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The map label for this gene is hupF [H]

Identifier: 119385824

GI number: 119385824

Start: 288304

End: 288615

Strand: Direct

Name: hupF [H]

Synonym: Pden_3102

Alternate gene names: 119385824

Gene position: 288304-288615 (Clockwise)

Preceding gene: 119385823

Following gene: 119385825

Centisome position: 16.66

GC content: 70.19

Gene sequence:

>312_bases
ATGTGCATGGGCATCCCGATGCGGCTGGCGCAGGTCGACGGCATCGCGGGGCAAAGCGAGGGCGGCGATCTGATCGACCT
CAGCCTGACCGCCGATGCGCAAGCCGGCGACTGGGTGCTGACCTTCCTCGGCACGGCGCATGAGGTGATCGACGCTGACC
GCGCCGCACGGATCGCGGCGGCATTGCAGGGGTTGCGGGCGGTCATGGCGGGGGGCGACGCTTCGGGCGCCTTTGCCGAT
CTCGAGGGTCGCACCCCGGCGCTTCCGTCCCATCTTCAGGCGGCGTTGGCCGCAGGCCGCAAAACGGGTTGA

Upstream 100 bases:

>100_bases
CGGATCCGGCGATCCGGCGCGAGGCCTATGAGACGGGCCGCCCCGCCGCCTCTGATGCCTGCCGCGAGGGCGATGCGCGC
TTTTTCCCGGGGGCCGGCTG

Downstream 100 bases:

>100_bases
CCCATGCATGACCATTCCCACGACATTCTGCACAGCCCCGGCGGGGGCGCCCTGCACCCGCTGCTGGCGCGGCTGGAGGC
CGAATTCGGCTGGCCACGCC

Product: hydrogenase expression/formation protein (HUPF/HYPC)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MCMGIPMRLAQVDGIAGQSEGGDLIDLSLTADAQAGDWVLTFLGTAHEVIDADRAARIAAALQGLRAVMAGGDASGAFAD
LEGRTPALPSHLQAALAAGRKTG

Sequences:

>Translated_103_residues
MCMGIPMRLAQVDGIAGQSEGGDLIDLSLTADAQAGDWVLTFLGTAHEVIDADRAARIAAALQGLRAVMAGGDASGAFAD
LEGRTPALPSHLQAALAAGRKTG
>Mature_103_residues
MCMGIPMRLAQVDGIAGQSEGGDLIDLSLTADAQAGDWVLTFLGTAHEVIDADRAARIAAALQGLRAVMAGGDASGAFAD
LEGRTPALPSHLQAALAAGRKTG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hupF/hypC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019812
- InterPro:   IPR001109 [H]

Pfam domain/function: PF01455 HupF_HypC [H]

EC number: NA

Molecular weight: Translated: 10358; Mature: 10358

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCMGIPMRLAQVDGIAGQSEGGDLIDLSLTADAQAGDWVLTFLGTAHEVIDADRAARIAA
CCCCCCCHHHHHCCCCCCCCCCCEEEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHH
ALQGLRAVMAGGDASGAFADLEGRTPALPSHLQAALAAGRKTG
HHHHHHHHHCCCCCCCCEECCCCCCCCCHHHHHHHHHCCCCCC
>Mature Secondary Structure
MCMGIPMRLAQVDGIAGQSEGGDLIDLSLTADAQAGDWVLTFLGTAHEVIDADRAARIAA
CCCCCCCHHHHHCCCCCCCCCCCEEEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHH
ALQGLRAVMAGGDASGAFADLEGRTPALPSHLQAALAAGRKTG
HHHHHHHHHCCCCCCCCEECCCCCCCCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8497190 [H]