| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714282
Identifier: 119714282
GI number: 119714282
Start: 13975
End: 14715
Strand: Reverse
Name: 119714282
Synonym: Noca_0010
Alternate gene names: NA
Gene position: 14715-13975 (Counterclockwise)
Preceding gene: 119714283
Following gene: NA
Centisome position: 0.3
GC content: 71.52
Gene sequence:
>741_bases ATGACGAAGTCGCAGAGCCCGATTGCCTCGGGGGAGGTCGAGCGGCTCGCCGCCCAGCGGGTGGCCGCCGACGAGCAGCG GATCACCGGCTCCCGGCGGACGAACGTCTCGCTCGGCCAGGCCTGGCGGTCGTTCTGGCGCCATCCCTCGCCATGGATGA TGGCCAGCTGCATCGTGGCCTCGCTCCTCGCTCGGGTGCTGGTGGGCGGCGGAGCCTGGTGGGAGCTGCTGGTCCCGGTC GGCCTGGTCGCCACGCTGCCGGTCGTCGAGTGGGTGGTGCACGTCGGGATCCTGCACTGGCGGCCCCGCCACGTCGGCCC GGTCACGCTCGACCCGCTGCTGGCCCGCAAGCACCGTGCCCATCACGCCGACCCGCGCGCGATCCCGCTGGTGTTCATCC CGTGGCAGGTCGAGCTCTGGTTGTTCCCGTCGTACGTCGCGATCGCGTGGCTGGCGATGCCGACGACGTCGAGCGCACTC ACGCTGCTGGTCGCCGTCTACGCGATCATGTCGGGCTACGAGTGGACCCACTACCTGCTGCACAGCGACTACCGGCCGCG CTCGCGGTGGTACCGCTCGGTGTGGCGCAACCACCGGCTGCACCACTACAAGAGCGAGCACTACTGGTTCACGGTGACCA CGGCCGGCACCGCCGACCGGCTGTTCGGGACGTACCCCGACCCGGCGGCCGTCGAGACCTCGCCGACGGTCCGGGCGCTG CACTCGCGCGAGCGGCTCTGA
Upstream 100 bases:
>100_bases ATCCCGAGACGGCGCGGGCGGCGGCCGACCGGGTGCTGCGCCCGGCCACCACCAGCCTGCTCACCGCCCTCGCCGCACTG GACTCGGACCAGGAGGACTC
Downstream 100 bases:
>100_bases CCCGGCTCCGTCACGCCCGGCGGGTGACCGCGCGTGCGACGGCCGCAACCGCGGCGTCGACGCCCTCGTTGCGGCCCCAC GGGTGGCGCGCCGCACCACC
Product: fatty acid hydroxylase
Products: NA
Alternate protein names: Fatty Acid Hydroxylase-Like Protein
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MTKSQSPIASGEVERLAAQRVAADEQRITGSRRTNVSLGQAWRSFWRHPSPWMMASCIVASLLARVLVGGGAWWELLVPV GLVATLPVVEWVVHVGILHWRPRHVGPVTLDPLLARKHRAHHADPRAIPLVFIPWQVELWLFPSYVAIAWLAMPTTSSAL TLLVAVYAIMSGYEWTHYLLHSDYRPRSRWYRSVWRNHRLHHYKSEHYWFTVTTAGTADRLFGTYPDPAAVETSPTVRAL HSRERL
Sequences:
>Translated_246_residues MTKSQSPIASGEVERLAAQRVAADEQRITGSRRTNVSLGQAWRSFWRHPSPWMMASCIVASLLARVLVGGGAWWELLVPV GLVATLPVVEWVVHVGILHWRPRHVGPVTLDPLLARKHRAHHADPRAIPLVFIPWQVELWLFPSYVAIAWLAMPTTSSAL TLLVAVYAIMSGYEWTHYLLHSDYRPRSRWYRSVWRNHRLHHYKSEHYWFTVTTAGTADRLFGTYPDPAAVETSPTVRAL HSRERL >Mature_245_residues TKSQSPIASGEVERLAAQRVAADEQRITGSRRTNVSLGQAWRSFWRHPSPWMMASCIVASLLARVLVGGGAWWELLVPVG LVATLPVVEWVVHVGILHWRPRHVGPVTLDPLLARKHRAHHADPRAIPLVFIPWQVELWLFPSYVAIAWLAMPTTSSALT LLVAVYAIMSGYEWTHYLLHSDYRPRSRWYRSVWRNHRLHHYKSEHYWFTVTTAGTADRLFGTYPDPAAVETSPTVRALH SRERL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28118; Mature: 27987
Theoretical pI: Translated: 10.56; Mature: 10.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKSQSPIASGEVERLAAQRVAADEQRITGSRRTNVSLGQAWRSFWRHPSPWMMASCIVA CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHH SLLARVLVGGGAWWELLVPVGLVATLPVVEWVVHVGILHWRPRHVGPVTLDPLLARKHRA HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH HHADPRAIPLVFIPWQVELWLFPSYVAIAWLAMPTTSSALTLLVAVYAIMSGYEWTHYLL CCCCCCCEEEEEECCEEEEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHH HSDYRPRSRWYRSVWRNHRLHHYKSEHYWFTVTTAGTADRLFGTYPDPAAVETSPTVRAL HCCCCHHHHHHHHHHHCCCCCEECCCEEEEEEEECCCHHHHCCCCCCCCCCCCCHHHHHH HSRERL HHHCCC >Mature Secondary Structure TKSQSPIASGEVERLAAQRVAADEQRITGSRRTNVSLGQAWRSFWRHPSPWMMASCIVA CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHH SLLARVLVGGGAWWELLVPVGLVATLPVVEWVVHVGILHWRPRHVGPVTLDPLLARKHRA HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH HHADPRAIPLVFIPWQVELWLFPSYVAIAWLAMPTTSSALTLLVAVYAIMSGYEWTHYLL CCCCCCCEEEEEECCEEEEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHH HSDYRPRSRWYRSVWRNHRLHHYKSEHYWFTVTTAGTADRLFGTYPDPAAVETSPTVRAL HCCCCHHHHHHHHHHHCCCCCEECCCEEEEEEEECCCHHHHCCCCCCCCCCCCCHHHHHH HSRERL HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA