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The map label for this gene is 119385981

Identifier: 119385981

GI number: 119385981

Start: 425326

End: 426882

Strand: Direct

Name: 119385981

Synonym: Pden_3262

Alternate gene names: NA

Gene position: 425326-426882 (Clockwise)

Preceding gene: 119385980

Following gene: 119385985

Centisome position: 24.58

GC content: 66.22

Gene sequence:

>1557_bases
ATGACGGCATGGTTTTCACGCCGAGATTTTCTGCCGGCAGGGCTTACGGCCGATCAGATCGAGCTCGATGGCAATACCAT
CCGTATCCATGCCCGCTCTTCGGCGGCCGCGGCCGCCTGTCCACACTGCGGGAGCATTTCGGAGCATGTCCACAGTCGGT
ATCGACGTCGCCCGGCCGATGTTCCTGCGCATGGGCGAGCCGTGGAAATCGTCTTGCAGGTTCGTCGCTTTCGCTGCCGC
GCGCCCGGCTGTCCGGCCCGGATTTTCGCCGAACGGTTTCCGTCCGGCGTCACCCGACCGCATATGCGACGCACCTCGCG
CTTGCAGGATCTTGTGCGTCACCTCGGTCTTGCCCTCGGCGGACGACCTGCTCAGGCGCTCGCCCGGCGCCTTCTCGTGC
CTGCAAGCGAAGACACGTTCTTGCGTGGGGCGCGGAGCCTGATGGGCCCCGTCTCCGAACCACCGCGTGTCATCGGCATC
GATGACTGGGCATGGCGCAAGGGGCAGCGTTACGGCACGATGATCTGCGACCTGGAACGGCGGCAGGTGATCGACCTGCT
GCCCGATCGCGAGCCTGCCACCGTGGAAGCGTGGCTCCGCGCACATCCCGGCATCCGGATCATCGCCCGCGACCGCAACG
GCGGCTATGGCGGTGCCGCCACCCGTGCCTTGCCACAGGCGGTTCAGGTCGCCGATCGTTGGCATCTGCTTGAGAACGCG
AGTGCCGCATTCCTGGCGGCCGTGCAGCGCAGCATGCCCGTCATCCGCAGGGCGATCGGGGCGAAGACGCTCGATCCCGC
GCTGCTGACGGCAGCGGAAAGGCTGCAATACGAAGGCTTTCGGCGTCGCCAGCAAACCAATCGGATGGTGAGGACGATGG
CCGATGAGGGCCTGCCCATCAAGCGTATCGTCCGCTCGACCGGCCTCAGCCGCAAGCTCGTTCGCCAGATCCTGCGTGGC
GAGCGCGAAGATGTCTTCCGCATCCGCGAAAGCAGTCTGACACCCTGGCTGCCACGGCTGGAGCGGGAATGGAACGGTGG
TTGCCGGAATGGCGCCGAGCTTTGGCGCCGCCTCAGGGAGGATGGTTTCCGCGGCAGTCTTCGGGTCGTCGGAGAATGGG
CGACACGCCAGCGCCGCGCCGAGCAAGCTGTGCCGAACGGGATGGGGAAATCGCCACCTGCCCGCAGGATTGCGCGGCTC
CTGACCATGGGGCGGGATCACCTGTCCAGAGCCGATGCGCTTCAGGTCGCGCAGATCGAAGCGGCATCGCCAGCCCTTGC
GACCGCCCGGGCGCTCGCCGACAGGTTCACGGATATGGTTCGAAACGGGCGTGAGGATGTCTTGGCCAGCTGGCTCGATG
AGGCGGCAGACAGCATGATCGCTTCCTTTGCCCGTGGCCTTCGCAGCGACTGCGCCGCCGTTGCCGCCGCCTTGCGCGAA
CCTTGGTCGAACGGGCAGACAGAGGGGCAGATCAATCGGCTGAAGACCCTCAAACGCCAGATGTATGGCCGCGCCAACAT
CGATCTGCTCAGGGCACGGCTCCTCGCCCCGGCGTAA

Upstream 100 bases:

>100_bases
CCAGGGTGTTGAACGGCTTGCAATAAGGGGTCTGACGCAGATTTGGTGCAGTTTAGCTTCAACCTCGCTACATTTTGGCC
TTCTTTCAGGGAGGTTACCG

Downstream 100 bases:

>100_bases
ACCAGAAAATGCACCAACTTTGAGTCAGACCCCCGTTTGGATGCCGATTGACACCATGGTGCGCCAGCCCAGATCCAACC
CGACGATCCCGTCCCGCTCC

Product: transposase, IS204/IS1001/IS1096/IS1165 family protein

Products: NA

Alternate protein names: IS6 Family Transposase; ISL3 Family Transposase; LOW QUALITY PROTEIN Transposase; IS Transposase; Transposase For Insertion Sequence Element; Transposase Of ISMdi2 ISL3 Family; IS3L-Like Transposase; Transposase Family Protein; ISL3 Family ISFsp1-Like Transposase; Transposase Subfamily; Transposase Of

Number of amino acids: Translated: 518; Mature: 517

Protein sequence:

>518_residues
MTAWFSRRDFLPAGLTADQIELDGNTIRIHARSSAAAAACPHCGSISEHVHSRYRRRPADVPAHGRAVEIVLQVRRFRCR
APGCPARIFAERFPSGVTRPHMRRTSRLQDLVRHLGLALGGRPAQALARRLLVPASEDTFLRGARSLMGPVSEPPRVIGI
DDWAWRKGQRYGTMICDLERRQVIDLLPDREPATVEAWLRAHPGIRIIARDRNGGYGGAATRALPQAVQVADRWHLLENA
SAAFLAAVQRSMPVIRRAIGAKTLDPALLTAAERLQYEGFRRRQQTNRMVRTMADEGLPIKRIVRSTGLSRKLVRQILRG
EREDVFRIRESSLTPWLPRLEREWNGGCRNGAELWRRLREDGFRGSLRVVGEWATRQRRAEQAVPNGMGKSPPARRIARL
LTMGRDHLSRADALQVAQIEAASPALATARALADRFTDMVRNGREDVLASWLDEAADSMIASFARGLRSDCAAVAAALRE
PWSNGQTEGQINRLKTLKRQMYGRANIDLLRARLLAPA

Sequences:

>Translated_518_residues
MTAWFSRRDFLPAGLTADQIELDGNTIRIHARSSAAAAACPHCGSISEHVHSRYRRRPADVPAHGRAVEIVLQVRRFRCR
APGCPARIFAERFPSGVTRPHMRRTSRLQDLVRHLGLALGGRPAQALARRLLVPASEDTFLRGARSLMGPVSEPPRVIGI
DDWAWRKGQRYGTMICDLERRQVIDLLPDREPATVEAWLRAHPGIRIIARDRNGGYGGAATRALPQAVQVADRWHLLENA
SAAFLAAVQRSMPVIRRAIGAKTLDPALLTAAERLQYEGFRRRQQTNRMVRTMADEGLPIKRIVRSTGLSRKLVRQILRG
EREDVFRIRESSLTPWLPRLEREWNGGCRNGAELWRRLREDGFRGSLRVVGEWATRQRRAEQAVPNGMGKSPPARRIARL
LTMGRDHLSRADALQVAQIEAASPALATARALADRFTDMVRNGREDVLASWLDEAADSMIASFARGLRSDCAAVAAALRE
PWSNGQTEGQINRLKTLKRQMYGRANIDLLRARLLAPA
>Mature_517_residues
TAWFSRRDFLPAGLTADQIELDGNTIRIHARSSAAAAACPHCGSISEHVHSRYRRRPADVPAHGRAVEIVLQVRRFRCRA
PGCPARIFAERFPSGVTRPHMRRTSRLQDLVRHLGLALGGRPAQALARRLLVPASEDTFLRGARSLMGPVSEPPRVIGID
DWAWRKGQRYGTMICDLERRQVIDLLPDREPATVEAWLRAHPGIRIIARDRNGGYGGAATRALPQAVQVADRWHLLENAS
AAFLAAVQRSMPVIRRAIGAKTLDPALLTAAERLQYEGFRRRQQTNRMVRTMADEGLPIKRIVRSTGLSRKLVRQILRGE
REDVFRIRESSLTPWLPRLEREWNGGCRNGAELWRRLREDGFRGSLRVVGEWATRQRRAEQAVPNGMGKSPPARRIARLL
TMGRDHLSRADALQVAQIEAASPALATARALADRFTDMVRNGREDVLASWLDEAADSMIASFARGLRSDCAAVAAALREP
WSNGQTEGQINRLKTLKRQMYGRANIDLLRARLLAPA

Specific function: Unknown

COG id: COG3464

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57987; Mature: 57855

Theoretical pI: Translated: 11.90; Mature: 11.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAWFSRRDFLPAGLTADQIELDGNTIRIHARSSAAAAACPHCGSISEHVHSRYRRRPAD
CCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCHHHCCCCCCCHHHHHHHHHHCCCCC
VPAHGRAVEIVLQVRRFRCRAPGCPARIFAERFPSGVTRPHMRRTSRLQDLVRHLGLALG
CCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCC
GRPAQALARRLLVPASEDTFLRGARSLMGPVSEPPRVIGIDDWAWRKGQRYGTMICDLER
CCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHCCCCCCCHHCCHHH
RQVIDLLPDREPATVEAWLRAHPGIRIIARDRNGGYGGAATRALPQAVQVADRWHLLENA
HHHHHHCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
SAAFLAAVQRSMPVIRRAIGAKTLDPALLTAAERLQYEGFRRRQQTNRMVRTMADEGLPI
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
KRIVRSTGLSRKLVRQILRGEREDVFRIRESSLTPWLPRLEREWNGGCRNGAELWRRLRE
HHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHH
DGFRGSLRVVGEWATRQRRAEQAVPNGMGKSPPARRIARLLTMGRDHLSRADALQVAQIE
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHH
AASPALATARALADRFTDMVRNGREDVLASWLDEAADSMIASFARGLRSDCAAVAAALRE
CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PWSNGQTEGQINRLKTLKRQMYGRANIDLLRARLLAPA
CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
TAWFSRRDFLPAGLTADQIELDGNTIRIHARSSAAAAACPHCGSISEHVHSRYRRRPAD
CCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCHHHCCCCCCCHHHHHHHHHHCCCCC
VPAHGRAVEIVLQVRRFRCRAPGCPARIFAERFPSGVTRPHMRRTSRLQDLVRHLGLALG
CCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCC
GRPAQALARRLLVPASEDTFLRGARSLMGPVSEPPRVIGIDDWAWRKGQRYGTMICDLER
CCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHCCCCCCCHHCCHHH
RQVIDLLPDREPATVEAWLRAHPGIRIIARDRNGGYGGAATRALPQAVQVADRWHLLENA
HHHHHHCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
SAAFLAAVQRSMPVIRRAIGAKTLDPALLTAAERLQYEGFRRRQQTNRMVRTMADEGLPI
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
KRIVRSTGLSRKLVRQILRGEREDVFRIRESSLTPWLPRLEREWNGGCRNGAELWRRLRE
HHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHH
DGFRGSLRVVGEWATRQRRAEQAVPNGMGKSPPARRIARLLTMGRDHLSRADALQVAQIE
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHH
AASPALATARALADRFTDMVRNGREDVLASWLDEAADSMIASFARGLRSDCAAVAAALRE
CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PWSNGQTEGQINRLKTLKRQMYGRANIDLLRARLLAPA
CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA