| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is ygcG [H]
Identifier: 119387206
GI number: 119387206
Start: 1715930
End: 1716865
Strand: Direct
Name: ygcG [H]
Synonym: Pden_4501
Alternate gene names: 119387206
Gene position: 1715930-1716865 (Clockwise)
Preceding gene: 119387205
Following gene: 119387207
Centisome position: 99.18
GC content: 72.12
Gene sequence:
>936_bases ATGGTTAGGCTGCCCAGGACCGCCCCACCCCCCAGGCTTCGGGCCGCCCGGGCACCGGCCTTGCTGTTCACGCTCCTCTG GCTGGCGCTGGTGGTGCCGATCCATGCGCAGACCCTGCCCGACTGGCAGGACCTGCGCGTGAACGATTTCGCCGGGCTGC TCACGCCCGAGGATGCGCAGGCATTGGACACGGCGCTCAGCACCCTCGACGCCCAGACCGGCATCGAGGGCACCGTCGTC ACCCTGACCGACCGGGCGCGCTACGGCGGAACCGACGGGCTGGAGGCCTTTGCCACAAGGCTCTTCGACCATTGGGGCGT GGGCGACGGCACGCGCAACGACGGCTTCATGGTTCTGGTACTGGCCGATGACCGCGAGGCACGGATCGAGCTTGGCCGCG GCTACGAAAACGACGCCGACATCCTGGCGCAAGAGATCATGCGCAACACCATGCTGCCCGCCCTCCGCGACGGCCGGATG TCGCGCGGCATCCGCGACGGAACCCAGGCGGTGATCGAGCTGATCGCCCGGCCGGTGGCGGCGGGCCAGCCGCTCCGGGC GCCCGAACGCGGAATGATGGACCGGATCGTCCCCTTCCTCTTCGGCGGCGCGTGGCTCCTGATCCTCGGTGCCATCGCGC GGCAACTCTGGCGCCGCAACCGCTGCCCGCAATGCGGCCGTCGCGGCCTGGAAACGCGGGTCGCACCCCTGGAAACCCCG CTGCCCGAGGGCGGCCACATGGTCTCGCACGACGATGTCACGAGGCGCTGCCCTGCCTGCGGCTGGTCGGAAACCCGCCA GCGCCTGCGCCGGCAAACGGTCTGGTATGGCCCGAACGGCGCCGTGCTGCGCAGCAAGGCCAACCGGGCCGCAGGCGGCG CCCCGGGCTTCGGCGGCGGCTCGTCGCGGGGCGGCGGCGCCTCGGGGCGCTGGTAG
Upstream 100 bases:
>100_bases GTTCGCCGGCCGCGACGACGACGTGATCGGCCAGCCCGACCCGCAAATCACCGGCGGCCCCGAGATCCTGCCGGGATAAT AGGCCAGGCAAGGAGCGATC
Downstream 100 bases:
>100_bases GCGCGGCCGCGCTTGCGAGGATGCGGCGAGGCGGCTAGCGTCATGCCAGACTGCCTCAAGGAAAGCTCCGACATGAAACC TCTTCGCTTCCCCGCCCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 311; Mature: 311
Protein sequence:
>311_residues MVRLPRTAPPPRLRAARAPALLFTLLWLALVVPIHAQTLPDWQDLRVNDFAGLLTPEDAQALDTALSTLDAQTGIEGTVV TLTDRARYGGTDGLEAFATRLFDHWGVGDGTRNDGFMVLVLADDREARIELGRGYENDADILAQEIMRNTMLPALRDGRM SRGIRDGTQAVIELIARPVAAGQPLRAPERGMMDRIVPFLFGGAWLLILGAIARQLWRRNRCPQCGRRGLETRVAPLETP LPEGGHMVSHDDVTRRCPACGWSETRQRLRRQTVWYGPNGAVLRSKANRAAGGAPGFGGGSSRGGGASGRW
Sequences:
>Translated_311_residues MVRLPRTAPPPRLRAARAPALLFTLLWLALVVPIHAQTLPDWQDLRVNDFAGLLTPEDAQALDTALSTLDAQTGIEGTVV TLTDRARYGGTDGLEAFATRLFDHWGVGDGTRNDGFMVLVLADDREARIELGRGYENDADILAQEIMRNTMLPALRDGRM SRGIRDGTQAVIELIARPVAAGQPLRAPERGMMDRIVPFLFGGAWLLILGAIARQLWRRNRCPQCGRRGLETRVAPLETP LPEGGHMVSHDDVTRRCPACGWSETRQRLRRQTVWYGPNGAVLRSKANRAAGGAPGFGGGSSRGGGASGRW >Mature_311_residues MVRLPRTAPPPRLRAARAPALLFTLLWLALVVPIHAQTLPDWQDLRVNDFAGLLTPEDAQALDTALSTLDAQTGIEGTVV TLTDRARYGGTDGLEAFATRLFDHWGVGDGTRNDGFMVLVLADDREARIELGRGYENDADILAQEIMRNTMLPALRDGRM SRGIRDGTQAVIELIARPVAAGQPLRAPERGMMDRIVPFLFGGAWLLILGAIARQLWRRNRCPQCGRRGLETRVAPLETP LPEGGHMVSHDDVTRRCPACGWSETRQRLRRQTVWYGPNGAVLRSKANRAAGGAPGFGGGSSRGGGASGRW
Specific function: Unknown
COG id: COG1512
COG function: function code R; Beta-propeller domains of methanol dehydrogenase type
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0603 family [H]
Homologues:
Organism=Escherichia coli, GI87082161, Length=156, Percent_Identity=28.8461538461538, Blast_Score=77, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007621 [H]
Pfam domain/function: PF04536 DUF477 [H]
EC number: NA
Molecular weight: Translated: 33928; Mature: 33928
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRLPRTAPPPRLRAARAPALLFTLLWLALVVPIHAQTLPDWQDLRVNDFAGLLTPEDAQ CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHCCCCCCHHH ALDTALSTLDAQTGIEGTVVTLTDRARYGGTDGLEAFATRLFDHWGVGDGTRNDGFMVLV HHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEE LADDREARIELGRGYENDADILAQEIMRNTMLPALRDGRMSRGIRDGTQAVIELIARPVA EECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH AGQPLRAPERGMMDRIVPFLFGGAWLLILGAIARQLWRRNRCPQCGRRGLETRVAPLETP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHCCCCCCCC LPEGGHMVSHDDVTRRCPACGWSETRQRLRRQTVWYGPNGAVLRSKANRAAGGAPGFGGG CCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHCEEECCCCCEEECCCCCCCCCCCCCCCC SSRGGGASGRW CCCCCCCCCCC >Mature Secondary Structure MVRLPRTAPPPRLRAARAPALLFTLLWLALVVPIHAQTLPDWQDLRVNDFAGLLTPEDAQ CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHCCCCCCHHH ALDTALSTLDAQTGIEGTVVTLTDRARYGGTDGLEAFATRLFDHWGVGDGTRNDGFMVLV HHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEE LADDREARIELGRGYENDADILAQEIMRNTMLPALRDGRMSRGIRDGTQAVIELIARPVA EECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH AGQPLRAPERGMMDRIVPFLFGGAWLLILGAIARQLWRRNRCPQCGRRGLETRVAPLETP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHCCCCCCCC LPEGGHMVSHDDVTRRCPACGWSETRQRLRRQTVWYGPNGAVLRSKANRAAGGAPGFGGG CCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHCEEECCCCCEEECCCCCCCCCCCCCCCC SSRGGGASGRW CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]