Definition Paracoccus denitrificans PD1222 chromosome 2, complete sequence.
Accession NC_008687
Length 1,730,097

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The map label for this gene is ygcG [H]

Identifier: 119387206

GI number: 119387206

Start: 1715930

End: 1716865

Strand: Direct

Name: ygcG [H]

Synonym: Pden_4501

Alternate gene names: 119387206

Gene position: 1715930-1716865 (Clockwise)

Preceding gene: 119387205

Following gene: 119387207

Centisome position: 99.18

GC content: 72.12

Gene sequence:

>936_bases
ATGGTTAGGCTGCCCAGGACCGCCCCACCCCCCAGGCTTCGGGCCGCCCGGGCACCGGCCTTGCTGTTCACGCTCCTCTG
GCTGGCGCTGGTGGTGCCGATCCATGCGCAGACCCTGCCCGACTGGCAGGACCTGCGCGTGAACGATTTCGCCGGGCTGC
TCACGCCCGAGGATGCGCAGGCATTGGACACGGCGCTCAGCACCCTCGACGCCCAGACCGGCATCGAGGGCACCGTCGTC
ACCCTGACCGACCGGGCGCGCTACGGCGGAACCGACGGGCTGGAGGCCTTTGCCACAAGGCTCTTCGACCATTGGGGCGT
GGGCGACGGCACGCGCAACGACGGCTTCATGGTTCTGGTACTGGCCGATGACCGCGAGGCACGGATCGAGCTTGGCCGCG
GCTACGAAAACGACGCCGACATCCTGGCGCAAGAGATCATGCGCAACACCATGCTGCCCGCCCTCCGCGACGGCCGGATG
TCGCGCGGCATCCGCGACGGAACCCAGGCGGTGATCGAGCTGATCGCCCGGCCGGTGGCGGCGGGCCAGCCGCTCCGGGC
GCCCGAACGCGGAATGATGGACCGGATCGTCCCCTTCCTCTTCGGCGGCGCGTGGCTCCTGATCCTCGGTGCCATCGCGC
GGCAACTCTGGCGCCGCAACCGCTGCCCGCAATGCGGCCGTCGCGGCCTGGAAACGCGGGTCGCACCCCTGGAAACCCCG
CTGCCCGAGGGCGGCCACATGGTCTCGCACGACGATGTCACGAGGCGCTGCCCTGCCTGCGGCTGGTCGGAAACCCGCCA
GCGCCTGCGCCGGCAAACGGTCTGGTATGGCCCGAACGGCGCCGTGCTGCGCAGCAAGGCCAACCGGGCCGCAGGCGGCG
CCCCGGGCTTCGGCGGCGGCTCGTCGCGGGGCGGCGGCGCCTCGGGGCGCTGGTAG

Upstream 100 bases:

>100_bases
GTTCGCCGGCCGCGACGACGACGTGATCGGCCAGCCCGACCCGCAAATCACCGGCGGCCCCGAGATCCTGCCGGGATAAT
AGGCCAGGCAAGGAGCGATC

Downstream 100 bases:

>100_bases
GCGCGGCCGCGCTTGCGAGGATGCGGCGAGGCGGCTAGCGTCATGCCAGACTGCCTCAAGGAAAGCTCCGACATGAAACC
TCTTCGCTTCCCCGCCCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MVRLPRTAPPPRLRAARAPALLFTLLWLALVVPIHAQTLPDWQDLRVNDFAGLLTPEDAQALDTALSTLDAQTGIEGTVV
TLTDRARYGGTDGLEAFATRLFDHWGVGDGTRNDGFMVLVLADDREARIELGRGYENDADILAQEIMRNTMLPALRDGRM
SRGIRDGTQAVIELIARPVAAGQPLRAPERGMMDRIVPFLFGGAWLLILGAIARQLWRRNRCPQCGRRGLETRVAPLETP
LPEGGHMVSHDDVTRRCPACGWSETRQRLRRQTVWYGPNGAVLRSKANRAAGGAPGFGGGSSRGGGASGRW

