| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714379
Identifier: 119714379
GI number: 119714379
Start: 125387
End: 125824
Strand: Direct
Name: 119714379
Synonym: Noca_0112
Alternate gene names: NA
Gene position: 125387-125824 (Clockwise)
Preceding gene: 119714377
Following gene: 119714380
Centisome position: 2.51
GC content: 73.06
Gene sequence:
>438_bases GTGGACGCACCGCGCGACCGGATCTGGTCGGCCCTCACCGATCCCCGCCTGGTCGCCGAGCTGACGCCGTTCGTCCGGGC CATCCACGAGGACGGCGCCCATTGGCGCTGGGAGCTGACCGCCCTGAAGGTGCTCGGCGTCGGCGTCGCCCCCGCGTTCA CCGAGCAGATGACGTACGACGAGCCGGAGCGGATCGAGTTCCGCCACGACCCGCCTGCGGGCACGACCGAGCGGTCGTCG GTCGAGGGGTGGTACGACCTGGCGGAGCACCCGGCCGGCACGCGGCTGACCACCGCGCTCGAGATCACACTGGACCTGCC GCTGCCCAGGATCTCCGGGCCGGCGGTGCGGGCCGCGATGAGCCGGGTCATCGACCAGATGGGTGACCGGTTCGCCCAGA ACCTGCTCGCCCACCTGGGCGCCCGGCAGGTGGCCTGA
Upstream 100 bases:
>100_bases GCGCCGCCGGAGCGGCGTCCGGGAGCACATCCGCGGCTGAGGATCTGGGTAGTGGCCACCCATGACCTCGTTCTCCGCAG ACACGCGTGCCGAGGCGGTC
Downstream 100 bases:
>100_bases GCCGGCCAGGCCGCGGCGTACGCCTGCGGACTTGTCGGGCAATCCCTGCACTCCTGGGCCGAAGTTTCGGCCGAACAGTG CAGGTTTCCCCGGGTACCCG
Product: cyclase/dehydrase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MDAPRDRIWSALTDPRLVAELTPFVRAIHEDGAHWRWELTALKVLGVGVAPAFTEQMTYDEPERIEFRHDPPAGTTERSS VEGWYDLAEHPAGTRLTTALEITLDLPLPRISGPAVRAAMSRVIDQMGDRFAQNLLAHLGARQVA
Sequences:
>Translated_145_residues MDAPRDRIWSALTDPRLVAELTPFVRAIHEDGAHWRWELTALKVLGVGVAPAFTEQMTYDEPERIEFRHDPPAGTTERSS VEGWYDLAEHPAGTRLTTALEITLDLPLPRISGPAVRAAMSRVIDQMGDRFAQNLLAHLGARQVA >Mature_145_residues MDAPRDRIWSALTDPRLVAELTPFVRAIHEDGAHWRWELTALKVLGVGVAPAFTEQMTYDEPERIEFRHDPPAGTTERSS VEGWYDLAEHPAGTRLTTALEITLDLPLPRISGPAVRAAMSRVIDQMGDRFAQNLLAHLGARQVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16149; Mature: 16149
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAPRDRIWSALTDPRLVAELTPFVRAIHEDGAHWRWELTALKVLGVGVAPAFTEQMTYD CCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCCHHHHHHCCCC EPERIEFRHDPPAGTTERSSVEGWYDLAEHPAGTRLTTALEITLDLPLPRISGPAVRAAM CCCCEEECCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCCHHHHHHH SRVIDQMGDRFAQNLLAHLGARQVA HHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDAPRDRIWSALTDPRLVAELTPFVRAIHEDGAHWRWELTALKVLGVGVAPAFTEQMTYD CCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCCHHHHHHCCCC EPERIEFRHDPPAGTTERSSVEGWYDLAEHPAGTRLTTALEITLDLPLPRISGPAVRAAM CCCCEEECCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCCHHHHHHH SRVIDQMGDRFAQNLLAHLGARQVA HHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA