| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is 119385800
Identifier: 119385800
GI number: 119385800
Start: 259693
End: 260769
Strand: Direct
Name: 119385800
Synonym: Pden_3078
Alternate gene names: NA
Gene position: 259693-260769 (Clockwise)
Preceding gene: 119385799
Following gene: 119385801
Centisome position: 15.01
GC content: 67.41
Gene sequence:
>1077_bases ATGTCCGACGCCACCACCCATCTCCTGCTGCCCTACATTCTGGCGGCGCAGGCCCAGAAGCATGTCACCCACAACGAGGC GCTGCGGCTGCTCGACGGGCTCGTGCAGCTCTCGGTTCTAGACCGGGATCTGACCGCGCCTCCCGGCAGCCCCGCCGACG GTGACCGCTACATTGTGGCGTCGGGCGCCATCGGGGCGTGGACAGGCTGGGACCTGAACGTCGCGCTCTGGACCGACGGG GCCTGGCTTCGCCTTCCGCCACGGACCGGCTGGCGGGCGTGGGTCGAGGACGAGGGGCTGCTGCTGGTCTACGACGGCGC AGGCTGGGTCGGGACCACTCCCGCTGCGCTGCAGAACCTTGCGTTGCTGGGGCTGGGCACCACGGCCGACCCGGCCAATC CGTTCTCGGCCAAGCTCAACGCCGCGCTCTGGACCGCGAAGACTGTCGCGGAAGGCGGCACGGGCGATCTCTTCTACACC ATGAACAAGGAAGCCGCCGGTCGCGACCTCGGGCTTACCTTCCAGACCGGCTATGTCACCAAGGCGCTGATGGGCCTGTT CGGTTCGGACAGGTTCCGGCTCGCGGTCTCCGCCGACGGCAGCACCTTCTTCGATGGGCTGATCGTCGACAACGCGACCG GCATCGTCGACCAGCCCCGGCTGCCGCGCTTCAAGGGCCATACCAACTACGACAACTATGTCGCCGTCGACACCTGGACG AAGATCGGCATCAACAACACCGACTATAACGACCAGAGCGCGTTCGACGCCGGCAACAACCATTTCGTTGCGCCCGCCGC AGGCACCTACCTCTTCGGCGCCACGCTGCTCTACAAGGTCAACGCCAGCACCAATGCGCGCATGCGCGGGCGGCTGGTGC TGAACGGCTCGACGGAGATCTGGGGATCGCGGGGCGAGGTTTCCGGGGCGCACGCCTCCGAGGCGACGGCGCTCTGGCTG CAGACCATGGTCCCGCTCGCGCAAGGCGACACGGTCGAACTGCAGGGCACCTTCCGCGCGGCGGACGGGTATTTCGCTGC CGATCACACGAGCTTTTGGGGCGCGAAGATCGGCTGA
Upstream 100 bases:
>100_bases GGCCCCGGCAACACCCTCACCATTCGCATCTTCCAGCTCTCCGCCCTCGTCGGGCGGGGCGCGGCGCAGATCGTCACCCT CACCTTCTGAAGGCCATCCC
Downstream 100 bases:
>100_bases GCGGCGGGAGGGGGATAGGTGAAAGACGGGCCGAGGATCTTTCCGCAGGAGACATGAGGCGCCTCGACCGCAGCGTCACG CCCGGCCCGGTTCACGGATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 358; Mature: 357
Protein sequence:
>358_residues MSDATTHLLLPYILAAQAQKHVTHNEALRLLDGLVQLSVLDRDLTAPPGSPADGDRYIVASGAIGAWTGWDLNVALWTDG AWLRLPPRTGWRAWVEDEGLLLVYDGAGWVGTTPAALQNLALLGLGTTADPANPFSAKLNAALWTAKTVAEGGTGDLFYT MNKEAAGRDLGLTFQTGYVTKALMGLFGSDRFRLAVSADGSTFFDGLIVDNATGIVDQPRLPRFKGHTNYDNYVAVDTWT KIGINNTDYNDQSAFDAGNNHFVAPAAGTYLFGATLLYKVNASTNARMRGRLVLNGSTEIWGSRGEVSGAHASEATALWL QTMVPLAQGDTVELQGTFRAADGYFAADHTSFWGAKIG
Sequences:
>Translated_358_residues MSDATTHLLLPYILAAQAQKHVTHNEALRLLDGLVQLSVLDRDLTAPPGSPADGDRYIVASGAIGAWTGWDLNVALWTDG AWLRLPPRTGWRAWVEDEGLLLVYDGAGWVGTTPAALQNLALLGLGTTADPANPFSAKLNAALWTAKTVAEGGTGDLFYT MNKEAAGRDLGLTFQTGYVTKALMGLFGSDRFRLAVSADGSTFFDGLIVDNATGIVDQPRLPRFKGHTNYDNYVAVDTWT KIGINNTDYNDQSAFDAGNNHFVAPAAGTYLFGATLLYKVNASTNARMRGRLVLNGSTEIWGSRGEVSGAHASEATALWL QTMVPLAQGDTVELQGTFRAADGYFAADHTSFWGAKIG >Mature_357_residues SDATTHLLLPYILAAQAQKHVTHNEALRLLDGLVQLSVLDRDLTAPPGSPADGDRYIVASGAIGAWTGWDLNVALWTDGA WLRLPPRTGWRAWVEDEGLLLVYDGAGWVGTTPAALQNLALLGLGTTADPANPFSAKLNAALWTAKTVAEGGTGDLFYTM NKEAAGRDLGLTFQTGYVTKALMGLFGSDRFRLAVSADGSTFFDGLIVDNATGIVDQPRLPRFKGHTNYDNYVAVDTWTK IGINNTDYNDQSAFDAGNNHFVAPAAGTYLFGATLLYKVNASTNARMRGRLVLNGSTEIWGSRGEVSGAHASEATALWLQ TMVPLAQGDTVELQGTFRAADGYFAADHTSFWGAKIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38275; Mature: 38144
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDATTHLLLPYILAAQAQKHVTHNEALRLLDGLVQLSVLDRDLTAPPGSPADGDRYIVA CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCEEEEE SGAIGAWTGWDLNVALWTDGAWLRLPPRTGWRAWVEDEGLLLVYDGAGWVGTTPAALQNL ECCCCCCCCCEEEEEEEECCCEEECCCCCCCEEEECCCCEEEEECCCCCCCCCHHHHHCE ALLGLGTTADPANPFSAKLNAALWTAKTVAEGGTGDLFYTMNKEAAGRDLGLTFQTGYVT EEEECCCCCCCCCCCHHHCCEEEEEEHHHCCCCCCCEEEEECCCCCCCCCEEEEECCHHH KALMGLFGSDRFRLAVSADGSTFFDGLIVDNATGIVDQPRLPRFKGHTNYDNYVAVDTWT HHHHHHCCCCEEEEEEECCCCEEECEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECEE KIGINNTDYNDQSAFDAGNNHFVAPAAGTYLFGATLLYKVNASTNARMRGRLVLNGSTEI EECCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEEEEECCCCCCEEEEEEEECCCCCC WGSRGEVSGAHASEATALWLQTMVPLAQGDTVELQGTFRAADGYFAADHTSFWGAKIG CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEECCCEEEECCCCCCCCCCC >Mature Secondary Structure SDATTHLLLPYILAAQAQKHVTHNEALRLLDGLVQLSVLDRDLTAPPGSPADGDRYIVA CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCEEEEE SGAIGAWTGWDLNVALWTDGAWLRLPPRTGWRAWVEDEGLLLVYDGAGWVGTTPAALQNL ECCCCCCCCCEEEEEEEECCCEEECCCCCCCEEEECCCCEEEEECCCCCCCCCHHHHHCE ALLGLGTTADPANPFSAKLNAALWTAKTVAEGGTGDLFYTMNKEAAGRDLGLTFQTGYVT EEEECCCCCCCCCCCHHHCCEEEEEEHHHCCCCCCCEEEEECCCCCCCCCEEEEECCHHH KALMGLFGSDRFRLAVSADGSTFFDGLIVDNATGIVDQPRLPRFKGHTNYDNYVAVDTWT HHHHHHCCCCEEEEEEECCCCEEECEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECEE KIGINNTDYNDQSAFDAGNNHFVAPAAGTYLFGATLLYKVNASTNARMRGRLVLNGSTEI EECCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEEEEECCCCCCEEEEEEEECCCCCC WGSRGEVSGAHASEATALWLQTMVPLAQGDTVELQGTFRAADGYFAADHTSFWGAKIG CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEECCCEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA