Definition Paracoccus denitrificans PD1222 chromosome 2, complete sequence.
Accession NC_008687
Length 1,730,097

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The map label for this gene is 119385897

Identifier: 119385897

GI number: 119385897

Start: 344690

End: 345589

Strand: Direct

Name: 119385897

Synonym: Pden_3175

Alternate gene names: NA

Gene position: 344690-345589 (Clockwise)

Preceding gene: 119385896

Following gene: 119385900

Centisome position: 19.92

GC content: 65.33

Gene sequence:

>900_bases
ATGACCAATACGCCAGATTTGCTACGACTGATCGCGACAGTCTTCATCGCGGTGACCTGCGTGGTCATCGGGGATACGGC
GGGCAAGCTGCTGACCGGCGGCGGCGTGGATCCCTTCATCGTGGCATGGTCGCGGTTCTTCCTGGCCGCGCTGATGCTGC
TTCCCTTCAGCGGCTTGACCCGGCGGGAACTGCCGGCATTGCTGGACTGGCGCGTCCTGCTGAGGGCCGGGCTTATCGCC
AGCGGCATATGCTGCATCCTGACCGCCCTGAAGACAGAACCGATCGCCAATGTCTTCGGCGCCTTCTTCGTCGGCCCGGT
CGTGTCCTATGTCCTGGCGATCCTGTTTCTGGGCGAGCGGCCATCGGCGCCAAGAAGCCTGCTACTGGGGCTCGGCTTCG
CGGGCGTGATGCTGGTGGTCAAGCCTGGTTTCGGCAGTTCCGCCGGCATGGGTTTCGCCCTGGCGGCGGGAACATTCTAC
GGCGCCTATCTGGTCATGACCCGCACCCTGGCGGGAAGATTCCGGCCGCGATTCCTGCTGATCTCGCAATTGCTGATCGG
GGCCGTCGTCCTGACGCCCTTCGGGTTGCAAGCCGATTTTCCCGTGCCGGACGTGCCCTTGCTGGTGCTGCTTCTGATCA
GCGCCGTCGGTTCGGCCGTGGGCAACTTCCTGCTGGTCATGGCCAGCAGGACGGCCGAGGCCAGCCTGATCGCGCCCCTG
GTCTACAGCCAGTTGATTTCGGCCACGGCGCTGGGGATCGTCGTCTTCGGCGAATGGCCCGATCTCGTATCACTGGCGGG
GCTGGTGTTGATCGCGATCTCGGGGCTGGGCTCGCTGCTGGTTCACCAGCGTGCGGGCAGGGGGCGCCTATCGACCCCGC
CTTGCCCGCGCACGCTGTGA

Upstream 100 bases:

>100_bases
TCGGGGCTTTCGGGATGGTGGCCTTCCAATCCTTCGCGCAAGGTCGCAAGGTCTGCCCCGGGCCAGATGCCCGCCTCAAT
TCCGCTTCCTGAGAACGATC

Downstream 100 bases:

>100_bases
TGTCGCTGGACGTCTGGAACCGCCCGCATGGAACCTCGGTAATCCTGCGTCGTCGGAAGGACGCGCGGTCCCGCCGTCTT
CCGCAGGCGCCTTTGCGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MTNTPDLLRLIATVFIAVTCVVIGDTAGKLLTGGGVDPFIVAWSRFFLAALMLLPFSGLTRRELPALLDWRVLLRAGLIA
SGICCILTALKTEPIANVFGAFFVGPVVSYVLAILFLGERPSAPRSLLLGLGFAGVMLVVKPGFGSSAGMGFALAAGTFY
GAYLVMTRTLAGRFRPRFLLISQLLIGAVVLTPFGLQADFPVPDVPLLVLLLISAVGSAVGNFLLVMASRTAEASLIAPL
VYSQLISATALGIVVFGEWPDLVSLAGLVLIAISGLGSLLVHQRAGRGRLSTPPCPRTL

Sequences:

>Translated_299_residues
MTNTPDLLRLIATVFIAVTCVVIGDTAGKLLTGGGVDPFIVAWSRFFLAALMLLPFSGLTRRELPALLDWRVLLRAGLIA
SGICCILTALKTEPIANVFGAFFVGPVVSYVLAILFLGERPSAPRSLLLGLGFAGVMLVVKPGFGSSAGMGFALAAGTFY
GAYLVMTRTLAGRFRPRFLLISQLLIGAVVLTPFGLQADFPVPDVPLLVLLLISAVGSAVGNFLLVMASRTAEASLIAPL
VYSQLISATALGIVVFGEWPDLVSLAGLVLIAISGLGSLLVHQRAGRGRLSTPPCPRTL
>Mature_298_residues
TNTPDLLRLIATVFIAVTCVVIGDTAGKLLTGGGVDPFIVAWSRFFLAALMLLPFSGLTRRELPALLDWRVLLRAGLIAS
GICCILTALKTEPIANVFGAFFVGPVVSYVLAILFLGERPSAPRSLLLGLGFAGVMLVVKPGFGSSAGMGFALAAGTFYG
AYLVMTRTLAGRFRPRFLLISQLLIGAVVLTPFGLQADFPVPDVPLLVLLLISAVGSAVGNFLLVMASRTAEASLIAPLV
YSQLISATALGIVVFGEWPDLVSLAGLVLIAISGLGSLLVHQRAGRGRLSTPPCPRTL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31291; Mature: 31160

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNTPDLLRLIATVFIAVTCVVIGDTAGKLLTGGGVDPFIVAWSRFFLAALMLLPFSGLT
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCC
RRELPALLDWRVLLRAGLIASGICCILTALKTEPIANVFGAFFVGPVVSYVLAILFLGER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PSAPRSLLLGLGFAGVMLVVKPGFGSSAGMGFALAAGTFYGAYLVMTRTLAGRFRPRFLL
CCCHHHHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
ISQLLIGAVVLTPFGLQADFPVPDVPLLVLLLISAVGSAVGNFLLVMASRTAEASLIAPL
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
VYSQLISATALGIVVFGEWPDLVSLAGLVLIAISGLGSLLVHQRAGRGRLSTPPCPRTL
HHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TNTPDLLRLIATVFIAVTCVVIGDTAGKLLTGGGVDPFIVAWSRFFLAALMLLPFSGLT
CCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCC
RRELPALLDWRVLLRAGLIASGICCILTALKTEPIANVFGAFFVGPVVSYVLAILFLGER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PSAPRSLLLGLGFAGVMLVVKPGFGSSAGMGFALAAGTFYGAYLVMTRTLAGRFRPRFLL
CCCHHHHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
ISQLLIGAVVLTPFGLQADFPVPDVPLLVLLLISAVGSAVGNFLLVMASRTAEASLIAPL
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
VYSQLISATALGIVVFGEWPDLVSLAGLVLIAISGLGSLLVHQRAGRGRLSTPPCPRTL
HHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA