| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
Click here to switch to the map view.
The map label for this gene is livG [H]
Identifier: 119386727
GI number: 119386727
Start: 1168499
End: 1169239
Strand: Direct
Name: livG [H]
Synonym: Pden_4020
Alternate gene names: 119386727
Gene position: 1168499-1169239 (Clockwise)
Preceding gene: 119386726
Following gene: 119386728
Centisome position: 67.54
GC content: 66.94
Gene sequence:
>741_bases ATGACCGCGCTTCTTGAAGTGGACGGGATCTCGGTCAGCTTCGACGGGTTCCGGGCGATCAACAACCTGTCCTTCAGCAT CGGAGCGGCGGAACTGCGCGCGGTGATCGGCCCCAACGGCGCGGGCAAGACCACCTTCATGGATATCGTGACCGGCAAGA CCCGGCCCGATTCCGGCGATGTGAAGTTCGGCGAAAGTTCGAAATCGCTGCTGAGGATGAACGAGGCGCAGATCGCCCGC GCCGGCATCGGCCGCAAGTTCCAGCGTCCCACCGTCTTCGAGGACCAAAGCGTCGCCGCCAACCTGACCATGGCGCTGAA GGCCAGCCGCGGCCCCTTTGCGGTGCTGTTCTGGAAACCCTCGGCGGCGTCGGCCGCGCGGGTGGCGGAACTGGCGGCCG AGGTCGGTCTGGCCGAGCACACCCACCGCAAGGCGGGCGAGTTGAGCCACGGCCAGAAACAATGGCTGGAGATCGGCATG CTGCTGGCCTCGGCCCCGCGCCTGCTGCTGGTCGACGAACCCGCGGCCGGCATGACGCTGGCGGAACGCGAGCAGACCAC GGCGCTGCTGGTCCGGCTGGCGCAGACGCGCGCCGTGGTGGTGGTCGAACACGACATGGACTTCGTGCGCCGTCTGGATT GCAAGGTGACGGTGCTGCATCAGGGATCGGTGCTGGCCGAGGGCAGCCTGGACCATGTGACCCGCAATCCCGACGTGATC GAAGTCTATCTGGGGCGCTGA
Upstream 100 bases:
>100_bases CGGGCATCTTCGACCGGTTGGCGGGCATCCTGCCGCCGCGCCGCCATGGCCGCGACCTTGGCCCCGACCAGGGCGCATTG CAGGAACAGGAGGCCAAGGC
Downstream 100 bases:
>100_bases GACATGCTGGAAGCCAGAAACCTGACCCTTCACCATGGCGGCAGCCAGATCCTTCACGGCATCGACATCGACGCCCGGCC CGGTCGCGTGACCTGCGTGA
Product: ABC transporter related
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: LIV-I protein G [H]
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MTALLEVDGISVSFDGFRAINNLSFSIGAAELRAVIGPNGAGKTTFMDIVTGKTRPDSGDVKFGESSKSLLRMNEAQIAR AGIGRKFQRPTVFEDQSVAANLTMALKASRGPFAVLFWKPSAASAARVAELAAEVGLAEHTHRKAGELSHGQKQWLEIGM LLASAPRLLLVDEPAAGMTLAEREQTTALLVRLAQTRAVVVVEHDMDFVRRLDCKVTVLHQGSVLAEGSLDHVTRNPDVI EVYLGR
Sequences:
>Translated_246_residues MTALLEVDGISVSFDGFRAINNLSFSIGAAELRAVIGPNGAGKTTFMDIVTGKTRPDSGDVKFGESSKSLLRMNEAQIAR AGIGRKFQRPTVFEDQSVAANLTMALKASRGPFAVLFWKPSAASAARVAELAAEVGLAEHTHRKAGELSHGQKQWLEIGM LLASAPRLLLVDEPAAGMTLAEREQTTALLVRLAQTRAVVVVEHDMDFVRRLDCKVTVLHQGSVLAEGSLDHVTRNPDVI EVYLGR >Mature_245_residues TALLEVDGISVSFDGFRAINNLSFSIGAAELRAVIGPNGAGKTTFMDIVTGKTRPDSGDVKFGESSKSLLRMNEAQIARA GIGRKFQRPTVFEDQSVAANLTMALKASRGPFAVLFWKPSAASAARVAELAAEVGLAEHTHRKAGELSHGQKQWLEIGML LASAPRLLLVDEPAAGMTLAEREQTTALLVRLAQTRAVVVVEHDMDFVRRLDCKVTVLHQGSVLAEGSLDHVTRNPDVIE VYLGR
Specific function: Component of the leucine-specific transport system [H]
COG id: COG4674
COG function: function code R; Uncharacterized ABC-type transport system, ATPase component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI27881501, Length=230, Percent_Identity=24.3478260869565, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI30795238, Length=230, Percent_Identity=24.3478260869565, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI31657092, Length=249, Percent_Identity=24.0963855421687, Blast_Score=78, Evalue=6e-15, Organism=Homo sapiens, GI27262624, Length=230, Percent_Identity=28.695652173913, Blast_Score=78, Evalue=9e-15, Organism=Homo sapiens, GI27262626, Length=230, Percent_Identity=28.695652173913, Blast_Score=78, Evalue=9e-15, Organism=Homo sapiens, GI116734710, Length=213, Percent_Identity=25.8215962441315, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI21536376, Length=224, Percent_Identity=25.8928571428571, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI105990541, Length=216, Percent_Identity=24.537037037037, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI47078218, Length=219, Percent_Identity=26.4840182648402, Blast_Score=68, Evalue=7e-12, Organism=Homo sapiens, GI148612844, Length=222, Percent_Identity=28.3783783783784, Blast_Score=68, Evalue=7e-12, Organism=Homo sapiens, GI255708477, Length=222, Percent_Identity=28.3783783783784, Blast_Score=68, Evalue=7e-12, Organism=Homo sapiens, GI45446740, Length=219, Percent_Identity=26.4840182648402, Blast_Score=68, Evalue=8e-12, Organism=Homo sapiens, GI171184400, Length=229, Percent_Identity=27.0742358078603, Blast_Score=68, Evalue=8e-12, Organism=Homo sapiens, GI27436953, Length=211, Percent_Identity=25.5924170616114, Blast_Score=68, Evalue=8e-12, Organism=Homo sapiens, GI150417984, Length=216, Percent_Identity=27.7777777777778, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI21536378, Length=215, Percent_Identity=24.6511627906977, Blast_Score=65, Evalue=4e-11, Organism=Homo sapiens, GI9955963, Length=234, Percent_Identity=26.0683760683761, Blast_Score=65, Evalue=4e-11, Organism=Escherichia coli, GI1789864, Length=251, Percent_Identity=35.4581673306773, Blast_Score=153, Evalue=1e-38, Organism=Escherichia coli, GI1788897, Length=238, Percent_Identity=30.2521008403361, Blast_Score=105, Evalue=2e-24, Organism=Escherichia coli, GI1790525, Length=248, Percent_Identity=26.6129032258064, Blast_Score=97, Evalue=7e-22, Organism=Escherichia coli, GI87081791, Length=239, Percent_Identity=25.9414225941423, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1790190, Length=247, Percent_Identity=27.9352226720648, Blast_Score=95, Evalue=4e-21, Organism=Escherichia coli, GI1786398, Length=226, Percent_Identity=31.4159292035398, Blast_Score=94, Evalue=6e-21, Organism=Escherichia coli, GI1788225, Length=245, Percent_Identity=27.3469387755102, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1787029, Length=235, Percent_Identity=26.8085106382979, Blast_Score=92, Evalue=5e-20, Organism=Escherichia coli, GI1788761, Length=237, Percent_Identity=29.1139240506329, Blast_Score=91, Evalue=7e-20, Organism=Escherichia coli, GI87081834, Length=214, Percent_Identity=29.9065420560748, Blast_Score=91, Evalue=8e-20, Organism=Escherichia coli, GI87082268, Length=245, Percent_Identity=30.6122448979592, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1790467, Length=211, Percent_Identity=30.8056872037915, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1790739, Length=232, Percent_Identity=27.1551724137931, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1787792, Length=239, Percent_Identity=25.9414225941423, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1789593, Length=245, Percent_Identity=28.1632653061224, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI48995001, Length=222, Percent_Identity=29.2792792792793, Blast_Score=85, Evalue=4e-18, Organism=Escherichia coli, GI1787370, Length=239, Percent_Identity=25.5230125523013, Blast_Score=85, Evalue=5e-18, Organism=Escherichia coli, GI1788450, Length=249, Percent_Identity=27.710843373494, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1786345, Length=240, Percent_Identity=26.25, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1788472, Length=244, Percent_Identity=27.0491803278689, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1789991, Length=255, Percent_Identity=26.6666666666667, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI1787712, Length=229, Percent_Identity=27.0742358078603, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI48994943, Length=233, Percent_Identity=29.1845493562232, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1789672, Length=242, Percent_Identity=21.900826446281, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1790544, Length=259, Percent_Identity=25.0965250965251, Blast_Score=77, Evalue=7e-16, Organism=Escherichia coli, GI1789963, Length=256, Percent_Identity=26.5625, Blast_Score=77, Evalue=7e-16, Organism=Escherichia coli, GI145693107, Length=224, Percent_Identity=28.5714285714286, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1790162, Length=243, Percent_Identity=25.5144032921811, Blast_Score=75, Evalue=3e-15, Organism=Escherichia coli, GI1788506, Length=260, Percent_Identity=27.3076923076923, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI87081709, Length=237, Percent_Identity=25.3164556962025, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI1789891, Length=235, Percent_Identity=27.2340425531915, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI1786698, Length=221, Percent_Identity=27.1493212669683, Blast_Score=74, Evalue=8e-15, Organism=Escherichia coli, GI1787089, Length=228, Percent_Identity=24.1228070175439, Blast_Score=74, Evalue=9e-15, Organism=Escherichia coli, GI1786872, Length=239, Percent_Identity=24.2677824267782, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1787548, Length=239, Percent_Identity=24.6861924686192, Blast_Score=73, Evalue=1e-14, Organism=Escherichia coli, GI87081782, Length=239, Percent_Identity=26.7782426778243, Blast_Score=72, Evalue=2e-14, Organism=Escherichia coli, GI48994997, Length=242, Percent_Identity=26.4462809917355, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1787758, Length=223, Percent_Identity=25.1121076233184, Blast_Score=71, Evalue=5e-14, Organism=Escherichia coli, GI1787500, Length=253, Percent_Identity=26.4822134387352, Blast_Score=71, Evalue=8e-14, Organism=Escherichia coli, GI1789586, Length=241, Percent_Identity=28.2157676348548, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1786563, Length=224, Percent_Identity=24.5535714285714, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1788644, Length=202, Percent_Identity=26.7326732673267, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1787547, Length=249, Percent_Identity=25.7028112449799, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1788210, Length=225, Percent_Identity=24.8888888888889, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI1789873, Length=210, Percent_Identity=24.2857142857143, Blast_Score=68, Evalue=5e-13, Organism=Escherichia coli, GI1787105, Length=247, Percent_Identity=26.3157894736842, Blast_Score=68, Evalue=6e-13, Organism=Escherichia coli, GI87082267, Length=236, Percent_Identity=27.1186440677966, Blast_Score=67, Evalue=7e-13, Organism=Escherichia coli, GI1786253, Length=208, Percent_Identity=24.0384615384615, Blast_Score=67, Evalue=9e-13, Organism=Escherichia coli, GI1789962, Length=228, Percent_Identity=26.3157894736842, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1786654, Length=228, Percent_Identity=24.5614035087719, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1789032, Length=241, Percent_Identity=24.4813278008299, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1787759, Length=251, Percent_Identity=25.8964143426295, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI48994883, Length=249, Percent_Identity=26.5060240963855, Blast_Score=64, Evalue=7e-12, Organism=Escherichia coli, GI1786803, Length=229, Percent_Identity=24.0174672489083, Blast_Score=64, Evalue=1e-11, Organism=Caenorhabditis elegans, GI115533608, Length=222, Percent_Identity=27.9279279279279, Blast_Score=88, Evalue=5e-18, Organism=Caenorhabditis elegans, GI17541710, Length=219, Percent_Identity=27.3972602739726, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17565586, Length=212, Percent_Identity=26.4150943396226, Blast_Score=74, Evalue=6e-14, Organism=Caenorhabditis elegans, GI17510237, Length=230, Percent_Identity=28.2608695652174, Blast_Score=74, Evalue=8e-14, Organism=Caenorhabditis elegans, GI17543740, Length=221, Percent_Identity=27.1493212669683, Blast_Score=71, Evalue=5e-13, Organism=Caenorhabditis elegans, GI71983516, Length=222, Percent_Identity=26.5765765765766, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71983510, Length=222, Percent_Identity=26.5765765765766, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71983523, Length=222, Percent_Identity=26.5765765765766, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17565938, Length=228, Percent_Identity=25, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI25146777, Length=212, Percent_Identity=25.4716981132075, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17558664, Length=212, Percent_Identity=25.4716981132075, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI24666092, Length=235, Percent_Identity=30.2127659574468, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI116007184, Length=222, Percent_Identity=24.3243243243243, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI221500365, Length=222, Percent_Identity=24.3243243243243, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI28574744, Length=209, Percent_Identity=29.1866028708134, Blast_Score=74, Evalue=9e-14, Organism=Drosophila melanogaster, GI221512771, Length=219, Percent_Identity=26.027397260274, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI21357907, Length=234, Percent_Identity=28.2051282051282, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI161076684, Length=218, Percent_Identity=29.3577981651376, Blast_Score=70, Evalue=9e-13, Organism=Drosophila melanogaster, GI24581617, Length=218, Percent_Identity=29.3577981651376, Blast_Score=70, Evalue=9e-13, Organism=Drosophila melanogaster, GI24581615, Length=218, Percent_Identity=29.3577981651376, Blast_Score=70, Evalue=9e-13, Organism=Drosophila melanogaster, GI161076682, Length=218, Percent_Identity=29.3577981651376, Blast_Score=70, Evalue=9e-13, Organism=Drosophila melanogaster, GI24643674, Length=227, Percent_Identity=25.5506607929515, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI85724864, Length=180, Percent_Identity=31.6666666666667, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24580555, Length=180, Percent_Identity=31.6666666666667, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI85816269, Length=180, Percent_Identity=31.6666666666667, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24580553, Length=180, Percent_Identity=31.6666666666667, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24648314, Length=234, Percent_Identity=22.6495726495727, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI85726357, Length=211, Percent_Identity=27.0142180094787, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI17136662, Length=213, Percent_Identity=28.6384976525822, Blast_Score=65, Evalue=5e-11, Organism=Drosophila melanogaster, GI24641565, Length=229, Percent_Identity=24.8908296943231, Blast_Score=64, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 26475; Mature: 26344
Theoretical pI: Translated: 7.78; Mature: 7.78
Prosite motif: PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALLEVDGISVSFDGFRAINNLSFSIGAAELRAVIGPNGAGKTTFMDIVTGKTRPDSGD CCEEEEECCCEEECCCHHHHCCCEEEECHHHHHEEECCCCCCCEEEEEEEECCCCCCCCC VKFGESSKSLLRMNEAQIARAGIGRKFQRPTVFEDQSVAANLTMALKASRGPFAVLFWKP EEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHEEEEEEEEECCCCEEEEEECC SAASAARVAELAAEVGLAEHTHRKAGELSHGQKQWLEIGMLLASAPRLLLVDEPAAGMTL CCCHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCEE AEREQTTALLVRLAQTRAVVVVEHDMDFVRRLDCKVTVLHQGSVLAEGSLDHVTRNPDVI HHHHHHHHHHHHHHCCEEEEEEECCHHHHHHCCCEEEEEECCCEEECCCHHHHCCCCCEE EVYLGR EEEECC >Mature Secondary Structure TALLEVDGISVSFDGFRAINNLSFSIGAAELRAVIGPNGAGKTTFMDIVTGKTRPDSGD CEEEEECCCEEECCCHHHHCCCEEEECHHHHHEEECCCCCCCEEEEEEEECCCCCCCCC VKFGESSKSLLRMNEAQIARAGIGRKFQRPTVFEDQSVAANLTMALKASRGPFAVLFWKP EEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHEEEEEEEEECCCCEEEEEECC SAASAARVAELAAEVGLAEHTHRKAGELSHGQKQWLEIGMLLASAPRLLLVDEPAAGMTL CCCHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCEE AEREQTTALLVRLAQTRAVVVVEHDMDFVRRLDCKVTVLHQGSVLAEGSLDHVTRNPDVI HHHHHHHHHHHHHHCCEEEEEEECCHHHHHHCCCEEEEEECCCEEECCCHHHHCCCCCEE EVYLGR EEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]