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The map label for this gene is yjbH [H]

Identifier: 119386839

GI number: 119386839

Start: 1291171

End: 1293366

Strand: Direct

Name: yjbH [H]

Synonym: Pden_4134

Alternate gene names: 119386839

Gene position: 1291171-1293366 (Clockwise)

Preceding gene: 119386838

Following gene: 119386840

Centisome position: 74.63

GC content: 66.8

Gene sequence:

>2196_bases
ATGAGCGCCCATTCGATGCTTACCCGTCGCCTGCTGGCCTCGACCGTGCCGGTAGCGCTGCTTCTGGGTCTCGGCACCGG
CCCGGCCCGCACCGATCCGATGATCGGCGACGTGCTCAACAGCTATGGCCTGCCCGGCGGGGTCGAAACCCCGACGGCCG
AGATGCTGCCCGACGGAACCCTGGGCGGGACCGTGTCCTATAACGAGCTGGGACGGCGCCACAACGTCGTGTTCCAGCTG
CACCCGCGCATCACCACCGCGCTGCGCTATTCGCGGGTCGAGGGCATGAAGGACCATATCGAAGACCTGGGGGACCATAT
CTGGGACCGGTCCTTCGACATCCGCTTCCAGGTCCTGGACGAGGCGGGCTGGCGCCCCGCCGTCGCGGTCGGGCTTCAGG
ACTTCCTGGGAACCGGGGTCTATTCCGGCGAATACGTCGTCGCCAGCAAGACCATCACCCCGAACATCCGTGCCAGCCTT
GGCGTCGGCTGGGGCCGCCTGGCCGGCAAGATGCGCGAATCGGATGACAACCTGGGCGGCAAGCCCAATGTCGACCAATG
GTTCTCGGGCAGTCCCAAGGCCTTCGGCTCGGTCACCTGGCAGGTCAACGAAAAGCTGAGCCTGGTCGCCGAATATTCCA
GCGACAAATACGCCCCCGAGACCGAGAGGGAGACGAAGGAAGCCCCGGGCAGCCAATTCAACCTGGGCGCCTATTACACC
TTCAGCCCCAGCTATCAGCTTGGCCTCTATACGCTGGGCGGCGATACGTTCGGGGCGCAGTTCAGCTTTGCGCTGAACCC
GCGCAACGCGCCCTTCCCCTCGGGGCTGGAAAAGGCGCCGGCCCCGGTGCGGTCGCGCCCCGCGCCCTCGGCCGATCCCG
AAGGCTGGTCGGGCGCCTGGTCGGCCGATCCGACCGCACAGCCGGCGATCCAGACCGTCCTGGCCGATGCGCTGGCCGAT
GAGGGGCAGATCCTGGAATCCATGGCACTATCGGCGAACCGGGCCGAGGTGCGCATTCGCAACACCCGCTATATCCAGCA
ATCCGAGGCCGTGGGCCGTACCGCGCGGCTGATGACCCGCGCCCTGCCCCCCTCGGTCGAGACGCTGGTCATCACCTCGA
ACTCCGAGGGCATGGCGACTTCGTCGGTGGTGCTGAAACGCTCGGATGTCGAGCGGCTGGAGAATACCGAGGCCGGGCGG
ATCGCCAGTGCCTCCACGCTGGTCGATGCCGATCCGCGGCCGGGCGATCTGGTGGCGACGCAGGGTCTGTTCCCGCGCTT
CCGCTGGAACCTCGGGCCCTATCTCGACATCGGCCTGTTCGACCCCGAGGATCCGCTGCGCTACGAAATGGGTGCCGAGC
TCAAGGCCAGCTACGAGCTTGTGCCGGGCCTGGTCCTGTCGGGCAGCATGCGCCAGCGCGCCTTCGGGAACATGGACCAA
AGCGGTCCCGCGATTCCGCCGGAGCTGAATGGCGGTGTCAGGGGCGATCACTACACCGCAGAGGAATACAAGGCCGATCC
GAGCCTGGAGACCTCTCCCGACGGGGTTCCTCGCGTGCGCTCCGACACCCGGATGTATACGGGCCGGACCTCGCCTACCA
TCCCCGAGCTGACCCTGGCCTGGTATGCCCAGCCGACCGAGCAGGTCTATACGCGGGTGACGGTCGGCCTTCTGGAGCGC
GCCTATGGCGGCGTCTCGGGCGAGATGCTGTGGAAGCCCGCCAATTCGCCCCTGGCCTTCGGCGCCGAGGTCAACCATGT
GAAGAAGCGCGATTTCGACGACGTCTTCGGCTTCCGCGACTACGAGGTCACGACCGGGCACCTGTCGGCCTATTACGAAT
TCGCCAACGGCTTCACGGCACAGCTGGATGTCGGCAAGTATCTGGCCGGCGACAAGGGCGCGACCATCACGCTGACCCGC
GAATTCGCCAACGGCTGGCGCGTCGGCGCCTTCGCGACCAAGACCGACATGAGCGACGAGGAATTCGGCAACGGCTCGTT
CGACAAGGGCATTACCGTCTCGCTGCCGATTTCCTGGGCCGCAGGCACGCCGTCGCGCGATCGCGCGAGCAGCACGCTGC
GGTCGCTGTCGCGCGACGGCGGGGCGCGCGTGAACGTGGACGGCCGGCTCTACGACAAGGTCCGGGACGCGCAATCGGTC
AAACTCTATCAAGGCTGGGGGAGGTTCTGGCGATGA

Upstream 100 bases:

>100_bases
ACCGAGCGAATAAGCCACAGATCCGGGTGCCGCAGGACCAAGCCCGCGGCACCGAACCACCTGCCGCCCGCAGCGGGCCG
CGACCTGAGAGGAGCCGCCG

Downstream 100 bases:

>100_bases
TCACGACCCGCATCCACCGGGCGGTGCTGCCGGTGCTGCTGATCGCGGGCCTTGCTGCCTGCGGCAACGACGACACCGGC
AGGGAGGCAAACCCCCTGCT

Product: protein of unknown function DUF940, membrane lipoprotein putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 731; Mature: 730

Protein sequence:

>731_residues
MSAHSMLTRRLLASTVPVALLLGLGTGPARTDPMIGDVLNSYGLPGGVETPTAEMLPDGTLGGTVSYNELGRRHNVVFQL
HPRITTALRYSRVEGMKDHIEDLGDHIWDRSFDIRFQVLDEAGWRPAVAVGLQDFLGTGVYSGEYVVASKTITPNIRASL
GVGWGRLAGKMRESDDNLGGKPNVDQWFSGSPKAFGSVTWQVNEKLSLVAEYSSDKYAPETERETKEAPGSQFNLGAYYT
FSPSYQLGLYTLGGDTFGAQFSFALNPRNAPFPSGLEKAPAPVRSRPAPSADPEGWSGAWSADPTAQPAIQTVLADALAD
EGQILESMALSANRAEVRIRNTRYIQQSEAVGRTARLMTRALPPSVETLVITSNSEGMATSSVVLKRSDVERLENTEAGR
IASASTLVDADPRPGDLVATQGLFPRFRWNLGPYLDIGLFDPEDPLRYEMGAELKASYELVPGLVLSGSMRQRAFGNMDQ
SGPAIPPELNGGVRGDHYTAEEYKADPSLETSPDGVPRVRSDTRMYTGRTSPTIPELTLAWYAQPTEQVYTRVTVGLLER
AYGGVSGEMLWKPANSPLAFGAEVNHVKKRDFDDVFGFRDYEVTTGHLSAYYEFANGFTAQLDVGKYLAGDKGATITLTR
EFANGWRVGAFATKTDMSDEEFGNGSFDKGITVSLPISWAAGTPSRDRASSTLRSLSRDGGARVNVDGRLYDKVRDAQSV
KLYQGWGRFWR

Sequences:

>Translated_731_residues
MSAHSMLTRRLLASTVPVALLLGLGTGPARTDPMIGDVLNSYGLPGGVETPTAEMLPDGTLGGTVSYNELGRRHNVVFQL
HPRITTALRYSRVEGMKDHIEDLGDHIWDRSFDIRFQVLDEAGWRPAVAVGLQDFLGTGVYSGEYVVASKTITPNIRASL
GVGWGRLAGKMRESDDNLGGKPNVDQWFSGSPKAFGSVTWQVNEKLSLVAEYSSDKYAPETERETKEAPGSQFNLGAYYT
FSPSYQLGLYTLGGDTFGAQFSFALNPRNAPFPSGLEKAPAPVRSRPAPSADPEGWSGAWSADPTAQPAIQTVLADALAD
EGQILESMALSANRAEVRIRNTRYIQQSEAVGRTARLMTRALPPSVETLVITSNSEGMATSSVVLKRSDVERLENTEAGR
IASASTLVDADPRPGDLVATQGLFPRFRWNLGPYLDIGLFDPEDPLRYEMGAELKASYELVPGLVLSGSMRQRAFGNMDQ
SGPAIPPELNGGVRGDHYTAEEYKADPSLETSPDGVPRVRSDTRMYTGRTSPTIPELTLAWYAQPTEQVYTRVTVGLLER
AYGGVSGEMLWKPANSPLAFGAEVNHVKKRDFDDVFGFRDYEVTTGHLSAYYEFANGFTAQLDVGKYLAGDKGATITLTR
EFANGWRVGAFATKTDMSDEEFGNGSFDKGITVSLPISWAAGTPSRDRASSTLRSLSRDGGARVNVDGRLYDKVRDAQSV
KLYQGWGRFWR
>Mature_730_residues
SAHSMLTRRLLASTVPVALLLGLGTGPARTDPMIGDVLNSYGLPGGVETPTAEMLPDGTLGGTVSYNELGRRHNVVFQLH
PRITTALRYSRVEGMKDHIEDLGDHIWDRSFDIRFQVLDEAGWRPAVAVGLQDFLGTGVYSGEYVVASKTITPNIRASLG
VGWGRLAGKMRESDDNLGGKPNVDQWFSGSPKAFGSVTWQVNEKLSLVAEYSSDKYAPETERETKEAPGSQFNLGAYYTF
SPSYQLGLYTLGGDTFGAQFSFALNPRNAPFPSGLEKAPAPVRSRPAPSADPEGWSGAWSADPTAQPAIQTVLADALADE
GQILESMALSANRAEVRIRNTRYIQQSEAVGRTARLMTRALPPSVETLVITSNSEGMATSSVVLKRSDVERLENTEAGRI
ASASTLVDADPRPGDLVATQGLFPRFRWNLGPYLDIGLFDPEDPLRYEMGAELKASYELVPGLVLSGSMRQRAFGNMDQS
GPAIPPELNGGVRGDHYTAEEYKADPSLETSPDGVPRVRSDTRMYTGRTSPTIPELTLAWYAQPTEQVYTRVTVGLLERA
YGGVSGEMLWKPANSPLAFGAEVNHVKKRDFDDVFGFRDYEVTTGHLSAYYEFANGFTAQLDVGKYLAGDKGATITLTRE
FANGWRVGAFATKTDMSDEEFGNGSFDKGITVSLPISWAAGTPSRDRASSTLRSLSRDGGARVNVDGRLYDKVRDAQSVK
LYQGWGRFWR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ymcA [H]

Homologues:

Organism=Escherichia coli, GI1790461, Length=744, Percent_Identity=29.9731182795699, Blast_Score=253, Evalue=4e-68,
Organism=Escherichia coli, GI1787219, Length=706, Percent_Identity=29.1784702549575, Blast_Score=241, Evalue=1e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010344 [H]

Pfam domain/function: PF06082 DUF940 [H]

EC number: NA

Molecular weight: Translated: 79604; Mature: 79473

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAHSMLTRRLLASTVPVALLLGLGTGPARTDPMIGDVLNSYGLPGGVETPTAEMLPDGT
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHCCCCC
LGGTVSYNELGRRHNVVFQLHPRITTALRYSRVEGMKDHIEDLGDHIWDRSFDIRFQVLD
CCCEEEHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
EAGWRPAVAVGLQDFLGTGVYSGEYVVASKTITPNIRASLGVGWGRLAGKMRESDDNLGG
CCCCCCHHHHHHHHHHCCCCCCCCEEEEECEECCCCHHCCCCCHHHHHHHHHCCCCCCCC
KPNVDQWFSGSPKAFGSVTWQVNEKLSLVAEYSSDKYAPETERETKEAPGSQFNLGAYYT
CCCCCHHCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCCHHHHHHCCCCEEECCEEEE
FSPSYQLGLYTLGGDTFGAQFSFALNPRNAPFPSGLEKAPAPVRSRPAPSADPEGWSGAW
ECCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SADPTAQPAIQTVLADALADEGQILESMALSANRAEVRIRNTRYIQQSEAVGRTARLMTR
CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHH
ALPPSVETLVITSNSEGMATSSVVLKRSDVERLENTEAGRIASASTLVDADPRPGDLVAT
CCCCCCEEEEEECCCCCCCHHHHEEEHHHHHHHHCCCCCCEECCCEEECCCCCCCCEEEE
QGLFPRFRWNLGPYLDIGLFDPEDPLRYEMGAELKASYELVPGLVLSGSMRQRAFGNMDQ
CCCCCCEECCCCCEEEEECCCCCCCCHHHCCCCCEECHHHCCCEEECCCHHHHHCCCCCC
SGPAIPPELNGGVRGDHYTAEEYKADPSLETSPDGVPRVRSDTRMYTGRTSPTIPELTLA
CCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEE
WYAQPTEQVYTRVTVGLLERAYGGVSGEMLWKPANSPLAFGAEVNHVKKRDFDDVFGFRD
EECCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEECCCCCHHHHCCHHHHCCCCC
YEVTTGHLSAYYEFANGFTAQLDVGKYLAGDKGATITLTREFANGWRVGAFATKTDMSDE
EEEECCHHHHHHHHHCCEEEEEECCHHHCCCCCCEEEEEHHHCCCEEEEEEEECCCCCHH
EFGNGSFDKGITVSLPISWAAGTPSRDRASSTLRSLSRDGGARVNVDGRLYDKVRDAQSV
HCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEECCHHHHHHHCCHHE
KLYQGWGRFWR
EHHHHHHHHCC
>Mature Secondary Structure 
SAHSMLTRRLLASTVPVALLLGLGTGPARTDPMIGDVLNSYGLPGGVETPTAEMLPDGT
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHCCCCC
LGGTVSYNELGRRHNVVFQLHPRITTALRYSRVEGMKDHIEDLGDHIWDRSFDIRFQVLD
CCCEEEHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
EAGWRPAVAVGLQDFLGTGVYSGEYVVASKTITPNIRASLGVGWGRLAGKMRESDDNLGG
CCCCCCHHHHHHHHHHCCCCCCCCEEEEECEECCCCHHCCCCCHHHHHHHHHCCCCCCCC
KPNVDQWFSGSPKAFGSVTWQVNEKLSLVAEYSSDKYAPETERETKEAPGSQFNLGAYYT
CCCCCHHCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCCHHHHHHCCCCEEECCEEEE
FSPSYQLGLYTLGGDTFGAQFSFALNPRNAPFPSGLEKAPAPVRSRPAPSADPEGWSGAW
ECCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SADPTAQPAIQTVLADALADEGQILESMALSANRAEVRIRNTRYIQQSEAVGRTARLMTR
CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHH
ALPPSVETLVITSNSEGMATSSVVLKRSDVERLENTEAGRIASASTLVDADPRPGDLVAT
CCCCCCEEEEEECCCCCCCHHHHEEEHHHHHHHHCCCCCCEECCCEEECCCCCCCCEEEE
QGLFPRFRWNLGPYLDIGLFDPEDPLRYEMGAELKASYELVPGLVLSGSMRQRAFGNMDQ
CCCCCCEECCCCCEEEEECCCCCCCCHHHCCCCCEECHHHCCCEEECCCHHHHHCCCCCC
SGPAIPPELNGGVRGDHYTAEEYKADPSLETSPDGVPRVRSDTRMYTGRTSPTIPELTLA
CCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEE
WYAQPTEQVYTRVTVGLLERAYGGVSGEMLWKPANSPLAFGAEVNHVKKRDFDDVFGFRD
EECCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEECCCCCHHHHCCHHHHCCCCC
YEVTTGHLSAYYEFANGFTAQLDVGKYLAGDKGATITLTREFANGWRVGAFATKTDMSDE
EEEECCHHHHHHHHHCCEEEEEECCHHHCCCCCCEEEEEHHHCCCEEEEEEEECCCCCHH
EFGNGSFDKGITVSLPISWAAGTPSRDRASSTLRSLSRDGGARVNVDGRLYDKVRDAQSV
HCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEECCHHHHHHHCCHHE
KLYQGWGRFWR
EHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]