Definition Paracoccus denitrificans PD1222 chromosome 2, complete sequence.
Accession NC_008687
Length 1,730,097

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The map label for this gene is 119385962

Identifier: 119385962

GI number: 119385962

Start: 405618

End: 406619

Strand: Direct

Name: 119385962

Synonym: Pden_3240

Alternate gene names: NA

Gene position: 405618-406619 (Clockwise)

Preceding gene: 119385961

Following gene: 119385963

Centisome position: 23.44

GC content: 67.17

Gene sequence:

>1002_bases
ATGCGAAGAACATTCTGTCTGATCCCGTTTCTGCTCGCGCTGGCACCGCTCGCCGCCGCGGAAGAACGGCCTGCCGGGGA
GGTTGCCATGATCGCGGAACAAAGCGTCGAGGTTCTGGGCGAGCATCTGACAGCCGACGGGCGGCTAGCCGACATTCTCG
ACAATCCCGCCTTTGCCGGATTTGCCGAGCGCATCCTGCCTTGGGCAGGCCGCCGCTACGACCCCGCAATGCCGCTCGGC
CAGATGGCCAGTCTGCTGCCCTATCATAGCGCCGTCGATACCGGCACGGTCGTCGCTGCCCTGAACCGGATGATCGACGA
CGCGGGCGCCGGTCAGACGGTGTTCTACGACATCTACTCCGAAGCGGAGAGGCGGGCCGACCCCGCCAAAGCCGCGACCG
GCCTGTTCTTCTACCGGGGCCGCCCCGGTGCCCCCTTCGCGGTGATCGCGCCGGGCGGCGGCTTCTCCTATGTCGGTTCG
GTGCATGAGGGCTTCCCCTATGCAGAGGCGATCAGCGATCTCGGGCTGAACGCCTTCGTCCTGACCTATCGTGCTGGCCA
GGGCGGTCAGGTCGCCACCGAGGATCTGGCCGCTGCAATCACCTGGATTTTCCGCAACGCGGAAGAACTGGGTGTCGGCA
CCGACGGCTATTCCCTGTGGGGCAGTTCGGCGGGCGCCCGGATGGCGGCCTATATCGGCTCGCACGGGCCTGCCGCCTTC
GGTGGGGCCAATCTGCCGAAGCCGGCTGCCGTCGTCATGGCCTATACCAGCCATTCCGATCTGGCCGAGACAGAGCCGCC
GACCTTCGTGGTCGTGGGCGAACGGGACGGCATCGCCCCGCCCGGCAACATGGAGCGCCGGATCGCCGCCCTGCGCCGGA
TCGGCACGCCGGTCGAATATCACCTCTTTCCCAATGTCGGTCACGGCTTCGGGGCCGGCACCGGCACCAGCGCCGAGGGC
TGGATCGCCGAGGCCGTTCGTTTCTGGCGGCAGCAATTGTGA

Upstream 100 bases:

>100_bases
TATATTTCTGTCAGGCACGACGGATGCTCGTGACGCGCGATGGCGCATCGGTGAGCCGAGGCGGCATTCCCGCCTGATCG
AGGCCCGGAGAACACAACAC

Downstream 100 bases:

>100_bases
GGGGCGCAAGCGCGAAAGGAAGAAAAGCCATGGACAGAATCCGACGGGCAATGCTGCGCTTCATCCCAATATGGGCTGTC
GGGCTCCTCGCCGCACTAAG

Product: hypothetical protein

Products: NA

Alternate protein names: Alpha/Beta Hydrolase; Acetyl Esterase Family; Esterase; Gdsl-Like Lipase/Acylhydrolase; Endo-1 4-Beta-Xylanase B; Esterase/Lipase

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MRRTFCLIPFLLALAPLAAAEERPAGEVAMIAEQSVEVLGEHLTADGRLADILDNPAFAGFAERILPWAGRRYDPAMPLG
QMASLLPYHSAVDTGTVVAALNRMIDDAGAGQTVFYDIYSEAERRADPAKAATGLFFYRGRPGAPFAVIAPGGGFSYVGS
VHEGFPYAEAISDLGLNAFVLTYRAGQGGQVATEDLAAAITWIFRNAEELGVGTDGYSLWGSSAGARMAAYIGSHGPAAF
GGANLPKPAAVVMAYTSHSDLAETEPPTFVVVGERDGIAPPGNMERRIAALRRIGTPVEYHLFPNVGHGFGAGTGTSAEG
WIAEAVRFWRQQL

