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The map label for this gene is 119386854

Identifier: 119386854

GI number: 119386854

Start: 1306726

End: 1307286

Strand: Direct

Name: 119386854

Synonym: Pden_4149

Alternate gene names: NA

Gene position: 1306726-1307286 (Clockwise)

Preceding gene: 119386853

Following gene: 119386855

Centisome position: 75.53

GC content: 63.64

Gene sequence:

>561_bases
ATGAAACCGATCCGTGCCCTGGCCGCCTGCCTGTTGCTGGCCGCGACACCCGCAGCCGCGGTCGAAACCGGCGATGACGG
CCTGCACAAGCCCACCTGGCTGCGCGAGACCTTCAAGGACCTGCGCGAGGATCTGGCCGAGGCCAATGCAGAGCAGAAGC
GCCTGCTGATCCTGGTCGAGCAGCGCGGCTGCATCTATTGCGCCGAGATGCACGAGAAGGTCTTTCCCGACCCCGAGATC
GACGCGCTGATCCGCGACGGCTATTTCGTCGTCCAGATGAACCTGTTCGGCGATGTCGAGGTCACGGATTTCGACGGCAC
CGCGCTTTCGGAAAAGGACATGGCGGTGCGCTGGGGCGTCATGTTCACGCCGACGATGATCTTCCTGCCCGAGGACGTTC
CCGAGGGACAGACCGCCTCCGAAGCGGCCGTCGCCCTGATGCCGGGCGCGTTCGGCAAGGGCACCACCAGCGCCCTGCTG
ACCTGGGTTCGGGCGCATGGCTATGAAAATGGCGAGCATTTTCAAAAGTTTCTTGCGCGCGAACTGGAGCGCAAGAACTA
A

Upstream 100 bases:

>100_bases
TTCGGCATCCTGATCGCCACCAATTCCGTGAATGTCATCGCCGACTGGATGATTCGCCACTTCGACTGGACAGCCACGCT
TACCTGAGAGGAGCCCGACC

Downstream 100 bases:

>100_bases
GCCCACCCTCACGCGCCTCGCATACATATAAATATTCATAAATTACTATATTTATGTTGTCAGACCATCCGGCCTTTCGT
TATCATCGGGTCAGGGAGAG

Product: thioredoxin SoxW

Products: NA

Alternate protein names: Thioredoxin; Cytochrome C Biogenesis Protein Transmembrane Region; Thioredoxin SoxW Protein; Thioredoxin-Like Protein; Twin-Arginine Translocation Pathway Signal; Thioredoxin-Related Protein; Thioredoxin-Related Protein-Like Protein; ShxW Protein; Thioredoxin-Like Protein-Like Protein

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MKPIRALAACLLLAATPAAAVETGDDGLHKPTWLRETFKDLREDLAEANAEQKRLLILVEQRGCIYCAEMHEKVFPDPEI
DALIRDGYFVVQMNLFGDVEVTDFDGTALSEKDMAVRWGVMFTPTMIFLPEDVPEGQTASEAAVALMPGAFGKGTTSALL
TWVRAHGYENGEHFQKFLARELERKN

Sequences:

>Translated_186_residues
MKPIRALAACLLLAATPAAAVETGDDGLHKPTWLRETFKDLREDLAEANAEQKRLLILVEQRGCIYCAEMHEKVFPDPEI
DALIRDGYFVVQMNLFGDVEVTDFDGTALSEKDMAVRWGVMFTPTMIFLPEDVPEGQTASEAAVALMPGAFGKGTTSALL
TWVRAHGYENGEHFQKFLARELERKN
>Mature_186_residues
MKPIRALAACLLLAATPAAAVETGDDGLHKPTWLRETFKDLREDLAEANAEQKRLLILVEQRGCIYCAEMHEKVFPDPEI
DALIRDGYFVVQMNLFGDVEVTDFDGTALSEKDMAVRWGVMFTPTMIFLPEDVPEGQTASEAAVALMPGAFGKGTTSALL
TWVRAHGYENGEHFQKFLARELERKN

Specific function: Unknown

COG id: COG2143

COG function: function code O; Thioredoxin-related protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20689; Mature: 20689

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPIRALAACLLLAATPAAAVETGDDGLHKPTWLRETFKDLREDLAEANAEQKRLLILVE
CCHHHHHHHHHHHHCCCCHHEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEC
QRGCIYCAEMHEKVFPDPEIDALIRDGYFVVQMNLFGDVEVTDFDGTALSEKDMAVRWGV
CCCCEEEHHHHHHCCCCCCHHHHHHCCEEEEEEEECCCEEEECCCCCCCCCCCCEEECCE
MFTPTMIFLPEDVPEGQTASEAAVALMPGAFGKGTTSALLTWVRAHGYENGEHFQKFLAR
EECCEEEEECCCCCCCCCCHHHEEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH
ELERKN
HHHCCC
>Mature Secondary Structure
MKPIRALAACLLLAATPAAAVETGDDGLHKPTWLRETFKDLREDLAEANAEQKRLLILVE
CCHHHHHHHHHHHHCCCCHHEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEC
QRGCIYCAEMHEKVFPDPEIDALIRDGYFVVQMNLFGDVEVTDFDGTALSEKDMAVRWGV
CCCCEEEHHHHHHCCCCCCHHHHHHCCEEEEEEEECCCEEEECCCCCCCCCCCCEEECCE
MFTPTMIFLPEDVPEGQTASEAAVALMPGAFGKGTTSALLTWVRAHGYENGEHFQKFLAR
EECCEEEEECCCCCCCCCCHHHEEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH
ELERKN
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA