Definition Paracoccus denitrificans PD1222 chromosome 2, complete sequence.
Accession NC_008687
Length 1,730,097

Click here to switch to the map view.

The map label for this gene is 119385892

Identifier: 119385892

GI number: 119385892

Start: 342529

End: 342795

Strand: Direct

Name: 119385892

Synonym: Pden_3170

Alternate gene names: NA

Gene position: 342529-342795 (Clockwise)

Preceding gene: 119385891

Following gene: 119385894

Centisome position: 19.8

GC content: 65.92

Gene sequence:

>267_bases
ATGACCGCAGCCGAACGCACTGCCCGCCGCCTCGCCAATGCCGCGACCCTCGCCACCGCCTTTGCCGAGGGTCGATTCCG
CAAGGTGACGGTGAGGGAAGCATGGGGCCTCGGATGGGACGCCGAGGCCGATGAGCCGGAGGTTTTCGCCGAATGCGGGT
TGCACGCGATCCTGAACGCCGATCGTACCGAGATCCAGATGATGGCCGACGACGACGGCGAATGCTGGACCATCCAGATC
GCGAGCGGAGAGTTTTGCCCCGCCTGA

Upstream 100 bases:

>100_bases
AGCGAGATCGAGAGCGCCTGACCCCACCGGTGCTGACAGCCCGGCCCCGCCATCACGGGGCTTGCGGCAGCAGGAAACCA
CCCTACCGGGAGAAACTGAC

Downstream 100 bases:

>100_bases
CCCTCCACCGGGACCAGAGATCCCGCCGAGACAAATGGACCTGCGAGCTCATGCATCCGGCTTGTGCGGCAGGCAAGTGC
CCGCTGGAAACGCAGCGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 87

Protein sequence:

>88_residues
MTAAERTARRLANAATLATAFAEGRFRKVTVREAWGLGWDAEADEPEVFAECGLHAILNADRTEIQMMADDDGECWTIQI
ASGEFCPA

Sequences:

>Translated_88_residues
MTAAERTARRLANAATLATAFAEGRFRKVTVREAWGLGWDAEADEPEVFAECGLHAILNADRTEIQMMADDDGECWTIQI
ASGEFCPA
>Mature_87_residues
TAAERTARRLANAATLATAFAEGRFRKVTVREAWGLGWDAEADEPEVFAECGLHAILNADRTEIQMMADDDGECWTIQIA
SGEFCPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9620; Mature: 9489

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAAERTARRLANAATLATAFAEGRFRKVTVREAWGLGWDAEADEPEVFAECGLHAILNA
CCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHCCCCCCCCCCCCCHHHHHCCCCEECCC
DRTEIQMMADDDGECWTIQIASGEFCPA
CCCEEEEEECCCCCEEEEEECCCCCCCC
>Mature Secondary Structure 
TAAERTARRLANAATLATAFAEGRFRKVTVREAWGLGWDAEADEPEVFAECGLHAILNA
CCHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHCCCCCCCCCCCCCHHHHHCCCCEECCC
DRTEIQMMADDDGECWTIQIASGEFCPA
CCCEEEEEECCCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA