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The map label for this gene is opmA [H]

Identifier: 119385998

GI number: 119385998

Start: 445296

End: 446237

Strand: Direct

Name: opmA [H]

Synonym: Pden_3279

Alternate gene names: 119385998

Gene position: 445296-446237 (Clockwise)

Preceding gene: 119385997

Following gene: 119386000

Centisome position: 25.74

GC content: 55.41

Gene sequence:

>942_bases
ATGAAGTTTTTCAGCATGATTGCAATGACGGCCGCGCTTGCGCCTTGTGCGGCCTTGGCCGATGTGAGCTTGTCCGGCTT
TGGCCGATTTGGTCTGACCTATTCGGAGGCGAAGAAACAGGACGGAGAGAACGGCACGTTCCTCCAGAGTCGATTGCGGC
TGGAGATCGATGCATCCGTCGATACCGATATCGGCTTGAAATTTGGCGCAAAAACCTGGGTTCAGGGCGATCACAACAGC
CCTTCCTGGGGCTTCAGTCCCGCGAATTTCTATGTCGAGTATGAAAACTGGTCGCTTGAGATCGGCAATGTGCTTCCGGC
TTTCGATGGAGCTTTATTGCTGAAACAGACGCGGCTGGGGGTTCATGCTGTTTCCGTCGGCGGGGATCCGTTGGGGGATT
TCTTCATTCTGGCCTATCGCGGATATGGCCGCCTTCCTGATCGGACCGGGGTGGCCTTGAATTATGGCACGCGCAACTTC
GACGTGAAGCTGTCCGTGGTGGACCCGGATCAGATCGGCAGCGGCACGGGAGGGGATCTGACCCGAGAGGTTTCCGCCTC
GGTTTTCTATCGGCTAAACGACTGGGAGTTTTCTGCTGCAACGGCGCAGAGCGGGGCCGGGGTCAGGGATAACGATCTTT
ATTTCGTGGGAACGCGTTACAAGGTCAACGATGACCTTCGCATCGGCCTGAACATCAATGACAACGGGTTTGCCGAACTG
GGAACGTCTTACGCCCTGTATGGCGACTACAAGTTTAACCGATTCACGTTGGGTTCCTATGTCGCGTATAATGACGGCGA
TTGGGCGGAAAAGGTGACCGACAGCTCTTATGGTGTCGCCCTCAGATATGATCTGGGTCCAAGTATCTTTCTTGCGGCCT
CAGTTCAGCGCGATTACGAGCGCATGACCCTTGCCGATATGGGTGTGCGGTTCGACTTCTGA

Upstream 100 bases:

>100_bases
CAGGCAATTATGAGGTGGTCGTCGCGAGTTCGGTTTTCAAAAGAATAGCGTCGATTGTACGGTCGGGCGTGGAGGCGTCC
GTTTTTTATGGGGGGGGATA

Downstream 100 bases:

>100_bases
ATAACGCCGCTTTTGTTCACCGACACATATCTCCGCAACCATATGCGGATGGAGGCGAGTTGTACGGATGCGAGGAAATT
GCCGTCTCGCTTGTCGTATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MKFFSMIAMTAALAPCAALADVSLSGFGRFGLTYSEAKKQDGENGTFLQSRLRLEIDASVDTDIGLKFGAKTWVQGDHNS
PSWGFSPANFYVEYENWSLEIGNVLPAFDGALLLKQTRLGVHAVSVGGDPLGDFFILAYRGYGRLPDRTGVALNYGTRNF
DVKLSVVDPDQIGSGTGGDLTREVSASVFYRLNDWEFSAATAQSGAGVRDNDLYFVGTRYKVNDDLRIGLNINDNGFAEL
GTSYALYGDYKFNRFTLGSYVAYNDGDWAEKVTDSSYGVALRYDLGPSIFLAASVQRDYERMTLADMGVRFDF

Sequences:

>Translated_313_residues
MKFFSMIAMTAALAPCAALADVSLSGFGRFGLTYSEAKKQDGENGTFLQSRLRLEIDASVDTDIGLKFGAKTWVQGDHNS
PSWGFSPANFYVEYENWSLEIGNVLPAFDGALLLKQTRLGVHAVSVGGDPLGDFFILAYRGYGRLPDRTGVALNYGTRNF
DVKLSVVDPDQIGSGTGGDLTREVSASVFYRLNDWEFSAATAQSGAGVRDNDLYFVGTRYKVNDDLRIGLNINDNGFAEL
GTSYALYGDYKFNRFTLGSYVAYNDGDWAEKVTDSSYGVALRYDLGPSIFLAASVQRDYERMTLADMGVRFDF
>Mature_313_residues
MKFFSMIAMTAALAPCAALADVSLSGFGRFGLTYSEAKKQDGENGTFLQSRLRLEIDASVDTDIGLKFGAKTWVQGDHNS
PSWGFSPANFYVEYENWSLEIGNVLPAFDGALLLKQTRLGVHAVSVGGDPLGDFFILAYRGYGRLPDRTGVALNYGTRNF
DVKLSVVDPDQIGSGTGGDLTREVSASVFYRLNDWEFSAATAQSGAGVRDNDLYFVGTRYKVNDDLRIGLNINDNGFAEL
GTSYALYGDYKFNRFTLGSYVAYNDGDWAEKVTDSSYGVALRYDLGPSIFLAASVQRDYERMTLADMGVRFDF

Specific function: Forms channels that allow the passive diffusion of small hydrophilic solutes up to an exclusion limit of about 0.6 kDa [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34355; Mature: 34355

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFFSMIAMTAALAPCAALADVSLSGFGRFGLTYSEAKKQDGENGTFLQSRLRLEIDASV
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEEEEEEECCC
DTDIGLKFGAKTWVQGDHNSPSWGFSPANFYVEYENWSLEIGNVLPAFDGALLLKQTRLG
CCCCCEEECCEEEECCCCCCCCCCCCCCEEEEEEECCEEEECCCCCCCCCEEEEEEECCC
VHAVSVGGDPLGDFFILAYRGYGRLPDRTGVALNYGTRNFDVKLSVVDPDQIGSGTGGDL
EEEEEECCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCEEEEEEEECHHHCCCCCCCCH
TREVSASVFYRLNDWEFSAATAQSGAGVRDNDLYFVGTRYKVNDDLRIGLNINDNGFAEL
HHEECEEEEEEECCCEEEEECCCCCCCCCCCCEEEEEEEEEECCCEEEEEEECCCCHHHC
GTSYALYGDYKFNRFTLGSYVAYNDGDWAEKVTDSSYGVALRYDLGPSIFLAASVQRDYE
CCEEEEEECCEECEEEECEEEEECCCCHHHHHCCCCCCEEEEEECCCCEEEEEEHHHHHH
RMTLADMGVRFDF
HHHHHHCCEEECC
>Mature Secondary Structure
MKFFSMIAMTAALAPCAALADVSLSGFGRFGLTYSEAKKQDGENGTFLQSRLRLEIDASV
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEEEEEEECCC
DTDIGLKFGAKTWVQGDHNSPSWGFSPANFYVEYENWSLEIGNVLPAFDGALLLKQTRLG
CCCCCEEECCEEEECCCCCCCCCCCCCCEEEEEEECCEEEECCCCCCCCCEEEEEEECCC
VHAVSVGGDPLGDFFILAYRGYGRLPDRTGVALNYGTRNFDVKLSVVDPDQIGSGTGGDL
EEEEEECCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCEEEEEEEECHHHCCCCCCCCH
TREVSASVFYRLNDWEFSAATAQSGAGVRDNDLYFVGTRYKVNDDLRIGLNINDNGFAEL
HHEECEEEEEEECCCEEEEECCCCCCCCCCCCEEEEEEEEEECCCEEEEEEECCCCHHHC
GTSYALYGDYKFNRFTLGSYVAYNDGDWAEKVTDSSYGVALRYDLGPSIFLAASVQRDYE
CCEEEEEECCEECEEEECEEEEECCCCHHHHHCCCCCCEEEEEECCCCEEEEEEHHHHHH
RMTLADMGVRFDF
HHHHHHCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8142898; 7525973; 9684893 [H]