| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is 119385962
Identifier: 119385962
GI number: 119385962
Start: 405618
End: 406619
Strand: Direct
Name: 119385962
Synonym: Pden_3240
Alternate gene names: NA
Gene position: 405618-406619 (Clockwise)
Preceding gene: 119385961
Following gene: 119385963
Centisome position: 23.44
GC content: 67.17
Gene sequence:
>1002_bases ATGCGAAGAACATTCTGTCTGATCCCGTTTCTGCTCGCGCTGGCACCGCTCGCCGCCGCGGAAGAACGGCCTGCCGGGGA GGTTGCCATGATCGCGGAACAAAGCGTCGAGGTTCTGGGCGAGCATCTGACAGCCGACGGGCGGCTAGCCGACATTCTCG ACAATCCCGCCTTTGCCGGATTTGCCGAGCGCATCCTGCCTTGGGCAGGCCGCCGCTACGACCCCGCAATGCCGCTCGGC CAGATGGCCAGTCTGCTGCCCTATCATAGCGCCGTCGATACCGGCACGGTCGTCGCTGCCCTGAACCGGATGATCGACGA CGCGGGCGCCGGTCAGACGGTGTTCTACGACATCTACTCCGAAGCGGAGAGGCGGGCCGACCCCGCCAAAGCCGCGACCG GCCTGTTCTTCTACCGGGGCCGCCCCGGTGCCCCCTTCGCGGTGATCGCGCCGGGCGGCGGCTTCTCCTATGTCGGTTCG GTGCATGAGGGCTTCCCCTATGCAGAGGCGATCAGCGATCTCGGGCTGAACGCCTTCGTCCTGACCTATCGTGCTGGCCA GGGCGGTCAGGTCGCCACCGAGGATCTGGCCGCTGCAATCACCTGGATTTTCCGCAACGCGGAAGAACTGGGTGTCGGCA CCGACGGCTATTCCCTGTGGGGCAGTTCGGCGGGCGCCCGGATGGCGGCCTATATCGGCTCGCACGGGCCTGCCGCCTTC GGTGGGGCCAATCTGCCGAAGCCGGCTGCCGTCGTCATGGCCTATACCAGCCATTCCGATCTGGCCGAGACAGAGCCGCC GACCTTCGTGGTCGTGGGCGAACGGGACGGCATCGCCCCGCCCGGCAACATGGAGCGCCGGATCGCCGCCCTGCGCCGGA TCGGCACGCCGGTCGAATATCACCTCTTTCCCAATGTCGGTCACGGCTTCGGGGCCGGCACCGGCACCAGCGCCGAGGGC TGGATCGCCGAGGCCGTTCGTTTCTGGCGGCAGCAATTGTGA
Upstream 100 bases:
>100_bases TATATTTCTGTCAGGCACGACGGATGCTCGTGACGCGCGATGGCGCATCGGTGAGCCGAGGCGGCATTCCCGCCTGATCG AGGCCCGGAGAACACAACAC
Downstream 100 bases:
>100_bases GGGGCGCAAGCGCGAAAGGAAGAAAAGCCATGGACAGAATCCGACGGGCAATGCTGCGCTTCATCCCAATATGGGCTGTC GGGCTCCTCGCCGCACTAAG
Product: hypothetical protein
Products: NA
Alternate protein names: Alpha/Beta Hydrolase; Acetyl Esterase Family; Esterase; Gdsl-Like Lipase/Acylhydrolase; Endo-1 4-Beta-Xylanase B; Esterase/Lipase
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MRRTFCLIPFLLALAPLAAAEERPAGEVAMIAEQSVEVLGEHLTADGRLADILDNPAFAGFAERILPWAGRRYDPAMPLG QMASLLPYHSAVDTGTVVAALNRMIDDAGAGQTVFYDIYSEAERRADPAKAATGLFFYRGRPGAPFAVIAPGGGFSYVGS VHEGFPYAEAISDLGLNAFVLTYRAGQGGQVATEDLAAAITWIFRNAEELGVGTDGYSLWGSSAGARMAAYIGSHGPAAF GGANLPKPAAVVMAYTSHSDLAETEPPTFVVVGERDGIAPPGNMERRIAALRRIGTPVEYHLFPNVGHGFGAGTGTSAEG WIAEAVRFWRQQL
Sequences:
>Translated_333_residues MRRTFCLIPFLLALAPLAAAEERPAGEVAMIAEQSVEVLGEHLTADGRLADILDNPAFAGFAERILPWAGRRYDPAMPLG QMASLLPYHSAVDTGTVVAALNRMIDDAGAGQTVFYDIYSEAERRADPAKAATGLFFYRGRPGAPFAVIAPGGGFSYVGS VHEGFPYAEAISDLGLNAFVLTYRAGQGGQVATEDLAAAITWIFRNAEELGVGTDGYSLWGSSAGARMAAYIGSHGPAAF GGANLPKPAAVVMAYTSHSDLAETEPPTFVVVGERDGIAPPGNMERRIAALRRIGTPVEYHLFPNVGHGFGAGTGTSAEG WIAEAVRFWRQQL >Mature_333_residues MRRTFCLIPFLLALAPLAAAEERPAGEVAMIAEQSVEVLGEHLTADGRLADILDNPAFAGFAERILPWAGRRYDPAMPLG QMASLLPYHSAVDTGTVVAALNRMIDDAGAGQTVFYDIYSEAERRADPAKAATGLFFYRGRPGAPFAVIAPGGGFSYVGS VHEGFPYAEAISDLGLNAFVLTYRAGQGGQVATEDLAAAITWIFRNAEELGVGTDGYSLWGSSAGARMAAYIGSHGPAAF GGANLPKPAAVVMAYTSHSDLAETEPPTFVVVGERDGIAPPGNMERRIAALRRIGTPVEYHLFPNVGHGFGAGTGTSAEG WIAEAVRFWRQQL
Specific function: Unknown
COG id: COG0657
COG function: function code I; Esterase/lipase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35190; Mature: 35190
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRTFCLIPFLLALAPLAAAEERPAGEVAMIAEQSVEVLGEHLTADGRLADILDNPAFAG CCCHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHH FAERILPWAGRRYDPAMPLGQMASLLPYHSAVDTGTVVAALNRMIDDAGAGQTVFYDIYS HHHHHHHHCCCCCCCCCCHHHHHHHHCHHHHCCHHHHHHHHHHHHHHCCCCCEEEEHHHH EAERRADPAKAATGLFFYRGRPGAPFAVIAPGGGFSYVGSVHEGFPYAEAISDLGLNAFV HHHHCCCHHHHHHCEEEECCCCCCCEEEEECCCCCHHHCCHHCCCCHHHHHHHCCCCEEE LTYRAGQGGQVATEDLAAAITWIFRNAEELGVGTDGYSLWGSSAGARMAAYIGSHGPAAF EEEECCCCCCCHHHHHHHHHHHHHHCHHHHCCCCCCHHHCCCCCCCHHHHHHCCCCCCCC GGANLPKPAAVVMAYTSHSDLAETEPPTFVVVGERDGIAPPGNMERRIAALRRIGTPVEY CCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCEEE HLFPNVGHGFGAGTGTSAEGWIAEAVRFWRQQL EECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MRRTFCLIPFLLALAPLAAAEERPAGEVAMIAEQSVEVLGEHLTADGRLADILDNPAFAG CCCHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHH FAERILPWAGRRYDPAMPLGQMASLLPYHSAVDTGTVVAALNRMIDDAGAGQTVFYDIYS HHHHHHHHCCCCCCCCCCHHHHHHHHCHHHHCCHHHHHHHHHHHHHHCCCCCEEEEHHHH EAERRADPAKAATGLFFYRGRPGAPFAVIAPGGGFSYVGSVHEGFPYAEAISDLGLNAFV HHHHCCCHHHHHHCEEEECCCCCCCEEEEECCCCCHHHCCHHCCCCHHHHHHHCCCCEEE LTYRAGQGGQVATEDLAAAITWIFRNAEELGVGTDGYSLWGSSAGARMAAYIGSHGPAAF EEEECCCCCCCHHHHHHHHHHHHHHCHHHHCCCCCCHHHCCCCCCCHHHHHHCCCCCCCC GGANLPKPAAVVMAYTSHSDLAETEPPTFVVVGERDGIAPPGNMERRIAALRRIGTPVEY CCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCEEE HLFPNVGHGFGAGTGTSAEGWIAEAVRFWRQQL EECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA