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The map label for this gene is 119386041

Identifier: 119386041

GI number: 119386041

Start: 484910

End: 485728

Strand: Direct

Name: 119386041

Synonym: Pden_3324

Alternate gene names: NA

Gene position: 484910-485728 (Clockwise)

Preceding gene: 119386040

Following gene: 119386042

Centisome position: 28.03

GC content: 57.02

Gene sequence:

>819_bases
GTGAAACGATATCTCGCCACTCTGTTGGCTGCGTTGATTTTCCCCGCGGCAGCGGCGGCCCAATCTGAGATCGCATTGGC
GGGCCACCTGATCGCGTTCGACACTATCGACTACGATAGTCATGCGGACCTGCTGTACAAGCTCGCCGGTCAGGTGGTTG
GGCATCTGCGCAGCTACCTGAGTACGGAAGATGACGTTGAGAACGTGGCGTTGAATCACGGCAAGGAATGGGCTGATTTC
ATCTTCCAGCAGATGAAGGACCACTACTGGGAGATGCCTACGGACTATCGGGCGAAGGTGACCAGAGGCTTCCGCGTCCT
CAATGCGCAGAACTTCAATGTTTCGGGGGTGGACCGAATTCGCGACCTGAAAAACGGTGTGACGCCCCGGTCCGACACAA
GGAAATATGTATTCAACGGTTTGCAGAAATGCGGATACCCATACCAGAAATTCGATTCCGATGACGAACGCCGGTTCGCC
GTTCTGATCGACGGAGACTTTGAGAAGTCTGTCCGCCGTTGGATCAAGCCGGGCGCCCGGCAGTTCCAGATCGAGTATGC
GTCCGGTCAAGCCTACGAGCCGGATTTCGTGGTTGAGACGGATACGGAAAAGCTGATCGTCGAGATCAAGGCGCGGAACG
AAATGACCGACGAGATTGTCCTGGCAAAGGCCCGCGCCGCTGCCGAATGGGTGAAATACGCCAATGAACATGCCGAGGCC
AACGGTGGAAAGTCGTGGGGTTATCTTCTGGTTCCCGGTGACTCGATCACCGAAAGCGCCACGTTGGCGGGCCTGGTCGC
GTCACACCGGCGGGAATAG

Upstream 100 bases:

>100_bases
CGATCTACGCCATCCTTGAGATCGAGGGTGCCGCCCAGGGCCAGTATGTCGTCGCGCGGCGTGTGGTCTGGCTGAACCGG
GCCGGCGAATAGGAGGCATT

Downstream 100 bases:

>100_bases
GAGGCGGCTGTGAAGAAGATCGAGAACGGAACAACCGGCGACTTTATTGATAGCCCCAACAAGGCCGCGCTGAAAGAGGT
CAAGTGATCCACATGCTGAC

Product: type III restriction enzyme, res subunit

Products: NA

Alternate protein names: Type III Restriction Protein Res Subunit; Type III Restriction- Helicase Subunit; PstII Restriction- Res Subunit; Type III Restriction; Type III Restriction- System R Subunit

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MKRYLATLLAALIFPAAAAAQSEIALAGHLIAFDTIDYDSHADLLYKLAGQVVGHLRSYLSTEDDVENVALNHGKEWADF
IFQQMKDHYWEMPTDYRAKVTRGFRVLNAQNFNVSGVDRIRDLKNGVTPRSDTRKYVFNGLQKCGYPYQKFDSDDERRFA
VLIDGDFEKSVRRWIKPGARQFQIEYASGQAYEPDFVVETDTEKLIVEIKARNEMTDEIVLAKARAAAEWVKYANEHAEA
NGGKSWGYLLVPGDSITESATLAGLVASHRRE

Sequences:

>Translated_272_residues
MKRYLATLLAALIFPAAAAAQSEIALAGHLIAFDTIDYDSHADLLYKLAGQVVGHLRSYLSTEDDVENVALNHGKEWADF
IFQQMKDHYWEMPTDYRAKVTRGFRVLNAQNFNVSGVDRIRDLKNGVTPRSDTRKYVFNGLQKCGYPYQKFDSDDERRFA
VLIDGDFEKSVRRWIKPGARQFQIEYASGQAYEPDFVVETDTEKLIVEIKARNEMTDEIVLAKARAAAEWVKYANEHAEA
NGGKSWGYLLVPGDSITESATLAGLVASHRRE
>Mature_272_residues
MKRYLATLLAALIFPAAAAAQSEIALAGHLIAFDTIDYDSHADLLYKLAGQVVGHLRSYLSTEDDVENVALNHGKEWADF
IFQQMKDHYWEMPTDYRAKVTRGFRVLNAQNFNVSGVDRIRDLKNGVTPRSDTRKYVFNGLQKCGYPYQKFDSDDERRFA
VLIDGDFEKSVRRWIKPGARQFQIEYASGQAYEPDFVVETDTEKLIVEIKARNEMTDEIVLAKARAAAEWVKYANEHAEA
NGGKSWGYLLVPGDSITESATLAGLVASHRRE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30764; Mature: 30764

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRYLATLLAALIFPAAAAAQSEIALAGHLIAFDTIDYDSHADLLYKLAGQVVGHLRSYL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
STEDDVENVALNHGKEWADFIFQQMKDHYWEMPTDYRAKVTRGFRVLNAQNFNVSGVDRI
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCEEEEECCCCCCCHHHHH
RDLKNGVTPRSDTRKYVFNGLQKCGYPYQKFDSDDERRFAVLIDGDFEKSVRRWIKPGAR
HHHHHCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCCCEEEEEEECCHHHHHHHHHCCCCE
QFQIEYASGQAYEPDFVVETDTEKLIVEIKARNEMTDEIVLAKARAAAEWVKYANEHAEA
EEEEEECCCCCCCCCEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
NGGKSWGYLLVPGDSITESATLAGLVASHRRE
CCCCCCCEEEECCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKRYLATLLAALIFPAAAAAQSEIALAGHLIAFDTIDYDSHADLLYKLAGQVVGHLRSYL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
STEDDVENVALNHGKEWADFIFQQMKDHYWEMPTDYRAKVTRGFRVLNAQNFNVSGVDRI
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCEEEEECCCCCCCHHHHH
RDLKNGVTPRSDTRKYVFNGLQKCGYPYQKFDSDDERRFAVLIDGDFEKSVRRWIKPGAR
HHHHHCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCCCEEEEEEECCHHHHHHHHHCCCCE
QFQIEYASGQAYEPDFVVETDTEKLIVEIKARNEMTDEIVLAKARAAAEWVKYANEHAEA
EEEEEECCCCCCCCCEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
NGGKSWGYLLVPGDSITESATLAGLVASHRRE
CCCCCCCEEEECCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA