Click here to switch to the map view.

The map label for this gene is bkdR [H]

Identifier: 119714339

GI number: 119714339

Start: 80377

End: 80844

Strand: Direct

Name: bkdR [H]

Synonym: Noca_0071

Alternate gene names: 119714339

Gene position: 80377-80844 (Clockwise)

Preceding gene: 119714335

Following gene: 119714341

Centisome position: 1.61

GC content: 62.39

Gene sequence:

>468_bases
ATGGATTCGCTTGATCGCGCAATAATCGACCATCTGCGCCGCAACGCTCATCTAACAAACACCGAGCTGGCTGAACTGGT
CGGCTTGACGCCATCACCCTGCCTGCGCCGCGTGCGTCGACTCGAGAACGAGGGCATCATCCTCGGCTACCACGCCCACA
TCGCTCCGGTAGCGCTTCACCGCGGGTTTGAGGTGCATGTCGACCTCGAGTTAGCCGACCAGACGAAGCAAACAATCCGC
GTCTTCGAGGCCGCTCTGATCGCCTACGACGAGGTCGTGGAAGCGCGCCGGATGTTCGGCGCACCGGACTACCAAGCCCT
GGTCGCTGTGACCGACCTGCCTGCCTACGAGCACTTCTTGACAGAGCACCTCACGGCCCTGCCGGGCCTGGGCAGACTCC
AGTCCCGCTTCCCCATGAAGACCATCAAGACCGACACACCAAGCACGCCGCCCACCACACGCCATTGA

Upstream 100 bases:

>100_bases
GGACCCTCCCGCCATCGGAGGAGGGCACGATACGTCACAAGGCCCGGCATAGGATGGCAAGAACAACTCCGTATTACCCT
CTGCATGGCAAAATAGAGGG

Downstream 100 bases:

>100_bases
CGGCCGCTCACTCCCGGACCAAGCGCGAAGATCGCTGCGCCTGAACCCCTTGGTGGCAATCGGTCTACGGGACAGTGAGT
GACCTTTGTGCGCGATGACG

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MDSLDRAIIDHLRRNAHLTNTELAELVGLTPSPCLRRVRRLENEGIILGYHAHIAPVALHRGFEVHVDLELADQTKQTIR
VFEAALIAYDEVVEARRMFGAPDYQALVAVTDLPAYEHFLTEHLTALPGLGRLQSRFPMKTIKTDTPSTPPTTRH

Sequences:

>Translated_155_residues
MDSLDRAIIDHLRRNAHLTNTELAELVGLTPSPCLRRVRRLENEGIILGYHAHIAPVALHRGFEVHVDLELADQTKQTIR
VFEAALIAYDEVVEARRMFGAPDYQALVAVTDLPAYEHFLTEHLTALPGLGRLQSRFPMKTIKTDTPSTPPTTRH
>Mature_155_residues
MDSLDRAIIDHLRRNAHLTNTELAELVGLTPSPCLRRVRRLENEGIILGYHAHIAPVALHRGFEVHVDLELADQTKQTIR
VFEAALIAYDEVVEARRMFGAPDYQALVAVTDLPAYEHFLTEHLTALPGLGRLQSRFPMKTIKTDTPSTPPTTRH

Specific function: Positive regulator of the bkd operon for branched-chain keto acid dehydrogenase complex [H]

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=143, Percent_Identity=34.965034965035, Blast_Score=93, Evalue=8e-21,
Organism=Escherichia coli, GI87081742, Length=146, Percent_Identity=31.5068493150685, Blast_Score=83, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 17451; Mature: 17451

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS00519 HTH_ASNC_1 ; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSLDRAIIDHLRRNAHLTNTELAELVGLTPSPCLRRVRRLENEGIILGYHAHIAPVALH
CCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHH
RGFEVHVDLELADQTKQTIRVFEAALIAYDEVVEARRMFGAPDYQALVAVTDLPAYEHFL
CCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEECCCCHHHHHH
TEHLTALPGLGRLQSRFPMKTIKTDTPSTPPTTRH
HHHHHHCCCCCHHHHHCCCHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MDSLDRAIIDHLRRNAHLTNTELAELVGLTPSPCLRRVRRLENEGIILGYHAHIAPVALH
CCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHH
RGFEVHVDLELADQTKQTIRVFEAALIAYDEVVEARRMFGAPDYQALVAVTDLPAYEHFL
CCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEECCCCHHHHHH
TEHLTALPGLGRLQSRFPMKTIKTDTPSTPPTTRH
HHHHHHCCCCCHHHHHCCCHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8320210 [H]