| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is proA
Identifier: 119387208
GI number: 119387208
Start: 1718596
End: 1719867
Strand: Direct
Name: proA
Synonym: Pden_4503
Alternate gene names: 119387208
Gene position: 1718596-1719867 (Clockwise)
Preceding gene: 119387207
Following gene: 119387210
Centisome position: 99.34
GC content: 68.55
Gene sequence:
>1272_bases ATGAAAGACCTGACCTCTTCCGATGCCGATGCGCTGATCGCGGATCTGGGGCAAAAGGCCCGCGCCGCCGCAGCCGTGCT GGCCGAGGCGAGCGCCGAGCGCAAGCATGCCGCCCTGATCGGCGCCGCCGATGCGATCCTCGAAGCCGAGGATGCCATCC TCGACGCCAATGCCGAGGACATGCATTACGCCGAGGAAAAGGGCCTTTCGCCCGCCATGCTGGACCGGCTGAAGCTCGAT CCCGCGCGCATCCGCGCCATGGCCGAGGGGCTGCGTTCGGTCGCGGCGCAGGCGGACCCGGTCGGCAAGGTGCTGGCCGA ATGGGATCGGCCGAACGGGCTGAACATCCGGCGCGTGGCCACGCCCCTGGGCGTGATCGGCGTGGTCTACGAAAGCCGGC CGAACGTCACCGCCGATGCGGCCGCACTGGCGCTGAAGGCCGGCAATGCGGTGATCCTGCGCGGCGGCTCGGAAAGCCTG AACAGCTCGGCCGCGATCCATCGGGCGCTGGTCACCGGGCTGAAGCAGGCCGGCCTGCCCGAGACGGCGATCCAGATGGT GCCGACCCGCGACCGAGAGGCGGTCGCCGCCATGCTGCGCGCGCAGGACTATATCGACGTGATCGTGCCGCGGGGCGGCA AGGGGCTGGTCGGGCTGGTGCAGAAAGAGGCCCGCGTGCCGGTCTTTGCCCATCTGGAAGGCATCTGCCACGTCTATGCC GACCGCGACGCCGACCTGGACAAGGCCCGCCGCGTGGTTCTGAACGCCAAGACGCGGCGCACCGGCATCTGCGGCGCCGC CGAATGCCTGTTGATCGACTGGCAGTTCTATACGAAACACGGTCCCGTGCTGGTCCAGGACCTGCTGGACGCAGGCGTCG AGGTGCGGGCCGAGGGCGAGCTTGCCAAGGTGCCGGGCACCGTGCCGGCCGAGCCCTCGGATTTCGGGCAGGAGTTCCTG GACAAGATCATCGCCGTCAAGCTGGTCGATGGCGTCGAAGAGGCGATCGCCCATATCCGCCGCCATGGCTCGGGCCATAC CGAATCGATCCTGACCGAAAACGACGCCACGGCCGAGCGCTTCTTCAGCGGGCTCGACAGCGCCATCCTGATGCGCAATG CCTCGACGCAATTCGCCGATGGCGGCGAGTTCGGCATGGGCGCCGAGATCGGCATCGCCACCGGCAAGATGCATGCGCGC GGGCCGGTCGGTGCCGAGCAGCTGACCAGCTTCAAGTATCTGGTCACCGGCGACGGCACCATCCGGCCCTGA
Upstream 100 bases:
>100_bases CCGCAGGAGCCTGGCAACAGAATCCTGCACCTTACCCCTTTCCATCTGGTTTTTCGGCGCGCCCGGGCCTATCTCAGGCG TCATGCAAGGGAATGCCGCC
Downstream 100 bases:
>100_bases TCGGACCAAGGCCCGAGCGGCGAAACCCGGCGGGATCCGAGCCTCAGAACGCGATCTCGCCGCCGGTCCCGTCCAGCTCC CATGCCAGCGGTCGGCCTGC
Product: gamma-glutamyl phosphate reductase
Products: NA
Alternate protein names: GPR; Glutamate-5-semialdehyde dehydrogenase; Glutamyl-gamma-semialdehyde dehydrogenase; GSA dehydrogenase
Number of amino acids: Translated: 423; Mature: 423
Protein sequence:
>423_residues MKDLTSSDADALIADLGQKARAAAAVLAEASAERKHAALIGAADAILEAEDAILDANAEDMHYAEEKGLSPAMLDRLKLD PARIRAMAEGLRSVAAQADPVGKVLAEWDRPNGLNIRRVATPLGVIGVVYESRPNVTADAAALALKAGNAVILRGGSESL NSSAAIHRALVTGLKQAGLPETAIQMVPTRDREAVAAMLRAQDYIDVIVPRGGKGLVGLVQKEARVPVFAHLEGICHVYA DRDADLDKARRVVLNAKTRRTGICGAAECLLIDWQFYTKHGPVLVQDLLDAGVEVRAEGELAKVPGTVPAEPSDFGQEFL DKIIAVKLVDGVEEAIAHIRRHGSGHTESILTENDATAERFFSGLDSAILMRNASTQFADGGEFGMGAEIGIATGKMHAR GPVGAEQLTSFKYLVTGDGTIRP
Sequences:
>Translated_423_residues MKDLTSSDADALIADLGQKARAAAAVLAEASAERKHAALIGAADAILEAEDAILDANAEDMHYAEEKGLSPAMLDRLKLD PARIRAMAEGLRSVAAQADPVGKVLAEWDRPNGLNIRRVATPLGVIGVVYESRPNVTADAAALALKAGNAVILRGGSESL NSSAAIHRALVTGLKQAGLPETAIQMVPTRDREAVAAMLRAQDYIDVIVPRGGKGLVGLVQKEARVPVFAHLEGICHVYA DRDADLDKARRVVLNAKTRRTGICGAAECLLIDWQFYTKHGPVLVQDLLDAGVEVRAEGELAKVPGTVPAEPSDFGQEFL DKIIAVKLVDGVEEAIAHIRRHGSGHTESILTENDATAERFFSGLDSAILMRNASTQFADGGEFGMGAEIGIATGKMHAR GPVGAEQLTSFKYLVTGDGTIRP >Mature_423_residues MKDLTSSDADALIADLGQKARAAAAVLAEASAERKHAALIGAADAILEAEDAILDANAEDMHYAEEKGLSPAMLDRLKLD PARIRAMAEGLRSVAAQADPVGKVLAEWDRPNGLNIRRVATPLGVIGVVYESRPNVTADAAALALKAGNAVILRGGSESL NSSAAIHRALVTGLKQAGLPETAIQMVPTRDREAVAAMLRAQDYIDVIVPRGGKGLVGLVQKEARVPVFAHLEGICHVYA DRDADLDKARRVVLNAKTRRTGICGAAECLLIDWQFYTKHGPVLVQDLLDAGVEVRAEGELAKVPGTVPAEPSDFGQEFL DKIIAVKLVDGVEEAIAHIRRHGSGHTESILTENDATAERFFSGLDSAILMRNASTQFADGGEFGMGAEIGIATGKMHAR GPVGAEQLTSFKYLVTGDGTIRP
Specific function: Catalyzes the NADPH dependent reduction of L-gamma- glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate
COG id: COG0014
COG function: function code E; Gamma-glutamyl phosphate reductase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-glutamyl phosphate reductase family
Homologues:
Organism=Homo sapiens, GI21361368, Length=406, Percent_Identity=38.6699507389163, Blast_Score=265, Evalue=6e-71, Organism=Homo sapiens, GI62912457, Length=406, Percent_Identity=38.6699507389163, Blast_Score=265, Evalue=6e-71, Organism=Escherichia coli, GI1786438, Length=416, Percent_Identity=41.8269230769231, Blast_Score=333, Evalue=2e-92, Organism=Caenorhabditis elegans, GI17569967, Length=413, Percent_Identity=39.4673123486683, Blast_Score=282, Evalue=3e-76, Organism=Caenorhabditis elegans, GI17569969, Length=413, Percent_Identity=39.4673123486683, Blast_Score=281, Evalue=3e-76, Organism=Saccharomyces cerevisiae, GI6324899, Length=428, Percent_Identity=39.2523364485981, Blast_Score=298, Evalue=1e-81, Organism=Drosophila melanogaster, GI21357643, Length=407, Percent_Identity=36.8550368550369, Blast_Score=265, Evalue=3e-71,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PROA_PARDP (A1BAM3)
Other databases:
- EMBL: CP000490 - RefSeq: YP_918263.1 - ProteinModelPortal: A1BAM3 - SMR: A1BAM3 - STRING: A1BAM3 - GeneID: 4583053 - GenomeReviews: CP000490_GR - KEGG: pde:Pden_4503 - eggNOG: COG0014 - HOGENOM: HBG318080 - OMA: GICGAME - PhylomeDB: A1BAM3 - ProtClustDB: PRK00197 - GO: GO:0005737 - HAMAP: MF_00412 - InterPro: IPR016161 - InterPro: IPR016163 - InterPro: IPR016162 - InterPro: IPR015590 - InterPro: IPR000965 - InterPro: IPR020593 - InterPro: IPR012134 - Gene3D: G3DSA:3.40.309.10 - Gene3D: G3DSA:3.40.605.10 - PANTHER: PTHR11063:SF1 - PIRSF: PIRSF000151 - TIGRFAMs: TIGR00407
Pfam domain/function: PF00171 Aldedh; SSF53720 Aldehyde_DH/Histidinol_DH
EC number: =1.2.1.41
Molecular weight: Translated: 44707; Mature: 44707
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: PS01223 PROA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDLTSSDADALIADLGQKARAAAAVLAEASAERKHAALIGAADAILEAEDAILDANAED CCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH MHYAEEKGLSPAMLDRLKLDPARIRAMAEGLRSVAAQADPVGKVLAEWDRPNGLNIRRVA HHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEHHHH TPLGVIGVVYESRPNVTADAAALALKAGNAVILRGGSESLNSSAAIHRALVTGLKQAGLP CCHHEEEEEEECCCCCCHHHHHHEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCC ETAIQMVPTRDREAVAAMLRAQDYIDVIVPRGGKGLVGLVQKEARVPVFAHLEGICHVYA HHHHHHCCCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHEEC DRDADLDKARRVVLNAKTRRTGICGAAECLLIDWQFYTKHGPVLVQDLLDAGVEVRAEGE CCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHCCCEEEECCC LAKVPGTVPAEPSDFGQEFLDKIIAVKLVDGVEEAIAHIRRHGSGHTESILTENDATAER EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHH FFSGLDSAILMRNASTQFADGGEFGMGAEIGIATGKMHARGPVGAEQLTSFKYLVTGDGT HHHCCCHHHEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHCCEEEEEECCCC IRP CCC >Mature Secondary Structure MKDLTSSDADALIADLGQKARAAAAVLAEASAERKHAALIGAADAILEAEDAILDANAED CCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH MHYAEEKGLSPAMLDRLKLDPARIRAMAEGLRSVAAQADPVGKVLAEWDRPNGLNIRRVA HHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEHHHH TPLGVIGVVYESRPNVTADAAALALKAGNAVILRGGSESLNSSAAIHRALVTGLKQAGLP CCHHEEEEEEECCCCCCHHHHHHEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCC ETAIQMVPTRDREAVAAMLRAQDYIDVIVPRGGKGLVGLVQKEARVPVFAHLEGICHVYA HHHHHHCCCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHEEC DRDADLDKARRVVLNAKTRRTGICGAAECLLIDWQFYTKHGPVLVQDLLDAGVEVRAEGE CCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHCCCEEEECCC LAKVPGTVPAEPSDFGQEFLDKIIAVKLVDGVEEAIAHIRRHGSGHTESILTENDATAER EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHH FFSGLDSAILMRNASTQFADGGEFGMGAEIGIATGKMHARGPVGAEQLTSFKYLVTGDGT HHHCCCHHHEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHCCEEEEEECCCC IRP CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA