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The map label for this gene is 119386556

Identifier: 119386556

GI number: 119386556

Start: 982462

End: 983535

Strand: Direct

Name: 119386556

Synonym: Pden_3849

Alternate gene names: NA

Gene position: 982462-983535 (Clockwise)

Preceding gene: 119386555

Following gene: 119386557

Centisome position: 56.79

GC content: 61.82

Gene sequence:

>1074_bases
GTGAGAGTGGACTTCCCCGGATTGTTGATCGAGAGCCATCGCAACGGCTCTCCTCGCTATCGCGTTCGCGTCGAGGGCCG
GAAGCATGTTCGTATTCACCTTCCGGTCGGACCGGAGGACAAGGACTTTGCCAACTACTATTACGCGGCGCGAGCAGGCG
AGAGATGGCTTCCATCTGAGCGGAAGGCGGTCAAGGGCTCGATTGACTGGCTCTGCGCCGAATACCTGTCCTTTGTCGCG
CGGATGGTCGAGGCCGGGCAGATGTCGCCCGCAACGCTGAAGCAGCGGCGCAGTGTCCTGCGCCGCCTCTGCGACTATTC
GGGTGGGGGCAGCGTGCGCTATGGCGATTTCGACATGGATGCCCCCGCTGCCGCTTTCATCGAAATCCGGGATGCTTGGG
CTACGCATCCGGGCGCTGCGGACAATCTCATAAAGACTGTTCGGGCGGTCTATACGTGGGCGCAGGAGCGTGAGTACATC
AGGCACAATCCGGCGGCGGGGATAAAGGCCATCAACGTCAATCCTGCTGGTGGCGCCGTCCCCTGGTCCGTCGCCGAACT
GAAGAAATTCAGGGAACATCATCCCAGAGGCACGACTGCGCATCTTTGGCTGACGCTGCATGCCTTCACGGCGTGCAGGA
TCGGGGATGCGATCTGGTTGGGGCGCGCGCAGGAAGTGATGCGCGACGGGCAACTCTGGCTGGGCTGGCAACCCAGAAAG
CGCGGATCGGCCTTCGTTTCCATCCCCATGATGCCGCCCCTGATCGCGGCAACTCGTGCAGCCGACGGCCCGGCATACCT
TCTGAACGAAAAGGGTAAACCCTTCGCCAGCGTCGAGGCGCTGCGCGTGCGTGTCCAGCGTTGGTGCAGCGCGGCAGGGA
TACCGGATCGCTCGTCCCACGGCATTCGCAAGGCGGTAGGCGAACTGATGGCCCAGAACGGGTGCACGCAGTATCAGGTC
ATGGCTGTCATGGCTCATACCCAGGCAAAGACCAGCGAAATCTACACCAAGCGTGTTAAACGACAAATTCTTGCGGCGGA
TGGCGTTAAGGCCCTGGCCGCGCTAGACTGGTGA

Upstream 100 bases:

>100_bases
CGGTACGATTTCTGTGACGTTAGCCGGGGCCGAGGCCGGACAGCATGCACGCCCCGCGCCTCGCCAGATCGCCCCGAAAT
CCTGGGCAACGAGGTAGATC

Downstream 100 bases:

>100_bases
GTGTCCCGCAGCATGGATTTGCGGGACACATATGGCAACAATCACTGAGGGAAATGAGGGAATGGGATTCCAGGGTCGCC
CACCACTCAATCTTTTCAAT

Product: phage integrase family protein

Products: NA

Alternate protein names: Phage Integrase Family Protein; Phage Integrase; Phage-Related Integrase/Recombinase; Phage Integrase/Recombinase; Integrase; Integrase/Recombinase Protein; Phage-Related Integrase; Phage Related Integrase; Integrase/Recombinase; Site-Specific Recombinase Phage Integrase Family Protein

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MRVDFPGLLIESHRNGSPRYRVRVEGRKHVRIHLPVGPEDKDFANYYYAARAGERWLPSERKAVKGSIDWLCAEYLSFVA
RMVEAGQMSPATLKQRRSVLRRLCDYSGGGSVRYGDFDMDAPAAAFIEIRDAWATHPGAADNLIKTVRAVYTWAQEREYI
RHNPAAGIKAINVNPAGGAVPWSVAELKKFREHHPRGTTAHLWLTLHAFTACRIGDAIWLGRAQEVMRDGQLWLGWQPRK
RGSAFVSIPMMPPLIAATRAADGPAYLLNEKGKPFASVEALRVRVQRWCSAAGIPDRSSHGIRKAVGELMAQNGCTQYQV
MAVMAHTQAKTSEIYTKRVKRQILAADGVKALAALDW

Sequences:

>Translated_357_residues
MRVDFPGLLIESHRNGSPRYRVRVEGRKHVRIHLPVGPEDKDFANYYYAARAGERWLPSERKAVKGSIDWLCAEYLSFVA
RMVEAGQMSPATLKQRRSVLRRLCDYSGGGSVRYGDFDMDAPAAAFIEIRDAWATHPGAADNLIKTVRAVYTWAQEREYI
RHNPAAGIKAINVNPAGGAVPWSVAELKKFREHHPRGTTAHLWLTLHAFTACRIGDAIWLGRAQEVMRDGQLWLGWQPRK
RGSAFVSIPMMPPLIAATRAADGPAYLLNEKGKPFASVEALRVRVQRWCSAAGIPDRSSHGIRKAVGELMAQNGCTQYQV
MAVMAHTQAKTSEIYTKRVKRQILAADGVKALAALDW
>Mature_357_residues
MRVDFPGLLIESHRNGSPRYRVRVEGRKHVRIHLPVGPEDKDFANYYYAARAGERWLPSERKAVKGSIDWLCAEYLSFVA
RMVEAGQMSPATLKQRRSVLRRLCDYSGGGSVRYGDFDMDAPAAAFIEIRDAWATHPGAADNLIKTVRAVYTWAQEREYI
RHNPAAGIKAINVNPAGGAVPWSVAELKKFREHHPRGTTAHLWLTLHAFTACRIGDAIWLGRAQEVMRDGQLWLGWQPRK
RGSAFVSIPMMPPLIAATRAADGPAYLLNEKGKPFASVEALRVRVQRWCSAAGIPDRSSHGIRKAVGELMAQNGCTQYQV
MAVMAHTQAKTSEIYTKRVKRQILAADGVKALAALDW

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39840; Mature: 39840

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVDFPGLLIESHRNGSPRYRVRVEGRKHVRIHLPVGPEDKDFANYYYAARAGERWLPSE
CCCCCCCEEEECCCCCCCEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCH
RKAVKGSIDWLCAEYLSFVARMVEAGQMSPATLKQRRSVLRRLCDYSGGGSVRYGDFDMD
HHHHHCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCC
APAAAFIEIRDAWATHPGAADNLIKTVRAVYTWAQEREYIRHNPAAGIKAINVNPAGGAV
CCHHHHEEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCC
PWSVAELKKFREHHPRGTTAHLWLTLHAFTACRIGDAIWLGRAQEVMRDGQLWLGWQPRK
CCCHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHCCHHHHHHHHHHHHCCCEEECCCCCC
RGSAFVSIPMMPPLIAATRAADGPAYLLNEKGKPFASVEALRVRVQRWCSAAGIPDRSSH
CCCEEEEECCCCCHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
GIRKAVGELMAQNGCTQYQVMAVMAHTQAKTSEIYTKRVKRQILAADGVKALAALDW
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCC
>Mature Secondary Structure
MRVDFPGLLIESHRNGSPRYRVRVEGRKHVRIHLPVGPEDKDFANYYYAARAGERWLPSE
CCCCCCCEEEECCCCCCCEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCH
RKAVKGSIDWLCAEYLSFVARMVEAGQMSPATLKQRRSVLRRLCDYSGGGSVRYGDFDMD
HHHHHCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCC
APAAAFIEIRDAWATHPGAADNLIKTVRAVYTWAQEREYIRHNPAAGIKAINVNPAGGAV
CCHHHHEEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCC
PWSVAELKKFREHHPRGTTAHLWLTLHAFTACRIGDAIWLGRAQEVMRDGQLWLGWQPRK
CCCHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHCCHHHHHHHHHHHHCCCEEECCCCCC
RGSAFVSIPMMPPLIAATRAADGPAYLLNEKGKPFASVEALRVRVQRWCSAAGIPDRSSH
CCCEEEEECCCCCHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
GIRKAVGELMAQNGCTQYQVMAVMAHTQAKTSEIYTKRVKRQILAADGVKALAALDW
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA