Click here to switch to the map view.

The map label for this gene is yiiM [H]

Identifier: 119387161

GI number: 119387161

Start: 1667596

End: 1668348

Strand: Direct

Name: yiiM [H]

Synonym: Pden_4456

Alternate gene names: 119387161

Gene position: 1667596-1668348 (Clockwise)

Preceding gene: 119387153

Following gene: 119387162

Centisome position: 96.39

GC content: 69.46

Gene sequence:

>753_bases
ATGGCGGAGATCATCCTGTTGACGGGCAAGGCCGCCCCGCTGCCCGGAAGCGACCAGAAAAGCGGCATCGACAAGCGCCC
GGTGGATCGCCCGCTGGCCCTTGGTCCCGAGGGGTTTTCGGGCGACGAGCAGGCCGACCGCCGCGTGCATGGCGGGCCGG
AAAAGGCCGTGCATCACTATCCCTTCGACCATTATGCGGCGTGGCGCGAAGAGCTTGGGCTGCTGCGCCCGGCGGAACCG
CCGGGGGTTTCACACCCCCGGACCCCCGTGGAGTATTTGGAGAACAGAGAAATCAGGGGGTTGCTGGATGCGCCCGGCGC
CTTTGGCGAGAACATCTCGACCCGGGGGCTGACCGAGGCGGATGTGGCGGTGGGCGACATCTTCCGGCTCGGTTCCGCCC
TGGTGCAGGTGTCGCAGGGGCGCCAGCCCTGCTGGAAGCTGAACCGCCGCTTCGGGGTCGAAACCATGGCGCGACGCGTT
CAGGAGAGCGGCCGCACCGGCTGGTACTACCGCGTGCTGGAGCCGGGGATCGTCGCGCCCGGCGACCGGCTGGAACTGGT
CGACCGCGTGGCACCGGACTGGACGCTGCGCCGGCTTTGGCATGCGCTCTACGTGGACCGGCTGAACCTTGGCGAGTTGC
AGGGCATCGCCGCGCTGGACATCCTGGCCGAGGGCTGGCGGCGCTATGCCGTCCGCCGGCTGGAAAGCGGCCGGGTCGAG
GACTGGTCGAAGCGGCTGGAGGGCAGCGCATGA

Upstream 100 bases:

>100_bases
TGGTTCGGGCGGCGCCATGGCCGCCCGGCCCCCGTCCCGCTCCCTTGAGCCTGCCGGGGCTTTGGCTAATCTGGGTGCGA
CGCGCGAACAGAGGGAAGCC

Downstream 100 bases:

>100_bases
CCCGCCCGCTGGTGATCTCGATCCAGAGCCAGGTGGTCATGGGTCATGTCGGCAATTCGGCGGCGGTGTTCCCGATGCTG
GCAGCAGGGCTGGAGGTGGC

Product: MOSC domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MAEIILLTGKAAPLPGSDQKSGIDKRPVDRPLALGPEGFSGDEQADRRVHGGPEKAVHHYPFDHYAAWREELGLLRPAEP
PGVSHPRTPVEYLENREIRGLLDAPGAFGENISTRGLTEADVAVGDIFRLGSALVQVSQGRQPCWKLNRRFGVETMARRV
QESGRTGWYYRVLEPGIVAPGDRLELVDRVAPDWTLRRLWHALYVDRLNLGELQGIAALDILAEGWRRYAVRRLESGRVE
DWSKRLEGSA

Sequences:

>Translated_250_residues
MAEIILLTGKAAPLPGSDQKSGIDKRPVDRPLALGPEGFSGDEQADRRVHGGPEKAVHHYPFDHYAAWREELGLLRPAEP
PGVSHPRTPVEYLENREIRGLLDAPGAFGENISTRGLTEADVAVGDIFRLGSALVQVSQGRQPCWKLNRRFGVETMARRV
QESGRTGWYYRVLEPGIVAPGDRLELVDRVAPDWTLRRLWHALYVDRLNLGELQGIAALDILAEGWRRYAVRRLESGRVE
DWSKRLEGSA
>Mature_249_residues
AEIILLTGKAAPLPGSDQKSGIDKRPVDRPLALGPEGFSGDEQADRRVHGGPEKAVHHYPFDHYAAWREELGLLRPAEPP
GVSHPRTPVEYLENREIRGLLDAPGAFGENISTRGLTEADVAVGDIFRLGSALVQVSQGRQPCWKLNRRFGVETMARRVQ
ESGRTGWYYRVLEPGIVAPGDRLELVDRVAPDWTLRRLWHALYVDRLNLGELQGIAALDILAEGWRRYAVRRLESGRVED
WSKRLEGSA

Specific function: Unknown

COG id: COG2258

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 MOSC domain [H]

Homologues:

Organism=Escherichia coli, GI87082350, Length=249, Percent_Identity=39.3574297188755, Blast_Score=155, Evalue=2e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005163
- InterPro:   IPR005302
- InterPro:   IPR015808
- InterPro:   IPR011037 [H]

Pfam domain/function: PF03475 3-alpha; PF03473 MOSC [H]

EC number: NA

Molecular weight: Translated: 27941; Mature: 27810

Theoretical pI: Translated: 7.17; Mature: 7.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEIILLTGKAAPLPGSDQKSGIDKRPVDRPLALGPEGFSGDEQADRRVHGGPEKAVHHY
CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHCCC
PFDHYAAWREELGLLRPAEPPGVSHPRTPVEYLENREIRGLLDAPGAFGENISTRGLTEA
CCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCHH
DVAVGDIFRLGSALVQVSQGRQPCWKLNRRFGVETMARRVQESGRTGWYYRVLEPGIVAP
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEECCCCCCC
GDRLELVDRVAPDWTLRRLWHALYVDRLNLGELQGIAALDILAEGWRRYAVRRLESGRVE
CHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
DWSKRLEGSA
HHHHHCCCCC
>Mature Secondary Structure 
AEIILLTGKAAPLPGSDQKSGIDKRPVDRPLALGPEGFSGDEQADRRVHGGPEKAVHHY
CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHCCC
PFDHYAAWREELGLLRPAEPPGVSHPRTPVEYLENREIRGLLDAPGAFGENISTRGLTEA
CCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCHH
DVAVGDIFRLGSALVQVSQGRQPCWKLNRRFGVETMARRVQESGRTGWYYRVLEPGIVAP
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEECCCCCCC
GDRLELVDRVAPDWTLRRLWHALYVDRLNLGELQGIAALDILAEGWRRYAVRRLESGRVE
CHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
DWSKRLEGSA
HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8346018; 9278503 [H]