Sequences:

>Translated_311_residues
MVRLPRTAPPPRLRAARAPALLFTLLWLALVVPIHAQTLPDWQDLRVNDFAGLLTPEDAQALDTALSTLDAQTGIEGTVV
TLTDRARYGGTDGLEAFATRLFDHWGVGDGTRNDGFMVLVLADDREARIELGRGYENDADILAQEIMRNTMLPALRDGRM
SRGIRDGTQAVIELIARPVAAGQPLRAPERGMMDRIVPFLFGGAWLLILGAIARQLWRRNRCPQCGRRGLETRVAPLETP
LPEGGHMVSHDDVTRRCPACGWSETRQRLRRQTVWYGPNGAVLRSKANRAAGGAPGFGGGSSRGGGASGRW
>Mature_311_residues
MVRLPRTAPPPRLRAARAPALLFTLLWLALVVPIHAQTLPDWQDLRVNDFAGLLTPEDAQALDTALSTLDAQTGIEGTVV
TLTDRARYGGTDGLEAFATRLFDHWGVGDGTRNDGFMVLVLADDREARIELGRGYENDADILAQEIMRNTMLPALRDGRM
SRGIRDGTQAVIELIARPVAAGQPLRAPERGMMDRIVPFLFGGAWLLILGAIARQLWRRNRCPQCGRRGLETRVAPLETP
LPEGGHMVSHDDVTRRCPACGWSETRQRLRRQTVWYGPNGAVLRSKANRAAGGAPGFGGGSSRGGGASGRW

Specific function: Unknown

COG id: COG1512

COG function: function code R; Beta-propeller domains of methanol dehydrogenase type

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0603 family [H]

Homologues:

Organism=Escherichia coli, GI87082161, Length=156, Percent_Identity=28.8461538461538, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007621 [H]

Pfam domain/function: PF04536 DUF477 [H]

EC number: NA

Molecular weight: Translated: 33928; Mature: 33928

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRLPRTAPPPRLRAARAPALLFTLLWLALVVPIHAQTLPDWQDLRVNDFAGLLTPEDAQ
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHCCCCCCHHH
ALDTALSTLDAQTGIEGTVVTLTDRARYGGTDGLEAFATRLFDHWGVGDGTRNDGFMVLV
HHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEE
LADDREARIELGRGYENDADILAQEIMRNTMLPALRDGRMSRGIRDGTQAVIELIARPVA
EECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
AGQPLRAPERGMMDRIVPFLFGGAWLLILGAIARQLWRRNRCPQCGRRGLETRVAPLETP
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHCCCCCCCC
LPEGGHMVSHDDVTRRCPACGWSETRQRLRRQTVWYGPNGAVLRSKANRAAGGAPGFGGG
CCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHCEEECCCCCEEECCCCCCCCCCCCCCCC
SSRGGGASGRW
CCCCCCCCCCC
>Mature Secondary Structure
MVRLPRTAPPPRLRAARAPALLFTLLWLALVVPIHAQTLPDWQDLRVNDFAGLLTPEDAQ
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHCCCCCCHHH
ALDTALSTLDAQTGIEGTVVTLTDRARYGGTDGLEAFATRLFDHWGVGDGTRNDGFMVLV
HHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEE
LADDREARIELGRGYENDADILAQEIMRNTMLPALRDGRMSRGIRDGTQAVIELIARPVA
EECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
AGQPLRAPERGMMDRIVPFLFGGAWLLILGAIARQLWRRNRCPQCGRRGLETRVAPLETP
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHCCCCCCCC
LPEGGHMVSHDDVTRRCPACGWSETRQRLRRQTVWYGPNGAVLRSKANRAAGGAPGFGGG
CCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHCEEECCCCCEEECCCCCCCCCCCCCCCC
SSRGGGASGRW
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]