Sequences:

>Translated_333_residues
MRRTFCLIPFLLALAPLAAAEERPAGEVAMIAEQSVEVLGEHLTADGRLADILDNPAFAGFAERILPWAGRRYDPAMPLG
QMASLLPYHSAVDTGTVVAALNRMIDDAGAGQTVFYDIYSEAERRADPAKAATGLFFYRGRPGAPFAVIAPGGGFSYVGS
VHEGFPYAEAISDLGLNAFVLTYRAGQGGQVATEDLAAAITWIFRNAEELGVGTDGYSLWGSSAGARMAAYIGSHGPAAF
GGANLPKPAAVVMAYTSHSDLAETEPPTFVVVGERDGIAPPGNMERRIAALRRIGTPVEYHLFPNVGHGFGAGTGTSAEG
WIAEAVRFWRQQL
>Mature_333_residues
MRRTFCLIPFLLALAPLAAAEERPAGEVAMIAEQSVEVLGEHLTADGRLADILDNPAFAGFAERILPWAGRRYDPAMPLG
QMASLLPYHSAVDTGTVVAALNRMIDDAGAGQTVFYDIYSEAERRADPAKAATGLFFYRGRPGAPFAVIAPGGGFSYVGS
VHEGFPYAEAISDLGLNAFVLTYRAGQGGQVATEDLAAAITWIFRNAEELGVGTDGYSLWGSSAGARMAAYIGSHGPAAF
GGANLPKPAAVVMAYTSHSDLAETEPPTFVVVGERDGIAPPGNMERRIAALRRIGTPVEYHLFPNVGHGFGAGTGTSAEG
WIAEAVRFWRQQL

Specific function: Unknown

COG id: COG0657

COG function: function code I; Esterase/lipase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35190; Mature: 35190

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRTFCLIPFLLALAPLAAAEERPAGEVAMIAEQSVEVLGEHLTADGRLADILDNPAFAG
CCCHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHH
FAERILPWAGRRYDPAMPLGQMASLLPYHSAVDTGTVVAALNRMIDDAGAGQTVFYDIYS
HHHHHHHHCCCCCCCCCCHHHHHHHHCHHHHCCHHHHHHHHHHHHHHCCCCCEEEEHHHH
EAERRADPAKAATGLFFYRGRPGAPFAVIAPGGGFSYVGSVHEGFPYAEAISDLGLNAFV
HHHHCCCHHHHHHCEEEECCCCCCCEEEEECCCCCHHHCCHHCCCCHHHHHHHCCCCEEE
LTYRAGQGGQVATEDLAAAITWIFRNAEELGVGTDGYSLWGSSAGARMAAYIGSHGPAAF
EEEECCCCCCCHHHHHHHHHHHHHHCHHHHCCCCCCHHHCCCCCCCHHHHHHCCCCCCCC
GGANLPKPAAVVMAYTSHSDLAETEPPTFVVVGERDGIAPPGNMERRIAALRRIGTPVEY
CCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCEEE
HLFPNVGHGFGAGTGTSAEGWIAEAVRFWRQQL
EECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MRRTFCLIPFLLALAPLAAAEERPAGEVAMIAEQSVEVLGEHLTADGRLADILDNPAFAG
CCCHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHH
FAERILPWAGRRYDPAMPLGQMASLLPYHSAVDTGTVVAALNRMIDDAGAGQTVFYDIYS
HHHHHHHHCCCCCCCCCCHHHHHHHHCHHHHCCHHHHHHHHHHHHHHCCCCCEEEEHHHH
EAERRADPAKAATGLFFYRGRPGAPFAVIAPGGGFSYVGSVHEGFPYAEAISDLGLNAFV
HHHHCCCHHHHHHCEEEECCCCCCCEEEEECCCCCHHHCCHHCCCCHHHHHHHCCCCEEE
LTYRAGQGGQVATEDLAAAITWIFRNAEELGVGTDGYSLWGSSAGARMAAYIGSHGPAAF
EEEECCCCCCCHHHHHHHHHHHHHHCHHHHCCCCCCHHHCCCCCCCHHHHHHCCCCCCCC
GGANLPKPAAVVMAYTSHSDLAETEPPTFVVVGERDGIAPPGNMERRIAALRRIGTPVEY
CCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCEEE
HLFPNVGHGFGAGTGTSAEGWIAEAVRFWRQQL
EECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA