAANPALMKEHCAALGDPFYGGVSTSTGDAVAWLTELGADFRN
MGACLRSGLVVVGHGTRVSPSLPFYGAVLLDLEGRRFVDEEAHGYSSLAGLLQGLPAQRAALVWDAEAHAATRESELMRE
TIRAVGFTTYDDRAGLAAALGADPELEPLPGRRRLAPPYHLAWVTHGVLATQGGAVVDPRGQVLRPDGSAIPGLRAGGGT
AAGLAGPDSSGYSSGNGLLSAFGMGWIVGTELAGGR
>Mature_436_residues
MERIEVDVAVVGAGACGVLTALRAAEDPDLVIGVFEKSTREGCNAEISSGSLAAGGTRFQRAAGIDDSPARHAEDILAAS
GDTAAASVVEALCAAAPQYVEWLADRLGYPIEIGTDLPRAGMSVPRLHSDVGRQGGRRLMRHLRDALAARPNVALVDEAP
AMRLTASADGRVTGLVVEQNHTEIEASASTVVLALDGFAANPALMKEHCAALGDPFYGGVSTSTGDAVAWLTELGADFRN
MGACLRSGLVVVGHGTRVSPSLPFYGAVLLDLEGRRFVDEEAHGYSSLAGLLQGLPAQRAALVWDAEAHAATRESELMRE
TIRAVGFTTYDDRAGLAAALGADPELEPLPGRRRLAPPYHLAWVTHGVLATQGGAVVDPRGQVLRPDGSAIPGLRAGGGT
AAGLAGPDSSGYSSGNGLLSAFGMGWIVGTELAGGR

Specific function: Catalyzes fumarate reduction using artificial electron donors such as methyl viologen. The physiological reductant is unknown, but evidence indicates that flavocytochrome c participates in electron transfer from formate to fumarate and possibly also to tr

COG id: COG1053

COG function: function code C; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cytochrome c domain [H]

Homologues:

Organism=Caenorhabditis elegans, GI71986328, Length=456, Percent_Identity=27.1929824561404, Blast_Score=72, Evalue=7e-13,
Organism=Saccharomyces cerevisiae, GI6320788, Length=479, Percent_Identity=23.1732776617954, Blast_Score=86, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003953
- InterPro:   IPR013027
- InterPro:   IPR010960
- InterPro:   IPR011031
- InterPro:   IPR012286
- InterPro:   IPR007087 [H]

Pfam domain/function: PF00890 FAD_binding_2 [H]

EC number: =1.3.99.1 [H]

Molecular weight: Translated: 44940; Mature: 44940

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERIEVDVAVVGAGACGVLTALRAAEDPDLVIGVFEKSTREGCNAEISSGSLAAGGTRFQ
CCEEEEEEEEECCCHHHHHHHHHCCCCCCEEEEEECHHCCCCCCCCCCCCCCCCCCCHHH
RAAGIDDSPARHAEDILAASGDTAAASVVEALCAAAPQYVEWLADRLGYPIEIGTDLPRA
HHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEECCCCCCC
GMSVPRLHSDVGRQGGRRLMRHLRDALAARPNVALVDEAPAMRLTASADGRVTGLVVEQN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEECCCCCEEEEEEECC
HTEIEASASTVVLALDGFAANPALMKEHCAALGDPFYGGVSTSTGDAVAWLTELGADFRN
CCEEECCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCHHH
MGACLRSGLVVVGHGTRVSPSLPFYGAVLLDLEGRRFVDEEAHGYSSLAGLLQGLPAQRA
HHHHHHCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCHHHCCHHHHHHHHHCCCCCCE
ALVWDAEAHAATRESELMRETIRAVGFTTYDDRAGLAAALGADPELEPLPGRRRLAPPYH
EEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCE
LAWVTHGVLATQGGAVVDPRGQVLRPDGSAIPGLRAGGGTAAGLAGPDSSGYSSGNGLLS
EHHHHHHHHEECCCEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
AFGMGWIVGTELAGGR
HHCCHHEEECCCCCCC
>Mature Secondary Structure
MERIEVDVAVVGAGACGVLTALRAAEDPDLVIGVFEKSTREGCNAEISSGSLAAGGTRFQ
CCEEEEEEEEECCCHHHHHHHHHCCCCCCEEEEEECHHCCCCCCCCCCCCCCCCCCCHHH
RAAGIDDSPARHAEDILAASGDTAAASVVEALCAAAPQYVEWLADRLGYPIEIGTDLPRA
HHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEECCCCCCC
GMSVPRLHSDVGRQGGRRLMRHLRDALAARPNVALVDEAPAMRLTASADGRVTGLVVEQN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEECCCCCEEEEEEECC
HTEIEASASTVVLALDGFAANPALMKEHCAALGDPFYGGVSTSTGDAVAWLTELGADFRN
CCEEECCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCHHH
MGACLRSGLVVVGHGTRVSPSLPFYGAVLLDLEGRRFVDEEAHGYSSLAGLLQGLPAQRA
HHHHHHCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCHHHCCHHHHHHHHHCCCCCCE
ALVWDAEAHAATRESELMRETIRAVGFTTYDDRAGLAAALGADPELEPLPGRRRLAPPYH
EEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCE
LAWVTHGVLATQGGAVVDPRGQVLRPDGSAIPGLRAGGGTAAGLAGPDSSGYSSGNGLLS
EHHHHHHHHEECCCEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
AFGMGWIVGTELAGGR
HHCCHHEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1333793 [H]