| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714432
Identifier: 119714432
GI number: 119714432
Start: 179430
End: 179804
Strand: Reverse
Name: 119714432
Synonym: Noca_0165
Alternate gene names: NA
Gene position: 179804-179430 (Counterclockwise)
Preceding gene: 119714433
Following gene: 119714431
Centisome position: 3.61
GC content: 69.87
Gene sequence:
>375_bases ATGGCTGAGTCGTTCTACGACGCGTTCGCGCCCGAGGAGATCGCGCGCATCGCTGCGGCGGGCACCCGCGTCCACGTCCC GGAGGGCTGGTCGCCGATCTGGGAGAAGACGCCGGCCGACAAGGCGTACATCATCCTGGACGGCACGGTCTCGGTGCGCC ACCGCGGCGAGGAGATCGCCCAGCTGGGTGCCGGCGAGATCGTCGGCGAGGCCGCGATCGTCAACCACTCGCTGCGCACG GCGTCGATCGTCGCCCTCACGCCGTTGGAGCTGATCCACTTCACCGACGAGGCGGTACGCCGGCTCTGCGCCGAGATGCC CGCCTTCAAGACCGCCCTCGAGGCCGTCGCGGTGGAACGGTTCGGCCGAAACTGA
Upstream 100 bases:
>100_bases GGCTGACCGCGGCTGGGGTGTCGACCCGCCAGCCGTTTACAGCGAGCCCGCGCTCGGGAAGGATCCGCCCCGGGGAGGAC CAACCGCGAGAGGCGGAGAC
Downstream 100 bases:
>100_bases CCGAGCAGCGTCCACCCGACCGGCCCGCGGCCCTGGCCGGGGCCGAGGAGACGGTGGAGGAGCTGCTCCTCGGGGCCCTC CCCCACCTGACCCGCGGCGA
Product: cyclic nucleotide-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MAESFYDAFAPEEIARIAAAGTRVHVPEGWSPIWEKTPADKAYIILDGTVSVRHRGEEIAQLGAGEIVGEAAIVNHSLRT ASIVALTPLELIHFTDEAVRRLCAEMPAFKTALEAVAVERFGRN
Sequences:
>Translated_124_residues MAESFYDAFAPEEIARIAAAGTRVHVPEGWSPIWEKTPADKAYIILDGTVSVRHRGEEIAQLGAGEIVGEAAIVNHSLRT ASIVALTPLELIHFTDEAVRRLCAEMPAFKTALEAVAVERFGRN >Mature_123_residues AESFYDAFAPEEIARIAAAGTRVHVPEGWSPIWEKTPADKAYIILDGTVSVRHRGEEIAQLGAGEIVGEAAIVNHSLRTA SIVALTPLELIHFTDEAVRRLCAEMPAFKTALEAVAVERFGRN
Specific function: Unknown
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13484; Mature: 13353
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: PS00889 CNMP_BINDING_2 ; PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAESFYDAFAPEEIARIAAAGTRVHVPEGWSPIWEKTPADKAYIILDGTVSVRHRGEEIA CCCCHHHHCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCEEEEEECCEEEHHHHHHHH QLGAGEIVGEAAIVNHSLRTASIVALTPLELIHFTDEAVRRLCAEMPAFKTALEAVAVER HCCCCHHHHHHHHHHCCCCHHEEEEECHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH FGRN HCCC >Mature Secondary Structure AESFYDAFAPEEIARIAAAGTRVHVPEGWSPIWEKTPADKAYIILDGTVSVRHRGEEIA CCCHHHHCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCEEEEEECCEEEHHHHHHHH QLGAGEIVGEAAIVNHSLRTASIVALTPLELIHFTDEAVRRLCAEMPAFKTALEAVAVER HCCCCHHHHHHHHHHCCCCHHEEEEECHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH FGRN HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA