| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is 119386857
Identifier: 119386857
GI number: 119386857
Start: 1308359
End: 1308688
Strand: Direct
Name: 119386857
Synonym: Pden_4152
Alternate gene names: NA
Gene position: 1308359-1308688 (Clockwise)
Preceding gene: 119386856
Following gene: 119386858
Centisome position: 75.62
GC content: 59.7
Gene sequence:
>330_bases ATGGCAGATGATGCAAAGCCCCGCGTGAAGGTTCCGAAATCGGCCAAGGCCGGCGAAACCGTGACCATCAAGGCGCTGAT CTCGCACAAGATGGAATCGGGCCAGCGCAAGGATGCCGAGGGCAAGCTGATCCCGCGCTCGATCATCAACCGCTTCACCT GCGACCTGAACGGGGTGAACGTGGTGGACGTGGCGATCGACCCGGCGGTCTCGACCAATCCCTATTTCGAATTCGACGCC AAGGTCGATGCGGCGGGCGAGTTCAAGTTCACATGGTATGACGACGACGGCTCCGTCTACGAAGACGTGAAGCCGATCGA AGTCTCGTAG
Upstream 100 bases:
>100_bases GCTGGCCAAGATGGGCGACGGCTCGGTCGTCAGGGCGCAGACCACGGTCAAGGTCACCATCGGCGGCTGCGGCGGCTGAA TCCAGCAACAGGAGATTACG
Downstream 100 bases:
>100_bases GCGCCGCAACAGGTCCAGATCCAGGGAGGAGACGCCATGCCGCGCTTTACCAAGACAAAAGGCACCTTGGCCGCCACGGC CCTTGGCCTCGCCCTTGCGG
Product: sulfur oxidation Z protein
Products: NA
Alternate protein names: Sulphur Oxidation Protein SoxZ; Sulfur Oxidation Z Protein; Sulfur Oxidation Protein; Sulfur Compound Chelating Protein SoxZ; Sulphur Oxidation Protein; Chain E Soxyz Complex
Number of amino acids: Translated: 109; Mature: 108
Protein sequence:
>109_residues MADDAKPRVKVPKSAKAGETVTIKALISHKMESGQRKDAEGKLIPRSIINRFTCDLNGVNVVDVAIDPAVSTNPYFEFDA KVDAAGEFKFTWYDDDGSVYEDVKPIEVS
Sequences:
>Translated_109_residues MADDAKPRVKVPKSAKAGETVTIKALISHKMESGQRKDAEGKLIPRSIINRFTCDLNGVNVVDVAIDPAVSTNPYFEFDA KVDAAGEFKFTWYDDDGSVYEDVKPIEVS >Mature_108_residues ADDAKPRVKVPKSAKAGETVTIKALISHKMESGQRKDAEGKLIPRSIINRFTCDLNGVNVVDVAIDPAVSTNPYFEFDAK VDAAGEFKFTWYDDDGSVYEDVKPIEVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11980; Mature: 11848
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADDAKPRVKVPKSAKAGETVTIKALISHKMESGQRKDAEGKLIPRSIINRFTCDLNGVN CCCCCCCCEECCCCCCCCCEEEEHHHHHHHHCCCCCCCCCCCCCCHHHHHHEECCCCCCE VVDVAIDPAVSTNPYFEFDAKVDAAGEFKFTWYDDDGSVYEDVKPIEVS EEEEEECCCCCCCCCEEECCCCCCCCCEEEEEECCCCCCCCCCEEEECC >Mature Secondary Structure ADDAKPRVKVPKSAKAGETVTIKALISHKMESGQRKDAEGKLIPRSIINRFTCDLNGVN CCCCCCCEECCCCCCCCCEEEEHHHHHHHHCCCCCCCCCCCCCCHHHHHHEECCCCCCE VVDVAIDPAVSTNPYFEFDAKVDAAGEFKFTWYDDDGSVYEDVKPIEVS EEEEEECCCCCCCCCEEECCCCCCCCCEEEEEECCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA