Definition Paracoccus denitrificans PD1222 chromosome 2, complete sequence.
Accession NC_008687
Length 1,730,097

Click here to switch to the map view.

The map label for this gene is 119386857

Identifier: 119386857

GI number: 119386857

Start: 1308359

End: 1308688

Strand: Direct

Name: 119386857

Synonym: Pden_4152

Alternate gene names: NA

Gene position: 1308359-1308688 (Clockwise)

Preceding gene: 119386856

Following gene: 119386858

Centisome position: 75.62

GC content: 59.7

Gene sequence:

>330_bases
ATGGCAGATGATGCAAAGCCCCGCGTGAAGGTTCCGAAATCGGCCAAGGCCGGCGAAACCGTGACCATCAAGGCGCTGAT
CTCGCACAAGATGGAATCGGGCCAGCGCAAGGATGCCGAGGGCAAGCTGATCCCGCGCTCGATCATCAACCGCTTCACCT
GCGACCTGAACGGGGTGAACGTGGTGGACGTGGCGATCGACCCGGCGGTCTCGACCAATCCCTATTTCGAATTCGACGCC
AAGGTCGATGCGGCGGGCGAGTTCAAGTTCACATGGTATGACGACGACGGCTCCGTCTACGAAGACGTGAAGCCGATCGA
AGTCTCGTAG

Upstream 100 bases:

>100_bases
GCTGGCCAAGATGGGCGACGGCTCGGTCGTCAGGGCGCAGACCACGGTCAAGGTCACCATCGGCGGCTGCGGCGGCTGAA
TCCAGCAACAGGAGATTACG

Downstream 100 bases:

>100_bases
GCGCCGCAACAGGTCCAGATCCAGGGAGGAGACGCCATGCCGCGCTTTACCAAGACAAAAGGCACCTTGGCCGCCACGGC
CCTTGGCCTCGCCCTTGCGG

Product: sulfur oxidation Z protein

Products: NA

Alternate protein names: Sulphur Oxidation Protein SoxZ; Sulfur Oxidation Z Protein; Sulfur Oxidation Protein; Sulfur Compound Chelating Protein SoxZ; Sulphur Oxidation Protein; Chain E Soxyz Complex

Number of amino acids: Translated: 109; Mature: 108

Protein sequence:

>109_residues
MADDAKPRVKVPKSAKAGETVTIKALISHKMESGQRKDAEGKLIPRSIINRFTCDLNGVNVVDVAIDPAVSTNPYFEFDA
KVDAAGEFKFTWYDDDGSVYEDVKPIEVS

Sequences:

>Translated_109_residues
MADDAKPRVKVPKSAKAGETVTIKALISHKMESGQRKDAEGKLIPRSIINRFTCDLNGVNVVDVAIDPAVSTNPYFEFDA
KVDAAGEFKFTWYDDDGSVYEDVKPIEVS
>Mature_108_residues
ADDAKPRVKVPKSAKAGETVTIKALISHKMESGQRKDAEGKLIPRSIINRFTCDLNGVNVVDVAIDPAVSTNPYFEFDAK
VDAAGEFKFTWYDDDGSVYEDVKPIEVS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11980; Mature: 11848

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADDAKPRVKVPKSAKAGETVTIKALISHKMESGQRKDAEGKLIPRSIINRFTCDLNGVN
CCCCCCCCEECCCCCCCCCEEEEHHHHHHHHCCCCCCCCCCCCCCHHHHHHEECCCCCCE
VVDVAIDPAVSTNPYFEFDAKVDAAGEFKFTWYDDDGSVYEDVKPIEVS
EEEEEECCCCCCCCCEEECCCCCCCCCEEEEEECCCCCCCCCCEEEECC
>Mature Secondary Structure 
ADDAKPRVKVPKSAKAGETVTIKALISHKMESGQRKDAEGKLIPRSIINRFTCDLNGVN
CCCCCCCEECCCCCCCCCEEEEHHHHHHHHCCCCCCCCCCCCCCHHHHHHEECCCCCCE
VVDVAIDPAVSTNPYFEFDAKVDAAGEFKFTWYDDDGSVYEDVKPIEVS
EEEEEECCCCCCCCCEEECCCCCCCCCEEEEEECCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA