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The map label for this gene is 119386005

Identifier: 119386005

GI number: 119386005

Start: 452288

End: 452920

Strand: Direct

Name: 119386005

Synonym: Pden_3286

Alternate gene names: NA

Gene position: 452288-452920 (Clockwise)

Preceding gene: 119386004

Following gene: 119386006

Centisome position: 26.14

GC content: 64.93

Gene sequence:

>633_bases
ATGATTGAGGCGAAAAGGGACGGCGGTATTTCGGACGTTGCCGATACCATGCGCGTGGTGCGGGTCTGGGATCCGGTGGT
GCGCAGCTTTCATTGGGGCCTGGTTGCCGCCTTTGCAGTGGCATGGCTCGCGGCGGACGAGGTGCAACCGCTTCACGAGC
CGGCCGGCTATGCGGTGGCGGCATTGCTTGTGCTCCGCCTGATCTGGGGTTTTGTCGGCAGTCACCATGCCCGCTTCGCG
CAATTCATGCGTGGCCCTGCCGCGACGCTGGTCTATCTCGGAGACATGCTGCGCGGGCGGGAGCGGCGCCATCTCGAGCA
CAACCCGGCCGGCGCCGCGATGATCGTGGCACTTATGGTTACGCTTTCCGGCACCGCGCTGAGCGGCTGGTTGCTCGAAC
AGTCGATCGAGGAAGCCCGTGCCGTGACGTTTGTGGGCGAGCATGGCAGCCGGGAAGTCAGGGGGGACAAGACCTTGAAG
GAGGTGCATGAAACGCTGGCCAACTTGGCGTTGGTCCTCGTGGCCCTGCATGTCGGAGGTGTGGCGCTCACCTCATGGCG
CCATCGGGAGAACCTGCCCCGTGCCATGGTCACGGGCCGAAAGCGCCCCCCTGGCGCAAATGACGTGACCTGA

Upstream 100 bases:

>100_bases
CGCATCGAGGCGACGGTCGATCCCGGCACGCTTCAGGTGATCGAGGTCGAATACGAGGACGGAGGTGAACGGCACTTCCG
TGAGGGCAGGGGGCGCAAAC

Downstream 100 bases:

>100_bases
TCGTTACGCATTCCCGCTGTTGTTGCGGCCCCGCCTGTCTGGCGGGGCCGGTTTGTTTCGCGCGACCGTTGCGGTTCGTC
GGGGCAGGCTGACGGAAAGC

Product: cytochrome B561

Products: NA

Alternate protein names: Cytochrome; B-Type Cytochrome; Cytochrome B/B6 Domain; Hydrogenase Cytochrome B-Type Subunit; Nickel-Dependent Hydrogenase Cytochrome B Subunit; Hydrogenase Cytochrome B-Type Subunit Protein; Nickel-Dependent Hydrogenase Cytochrome B-Type Subunit; Cytochrome B Oxidoreductase Protein; Integral Membrane Protein; Cytochrome C Family Protein; Ni/Fe-Hydrogenase 1 B-Type Cytochrome Subunit

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MIEAKRDGGISDVADTMRVVRVWDPVVRSFHWGLVAAFAVAWLAADEVQPLHEPAGYAVAALLVLRLIWGFVGSHHARFA
QFMRGPAATLVYLGDMLRGRERRHLEHNPAGAAMIVALMVTLSGTALSGWLLEQSIEEARAVTFVGEHGSREVRGDKTLK
EVHETLANLALVLVALHVGGVALTSWRHRENLPRAMVTGRKRPPGANDVT

Sequences:

>Translated_210_residues
MIEAKRDGGISDVADTMRVVRVWDPVVRSFHWGLVAAFAVAWLAADEVQPLHEPAGYAVAALLVLRLIWGFVGSHHARFA
QFMRGPAATLVYLGDMLRGRERRHLEHNPAGAAMIVALMVTLSGTALSGWLLEQSIEEARAVTFVGEHGSREVRGDKTLK
EVHETLANLALVLVALHVGGVALTSWRHRENLPRAMVTGRKRPPGANDVT
>Mature_210_residues
MIEAKRDGGISDVADTMRVVRVWDPVVRSFHWGLVAAFAVAWLAADEVQPLHEPAGYAVAALLVLRLIWGFVGSHHARFA
QFMRGPAATLVYLGDMLRGRERRHLEHNPAGAAMIVALMVTLSGTALSGWLLEQSIEEARAVTFVGEHGSREVRGDKTLK
EVHETLANLALVLVALHVGGVALTSWRHRENLPRAMVTGRKRPPGANDVT

Specific function: Unknown

COG id: COG3658

COG function: function code C; Cytochrome b

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22945; Mature: 22945

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEAKRDGGISDVADTMRVVRVWDPVVRSFHWGLVAAFAVAWLAADEVQPLHEPAGYAVA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHH
ALLVLRLIWGFVGSHHARFAQFMRGPAATLVYLGDMLRGRERRHLEHNPAGAAMIVALMV
HHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
TLSGTALSGWLLEQSIEEARAVTFVGEHGSREVRGDKTLKEVHETLANLALVLVALHVGG
HHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
VALTSWRHRENLPRAMVTGRKRPPGANDVT
HHHHHHHHHHCCCHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MIEAKRDGGISDVADTMRVVRVWDPVVRSFHWGLVAAFAVAWLAADEVQPLHEPAGYAVA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHH
ALLVLRLIWGFVGSHHARFAQFMRGPAATLVYLGDMLRGRERRHLEHNPAGAAMIVALMV
HHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
TLSGTALSGWLLEQSIEEARAVTFVGEHGSREVRGDKTLKEVHETLANLALVLVALHVGG
HHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
VALTSWRHRENLPRAMVTGRKRPPGANDVT
HHHHHHHHHHCCCHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA