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The map label for this gene is hmuS [H]

Identifier: 119386907

GI number: 119386907

Start: 1362333

End: 1363373

Strand: Direct

Name: hmuS [H]

Synonym: Pden_4202

Alternate gene names: 119386907

Gene position: 1362333-1363373 (Clockwise)

Preceding gene: 119386905

Following gene: 119386908

Centisome position: 78.74

GC content: 70.51

Gene sequence:

>1041_bases
ATGACCGACCATTCCCCCGCAGAGCTGCGCCGCATCCTGGCCGAGGACGGCGGCCGCCCCTTCGACCTAGCCGAACGGCT
GGGCGTCCCCGAGGCGGCGCTGGTTGCGGCCCGGATCGGCCACGGCACCACCCGCATCGACCCGCTGCCCGGCCGGCTGA
TCCCGCGGGTGCAGGCACTGGGCGAGGTCATGGCGCTGACCCGCAACCGCTCTTGCGTGATCGAGAAGATCGGCACCTAC
AACGACTTCCACGACGGCGAACATGCCGCCATGACCGTGGACCCCGAGATCGACCTGCGCATCTTTCCGCGCCATTGGGT
CCATGCCTTCGCCGTCGAGCAAGAGGCCGAGACGGGCACGCGCCGCTCGATCCAGGTCTTCGACGCGGCGGGCGATGCGG
TCCACAAGATCCACCTGCGCGAGGGCTCGGACCTGCCGGCCTGGGAGGCGCTGAAGCGCGACCTGGCGCTGCCGGACCAG
TCGGACACCGCCAGCTTCGAGCCCCGCGCGCCGGTCGAGCCGCCAAGGGCCGGCGCCGAGCGCGCCGATGCGCTGCGCCG
GGAATGGGCGGCGATGACCGATACGCATCAGTTCAACATCCTGATCCGGCGGCTCAAGATGAACCGGCTGGGCGCCTATC
GCATCGCCGGCGCGCCCCTGGTGCGGCCGCTGGCGGTCGAGGCGGTGCCGGCGCTTCTGGAGCGCGTCCATGCCGGGGGC
GTGGGCGTGATGTTCTTCGTCGGCAACATGGGCTGCATCGAGATCCATTCCGGCAAGGTCCATTCGCTCAGGCCCATGGG
GCCGTGGCTGAACGTGATGGACCCGCGCTTCAACCTGCACCTGCGCGGCGATCATGTCGCCGAGGTCTGGGCGGTGGACA
AGCCCACCAAGCGCGGCCCGGCCATCTCGGTCGAGGCGTTCGACGCCGAGGGGGCGCTGATCTTCCAATGCTTCGGGCTG
CGCCCGGAAAAGGGCGGGAATGCCGAGCAATGGGCGACGCTGGTCGCCGACCTGCCGGCGCTGGCAGAGGCGGCGGAATG
A

Upstream 100 bases:

>100_bases
AAGTAAAATATTCTTAGTAAAACTGTCAATGATTCCTTGCGCCCTGACTGGAACCGAACAGGGCCGAGGCCGGCGCGCAA
CAGCAATGAAGGACACCGCG

Downstream 100 bases:

>100_bases
AACGGCTGGCCCTTGCCCTGATCCTGCTGGCGGGCACCGCCGGCGCCGAGACCTATCCCGAGGCCCGGCGCGTGCTGTCG
CTGGGCGGCTCGGTGACCGA

Product: hemin-degrading family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 345

Protein sequence:

>346_residues
MTDHSPAELRRILAEDGGRPFDLAERLGVPEAALVAARIGHGTTRIDPLPGRLIPRVQALGEVMALTRNRSCVIEKIGTY
NDFHDGEHAAMTVDPEIDLRIFPRHWVHAFAVEQEAETGTRRSIQVFDAAGDAVHKIHLREGSDLPAWEALKRDLALPDQ
SDTASFEPRAPVEPPRAGAERADALRREWAAMTDTHQFNILIRRLKMNRLGAYRIAGAPLVRPLAVEAVPALLERVHAGG
VGVMFFVGNMGCIEIHSGKVHSLRPMGPWLNVMDPRFNLHLRGDHVAEVWAVDKPTKRGPAISVEAFDAEGALIFQCFGL
RPEKGGNAEQWATLVADLPALAEAAE

Sequences:

>Translated_346_residues
MTDHSPAELRRILAEDGGRPFDLAERLGVPEAALVAARIGHGTTRIDPLPGRLIPRVQALGEVMALTRNRSCVIEKIGTY
NDFHDGEHAAMTVDPEIDLRIFPRHWVHAFAVEQEAETGTRRSIQVFDAAGDAVHKIHLREGSDLPAWEALKRDLALPDQ
SDTASFEPRAPVEPPRAGAERADALRREWAAMTDTHQFNILIRRLKMNRLGAYRIAGAPLVRPLAVEAVPALLERVHAGG
VGVMFFVGNMGCIEIHSGKVHSLRPMGPWLNVMDPRFNLHLRGDHVAEVWAVDKPTKRGPAISVEAFDAEGALIFQCFGL
RPEKGGNAEQWATLVADLPALAEAAE
>Mature_345_residues
TDHSPAELRRILAEDGGRPFDLAERLGVPEAALVAARIGHGTTRIDPLPGRLIPRVQALGEVMALTRNRSCVIEKIGTYN
DFHDGEHAAMTVDPEIDLRIFPRHWVHAFAVEQEAETGTRRSIQVFDAAGDAVHKIHLREGSDLPAWEALKRDLALPDQS
DTASFEPRAPVEPPRAGAERADALRREWAAMTDTHQFNILIRRLKMNRLGAYRIAGAPLVRPLAVEAVPALLERVHAGGV
GVMFFVGNMGCIEIHSGKVHSLRPMGPWLNVMDPRFNLHLRGDHVAEVWAVDKPTKRGPAISVEAFDAEGALIFQCFGLR
PEKGGNAEQWATLVADLPALAEAAE

Specific function: Part of the binding-protein-dependent transport system for hemin [H]

COG id: COG3720

COG function: function code P; Putative heme degradation protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To Y.enterocolitica hemS [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007845 [H]

Pfam domain/function: PF05171 HemS [H]

EC number: NA

Molecular weight: Translated: 37983; Mature: 37852

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDHSPAELRRILAEDGGRPFDLAERLGVPEAALVAARIGHGTTRIDPLPGRLIPRVQAL
CCCCCHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
GEVMALTRNRSCVIEKIGTYNDFHDGEHAAMTVDPEIDLRIFPRHWVHAFAVEQEAETGT
HHHHHHHCCCCEEEHHHCCCCCCCCCCCEEEEECCCCCEEECCHHHHHHHHHHHHHCCCC
RRSIQVFDAAGDAVHKIHLREGSDLPAWEALKRDLALPDQSDTASFEPRAPVEPPRAGAE
CCEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHH
RADALRREWAAMTDTHQFNILIRRLKMNRLGAYRIAGAPLVRPLAVEAVPALLERVHAGG
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHCCC
VGVMFFVGNMGCIEIHSGKVHSLRPMGPWLNVMDPRFNLHLRGDHVAEVWAVDKPTKRGP
EEEEEEECCCCEEEEECCCCCEECCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCC
AISVEAFDAEGALIFQCFGLRPEKGGNAEQWATLVADLPALAEAAE
EEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TDHSPAELRRILAEDGGRPFDLAERLGVPEAALVAARIGHGTTRIDPLPGRLIPRVQAL
CCCCHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
GEVMALTRNRSCVIEKIGTYNDFHDGEHAAMTVDPEIDLRIFPRHWVHAFAVEQEAETGT
HHHHHHHCCCCEEEHHHCCCCCCCCCCCEEEEECCCCCEEECCHHHHHHHHHHHHHCCCC
RRSIQVFDAAGDAVHKIHLREGSDLPAWEALKRDLALPDQSDTASFEPRAPVEPPRAGAE
CCEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHH
RADALRREWAAMTDTHQFNILIRRLKMNRLGAYRIAGAPLVRPLAVEAVPALLERVHAGG
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHCCC
VGVMFFVGNMGCIEIHSGKVHSLRPMGPWLNVMDPRFNLHLRGDHVAEVWAVDKPTKRGP
EEEEEEECCCCEEEEECCCCCEECCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCC
AISVEAFDAEGALIFQCFGLRPEKGGNAEQWATLVADLPALAEAAE
EEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9026634; 11586360; 12142430 [H]