| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
Click here to switch to the map view.
The map label for this gene is pspE [C]
Identifier: 119714423
GI number: 119714423
Start: 171864
End: 172199
Strand: Reverse
Name: pspE [C]
Synonym: Noca_0156
Alternate gene names: 119714423
Gene position: 172199-171864 (Counterclockwise)
Preceding gene: 119714424
Following gene: 119714420
Centisome position: 3.45
GC content: 74.7
Gene sequence:
>336_bases ATGACCCAGGTCCCGACCGTCCCGATCGAGGGCGTGCCGCACCCGCTGCCCGACGGGCTGGTGGTGCTCGACGTCCGGGA GCCGGCGGAGTGGGAGCACGGCCACATCGAGGGCGCCGTGCACATCCCACTCGCGCTGTTGCCACTGCGCCACACCGAGC TCCCCGAGGCACAGACCCTCGTCGTGTGCCGGGTCGGCGCCCGATCCGCCCAGGCGGTGGCCTGGCTCCAGCAGCAGGGC CACGACGCGGTCAACCTGGCCGGTGGCCTCCTCGACTGGGAGGCGGCCGGGCGCCCGATGGTGAGCGACACCGGCCGGCC GCCCCAGGTCGTCTGA
Upstream 100 bases:
>100_bases TACTGCCCGACCTGCCAGACCGGCGGCAAGCCGCTCGCCGACCGACGGCTCAGCAAGCTGCTGAAGTAGCACCGAGCCGA ACCCGAGCCGAGGGAGCACG
Downstream 100 bases:
>100_bases GCCGCCGGACCCACGCAGGTAACGCGGCGCCTACGGGCTCTCCGTCAGCTCGCTCATGTTCGAGGCGAGCTCGGACATCA TCGACTCCAGCTCCTCGGGG
Product: rhodanese domain-containing protein
Products: NA
Alternate protein names: Rhodanese Domain Protein; Rhodanese-Related Sulfurtransferase; Rhodanese-Like Protein; Rhodanese Sulfurtransferase; Thiosulfate Sulfurtransferase; Rhodanese Domain Containing Protein; Sulfurtransferase; Rhodanese-Like Domain-Containing Protein; Rhodanese Family Protein; Rhodanese-Like; Rhodanese-Related Sulfurtransferase-Like Protein; Metallo-Beta-Lactamase; Metallo-Beta-Lactamase Family Protein
Number of amino acids: Translated: 111; Mature: 110
Protein sequence:
>111_residues MTQVPTVPIEGVPHPLPDGLVVLDVREPAEWEHGHIEGAVHIPLALLPLRHTELPEAQTLVVCRVGARSAQAVAWLQQQG HDAVNLAGGLLDWEAAGRPMVSDTGRPPQVV
Sequences:
>Translated_111_residues MTQVPTVPIEGVPHPLPDGLVVLDVREPAEWEHGHIEGAVHIPLALLPLRHTELPEAQTLVVCRVGARSAQAVAWLQQQG HDAVNLAGGLLDWEAAGRPMVSDTGRPPQVV >Mature_110_residues TQVPTVPIEGVPHPLPDGLVVLDVREPAEWEHGHIEGAVHIPLALLPLRHTELPEAQTLVVCRVGARSAQAVAWLQQQGH DAVNLAGGLLDWEAAGRPMVSDTGRPPQVV
Specific function: Unknown
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11888; Mature: 11757
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQVPTVPIEGVPHPLPDGLVVLDVREPAEWEHGHIEGAVHIPLALLPLRHTELPEAQTL CCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEECCEEEEECCCCCCCCCEEE VVCRVGARSAQAVAWLQQQGHDAVNLAGGLLDWEAAGRPMVSDTGRPPQVV EEEECCCCCHHHHHHHHHCCCCEEEECCCEEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TQVPTVPIEGVPHPLPDGLVVLDVREPAEWEHGHIEGAVHIPLALLPLRHTELPEAQTL CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEECCEEEEECCCCCCCCCEEE VVCRVGARSAQAVAWLQQQGHDAVNLAGGLLDWEAAGRPMVSDTGRPPQVV EEEECCCCCHHHHHHHHHCCCCEEEECCCEEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA