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The map label for this gene is 119385979

Identifier: 119385979

GI number: 119385979

Start: 422255

End: 422542

Strand: Direct

Name: 119385979

Synonym: Pden_3259

Alternate gene names: NA

Gene position: 422255-422542 (Clockwise)

Preceding gene: 119385978

Following gene: 119385980

Centisome position: 24.41

GC content: 65.62

Gene sequence:

>288_bases
ATGATGCCGCCCTTGTCCGCGAGTGGCGCGAGCGAATCGGGCCGGCGGACCATAACGAGCACCTTGCGCAGCTATCTTCG
TTTCCTCGCGGGTGCAGGCCTCTGTCGCCCCAACCTTGATCACGCCATCCCGCCGGTCGTGCAATGGCGCCTTTCGCCAT
TGCCGCGGTATCTTGCTGCCGCGGATCTCGAACGCGTCGTTGCATCCTGCGATCAACTTACCAGGGGACGCCTGCGAGAC
CGTGCGATCCTGCTCCTGCTCGCCCGCTTGGGGCTGCGGGCGGGATGA

Upstream 100 bases:

>100_bases
CTGCAAAGGAGAGATGTCGCGCGACCATCCATGAAGGTCGCCCGCCATCTTCGCCACCTGCATAAGTTGTTGCCGGAACT
CGGCACGGCGACCCACGACT

Downstream 100 bases:

>100_bases
CGCCGGACTCAGACTCAGCGATCTCGATTGACGTATTCGTTGTTCACGCAGTCGTCGGCCCGCAGTTCGGTGCCGATCAG
GCCGCGCATGTTTTGCAGCA

Product: putative integrase/recombinase

Products: NA

Alternate protein names: Site-Specific Integrase/Recombinase

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MMPPLSASGASESGRRTITSTLRSYLRFLAGAGLCRPNLDHAIPPVVQWRLSPLPRYLAAADLERVVASCDQLTRGRLRD
RAILLLLARLGLRAG

Sequences:

>Translated_95_residues
MMPPLSASGASESGRRTITSTLRSYLRFLAGAGLCRPNLDHAIPPVVQWRLSPLPRYLAAADLERVVASCDQLTRGRLRD
RAILLLLARLGLRAG
>Mature_95_residues
MMPPLSASGASESGRRTITSTLRSYLRFLAGAGLCRPNLDHAIPPVVQWRLSPLPRYLAAADLERVVASCDQLTRGRLRD
RAILLLLARLGLRAG

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10365; Mature: 10365

Theoretical pI: Translated: 11.94; Mature: 11.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMPPLSASGASESGRRTITSTLRSYLRFLAGAGLCRPNLDHAIPPVVQWRLSPLPRYLAA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCHHHHHHHH
ADLERVVASCDQLTRGRLRDRAILLLLARLGLRAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMPPLSASGASESGRRTITSTLRSYLRFLAGAGLCRPNLDHAIPPVVQWRLSPLPRYLAA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCHHHHHHHH
ADLERVVASCDQLTRGRLRDRAILLLLARLGLRAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA